EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0023072 (Gene tree)
Gene ID
110285507
Gene Symbol
Smndc1
Alias
-
Full Name
survival motor neuron domain containing 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
11267 bases
Position
chr19:49877421-49888687
Accession
110285507
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0049132SMNPF06003.123.3e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0049132-2137XM_021151733MGP_CAROLIEiJ_P0049132238 (aa)XP_021007392UPI00001CEC4B
Gene Model
Click here to download MGP_CAROLIEiJ_G0023072's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023072's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0023072Smndc110099.160ENSG00000119953SMNDC110099.160Homo_sapiens
MGP_CAROLIEiJ_G0023072Smndc110076.569ENSAPOG00000021772smndc110075.210Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSAMEG00000005251SMNDC110098.739Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023072Smndc110076.569ENSACIG00000004819smndc110076.569Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023072Smndc110076.569ENSAOCG00000017869smndc110076.569Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023072Smndc110076.569ENSAPEG00000007752smndc110076.569Amphiprion_percula
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSATEG00000006830smndc110076.050Anabas_testudineus
MGP_CAROLIEiJ_G0023072Smndc18394.949ENSAPLG00000004322SMNDC110094.949Anas_platyrhynchos
MGP_CAROLIEiJ_G0023072Smndc110094.958ENSACAG00000005983SMNDC110094.958Anolis_carolinensis
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSANAG00000032875SMNDC110098.739Aotus_nancymaae
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSACLG00000016360smndc110075.630Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSAMXG00000020310smndc110075.630Astyanax_mexicanus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSBTAG00000000551SMNDC110098.319Bos_taurus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCJAG00000018624SMNDC110098.739Callithrix_jacchus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCAFG00000010720SMNDC110098.739Canis_familiaris
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCAFG00020011913SMNDC110098.739Canis_lupus_dingo
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSCHIG00000010604SMNDC110098.319Capra_hircus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSTSYG00000026454SMNDC110098.319Carlito_syrichta
MGP_CAROLIEiJ_G0023072Smndc110083.750ENSCAPG00000009132SMNDC110098.507Cavia_aperea
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCPOG00000031666SMNDC110098.739Cavia_porcellus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCCAG00000021793SMNDC110098.739Cebus_capucinus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSCATG00000035910SMNDC110098.319Cercocebus_atys
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSCLAG00000002838SMNDC110098.319Chinchilla_lanigera
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCSAG00000005169SMNDC110098.739Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023072Smndc18197.927ENSCHOG00000002936SMNDC110097.927Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023072Smndc110096.639ENSCPBG00000012837SMNDC110096.639Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023072Smndc110078.151ENSCANG00000036994-10078.151Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSCANG00000031720-10098.739Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023072Smndc110091.176ENSCANG00000034620-10091.176Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023072Smndc110097.899ENSCGRG00001012973Smndc110097.899Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023072Smndc110097.899ENSCGRG00000012396Smndc110097.899Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSCSEG00000015621smndc110076.050Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023072Smndc110076.891ENSCVAG00000020432smndc110076.891Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023072Smndc110078.992ENSDARG00000056235smndc110078.992Danio_rerio
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSDNOG00000016387SMNDC18398.739Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSDORG00000023715Smndc110098.739Dipodomys_ordii
MGP_CAROLIEiJ_G0023072Smndc19541.767FBgn0039977CG174549842.972Drosophila_melanogaster
MGP_CAROLIEiJ_G0023072Smndc110071.369ENSEBUG00000010929smndc110071.369Eptatretus_burgeri
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSEASG00005014930SMNDC110098.739Equus_asinus_asinus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSECAG00000029973SMNDC110098.739Equus_caballus
MGP_CAROLIEiJ_G0023072Smndc18369.192ENSEEUG00000013407-10069.192Erinaceus_europaeus
MGP_CAROLIEiJ_G0023072Smndc110077.311ENSELUG00000000227smndc110077.311Esox_lucius
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSFCAG00000027353SMNDC110098.739Felis_catus
MGP_CAROLIEiJ_G0023072Smndc110094.958ENSFALG00000002306SMNDC110094.958Ficedula_albicollis
MGP_CAROLIEiJ_G0023072Smndc110099.160ENSFDAG00000006468SMNDC110099.160Fukomys_damarensis
MGP_CAROLIEiJ_G0023072Smndc110076.471ENSFHEG00000020150smndc110076.471Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023072Smndc110076.891ENSGMOG00000016585smndc110076.891Gadus_morhua
