EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023325 (Gene tree)
Gene ID: 110287836
Gene Symbol: Surf6
Alias: D2Wsu129e|Surf-6
Full Name: surfeit 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 14382 bases
Position: chr2:22754361-22768742
Accession: 110287836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0050427	SURF6	PF04935.12	2.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0050429	-	748	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050428	-	891	-	MGP_CAROLIEiJ_P0050428	208 (aa)	-	-
MGP_CAROLIEiJ_T0050430	-	372	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050425	-	631	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050427	-	3026	-	MGP_CAROLIEiJ_P0050427	355 (aa)	XP_021010015	UPI000A3169FB
MGP_CAROLIEiJ_T0050426	-	692	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023325	Surf6	99	72.778	ENSG00000148296	SURF6	99	72.778	Homo_sapiens
MGP_CAROLIEiJ_G0023325	Surf6	99	44.959	ENSAPOG00000021015	surf6	99	41.989	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023325	Surf6	99	66.667	ENSAMEG00000011733	SURF6	100	66.667	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023325	Surf6	99	43.360	ENSAOCG00000015839	surf6	99	40.110	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023325	Surf6	99	43.089	ENSAPEG00000022442	surf6	99	39.835	Amphiprion_percula
MGP_CAROLIEiJ_G0023325	Surf6	99	43.562	ENSATEG00000012640	surf6	99	43.836	Anabas_testudineus
MGP_CAROLIEiJ_G0023325	Surf6	88	52.681	ENSAPLG00000005069	SURF6	87	56.357	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023325	Surf6	100	69.748	ENSANAG00000021046	SURF6	100	70.868	Aotus_nancymaae
MGP_CAROLIEiJ_G0023325	Surf6	99	48.219	ENSACLG00000027819	surf6	99	42.857	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023325	Surf6	99	44.297	ENSAMXG00000012546	surf6	99	43.280	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023325	Surf6	100	67.967	ENSBTAG00000011554	SURF6	100	67.967	Bos_taurus
MGP_CAROLIEiJ_G0023325	Surf6	100	68.421	ENSCJAG00000017951	SURF6	100	68.698	Callithrix_jacchus
MGP_CAROLIEiJ_G0023325	Surf6	100	69.296	ENSCAFG00000019758	-	100	69.359	Canis_familiaris
MGP_CAROLIEiJ_G0023325	Surf6	100	63.099	ENSCAFG00000005159	-	100	63.380	Canis_familiaris
MGP_CAROLIEiJ_G0023325	Surf6	100	69.296	ENSCAFG00020001156	SURF6	100	69.359	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023325	Surf6	100	66.854	ENSCHIG00000025220	SURF6	100	66.854	Capra_hircus
MGP_CAROLIEiJ_G0023325	Surf6	100	71.348	ENSTSYG00000008431	SURF6	100	71.348	Carlito_syrichta
MGP_CAROLIEiJ_G0023325	Surf6	91	73.538	ENSCAPG00000010696	SURF6	100	73.538	