MGP_CAROLIEiJ_G0023072Smndc110094.958ENSGALG00000008561SMNDC110094.958Gallus_gallus
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSGAFG00000011582smndc110075.210Gambusia_affinis
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSGACG00000009468smndc110075.630Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023072Smndc110096.639ENSGAGG00000024547SMNDC110096.639Gopherus_agassizii
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSGGOG00000010071SMNDC110098.739Gorilla_gorilla
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSHBUG00000017596smndc110075.630Haplochromis_burtoni
MGP_CAROLIEiJ_G0023072Smndc110099.160ENSHGLG00000013390-10099.160Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023072Smndc110068.443ENSHGLG00000001157-10065.306Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023072Smndc110076.639ENSHGLG00100004278-10076.230Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023072Smndc110099.160ENSHGLG00100004814-10099.160Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023072Smndc110074.895ENSHCOG00000000783smndc110074.895Hippocampus_comes
MGP_CAROLIEiJ_G0023072Smndc110076.891ENSIPUG00000004217smndc110076.891Ictalurus_punctatus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSSTOG00000006088SMNDC110098.319Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSJJAG00000019974Smndc110098.739Jaculus_jaculus
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSKMAG00000020134smndc110075.210Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023072Smndc110074.370ENSLBEG00000004598smndc110074.370Labrus_bergylta
MGP_CAROLIEiJ_G0023072Smndc110083.613ENSLACG00000007784SMNDC110083.613Latimeria_chalumnae
MGP_CAROLIEiJ_G0023072Smndc110084.454ENSLOCG00000012355smndc110084.454Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSLAFG00000014353SMNDC110098.319Loxodonta_africana
MGP_CAROLIEiJ_G0023072Smndc110081.092ENSMFAG00000038381-10081.092Macaca_fascicularis
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMFAG00000002433-10098.739Macaca_fascicularis
MGP_CAROLIEiJ_G0023072Smndc110081.092ENSMMUG00000045875-10081.092Macaca_mulatta
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMMUG00000007775SMNDC110098.739Macaca_mulatta
MGP_CAROLIEiJ_G0023072Smndc110087.395ENSMNEG00000033853-10087.395Macaca_nemestrina
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMNEG00000042963-10098.739Macaca_nemestrina
MGP_CAROLIEiJ_G0023072Smndc110092.469ENSMLEG00000040236SMNDC110092.050Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023072Smndc18973.239ENSMAMG00000018233smndc18773.239Mastacembelus_armatus
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSMZEG00005027510smndc110075.630Maylandia_zebra
MGP_CAROLIEiJ_G0023072Smndc18494.500ENSMGAG00000010777SMNDC18494.500Meleagris_gallopavo
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMAUG00000012243-10098.739Mesocricetus_auratus
MGP_CAROLIEiJ_G0023072Smndc19979.747ENSMAUG00000005459-9379.747Mesocricetus_auratus
MGP_CAROLIEiJ_G0023072Smndc110085.714ENSMICG00000031640-10085.714Microcebus_murinus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMICG00000027336-10098.739Microcebus_murinus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSMOCG00000002458Smndc110098.319Microtus_ochrogaster
MGP_CAROLIEiJ_G0023072Smndc110076.471ENSMMOG00000008856smndc110076.471Mola_mola
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMODG00000010542SMNDC110098.739Monodelphis_domestica
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSMALG00000017598smndc110076.050Monopterus_albus
MGP_CAROLIEiJ_G0023072Smndc110099.580ENSMUSG00000025024Smndc110099.580Mus_musculus
MGP_CAROLIEiJ_G0023072Smndc110099.160MGP_PahariEiJ_G0014560Smndc110099.160Mus_pahari
MGP_CAROLIEiJ_G0023072Smndc110099.580MGP_SPRETEiJ_G0023993Smndc110099.580Mus_spretus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSMPUG00000002089SMNDC110098.739Mustela_putorius_furo
MGP_CAROLIEiJ_G0023072Smndc110097.479ENSMLUG00000016007SMNDC110097.479Myotis_lucifugus
MGP_CAROLIEiJ_G0023072Smndc110097.899ENSNGAG00000006833Smndc110097.899Nannospalax_galili
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSNBRG00000017089smndc110075.210Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSNLEG00000015471SMNDC110098.739Nomascus_leucogenys
MGP_CAROLIEiJ_G0023072Smndc18258.000ENSMEUG00000010120-9958.500Notamacropus_eugenii
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSOPRG00000015348SMNDC110098.739Ochotona_princeps
MGP_CAROLIEiJ_G0023072Smndc110068.908ENSODEG00000007594-10065.966Octodon_degus
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSONIG00000000434smndc110075.210Oreochromis_niloticus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSOANG00000001598SMNDC110098.319Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSOCUG00000008145-10098.739Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023072Smndc110074.790ENSOCUG00000012274-10076.471Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSORLG00000005934smndc19575.630Oryzias_latipes
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSORLG00020008796smndc19575.630Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSORLG00015013666smndc110075.630Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023072Smndc110077.311ENSOMEG00000007590smndc110077.311Oryzias_melastigma
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSOGAG00000000571SMNDC110098.319Otolemur_garnettii
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSOARG00000009500SMNDC110098.319Ovis_aries
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPPAG00000027815SMNDC110098.739Pan_paniscus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPPRG00000013749SMNDC110098.739Panthera_pardus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPTIG00000011451SMNDC110098.739Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPTRG00000002937SMNDC110098.739Pan_troglodytes
MGP_CAROLIEiJ_G0023072Smndc110092.857ENSPANG00000031346-10092.857Papio_anubis
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPANG00000020805-10098.739Papio_anubis
MGP_CAROLIEiJ_G0023072Smndc110081.092ENSPKIG00000017164smndc110081.092Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023072Smndc110097.059ENSPSIG00000012257SMNDC110097.059Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023072Smndc110073.529ENSPMGG00000015651smndc110073.529Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPEMG00000022058Smndc110098.739Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023072Smndc110067.623ENSPMAG00000007705smndc110067.623Petromyzon_marinus
MGP_CAROLIEiJ_G0023072Smndc19762.174ENSPCIG00000009693-10062.174Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPCIG00000018419SMNDC110098.739Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSPFOG00000017113smndc110075.630Poecilia_formosa
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSPLAG00000010372smndc110076.050Poecilia_latipinna
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSPMEG00000012288smndc110076.050Poecilia_mexicana
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSPREG00000012279smndc110075.210Poecilia_reticulata
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSPPYG00000002643SMNDC110098.739Pongo_abelii
MGP_CAROLIEiJ_G0023072Smndc18197.927ENSPCAG00000016183SMNDC110097.927Procavia_capensis
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSPCOG00000024343SMNDC110098.319Propithecus_coquereli
MGP_CAROLIEiJ_G0023072Smndc110076.891ENSPVAG00000004368SMNDC110076.891Pteropus_vampyrus
MGP_CAROLIEiJ_G0023072Smndc19269.333ENSPNYG00000024093smndc18675.253Pundamilia_nyererei
MGP_CAROLIEiJ_G0023072Smndc110076.050ENSPNAG00000025285smndc110076.050Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023072Smndc1100100.000ENSRNOG00000014833Smndc1100100.000Rattus_norvegicus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSRBIG00000000224-10098.319Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023072Smndc110082.353ENSRBIG00000032452-10082.353Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSRROG00000044992-10098.739Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023072Smndc110082.773ENSRROG00000039125-10082.773Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSSBOG00000026789SMNDC110098.739Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSSHAG00000015189SMNDC110098.739Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023072Smndc110080.252ENSSFOG00015008311smndc110080.252Scleropages_formosus
MGP_CAROLIEiJ_G0023072Smndc110075.630ENSSMAG00000020118smndc110075.630Scophthalmus_maximus
MGP_CAROLIEiJ_G0023072Smndc110076.471ENSSDUG00000015330smndc110076.471Seriola_dumerili
MGP_CAROLIEiJ_G0023072Smndc110076.471ENSSLDG00000017325smndc110076.471Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSSARG00000006063SMNDC110098.319Sorex_araneus
MGP_CAROLIEiJ_G0023072Smndc110095.378ENSSPUG00000004574SMNDC110095.378Sphenodon_punctatus
MGP_CAROLIEiJ_G0023072Smndc110075.732ENSSPAG00000000338smndc110075.732Stegastes_partitus
MGP_CAROLIEiJ_G0023072Smndc110098.319ENSSSCG00000030507SMNDC110098.319Sus_scrofa
MGP_CAROLIEiJ_G0023072Smndc110094.958ENSTGUG00000010599SMNDC110094.958Taeniopygia_guttata
MGP_CAROLIEiJ_G0023072Smndc110073.950ENSTRUG00000023281smndc110073.950Takifugu_rubripes
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSTNIG00000013331smndc110075.210Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023072Smndc110099.160ENSTBEG00000014337SMNDC110099.160Tupaia_belangeri
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSUAMG00000008142SMNDC110098.739Ursus_americanus
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSUMAG00000023722SMNDC110098.739Ursus_maritimus
MGP_CAROLIEiJ_G0023072Smndc18397.980ENSVPAG00000003402SMNDC110097.980Vicugna_pacos
MGP_CAROLIEiJ_G0023072Smndc110098.739ENSVVUG00000007820SMNDC110098.739Vulpes_vulpes
MGP_CAROLIEiJ_G0023072Smndc16081.690ENSXETG00000015415SMNDC110081.690Xenopus_tropicalis
MGP_CAROLIEiJ_G0023072Smndc110075.210ENSXCOG00000009159smndc110075.210Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023072Smndc110074.790ENSXMAG00000012755smndc110074.790Xiphophorus_maculatus

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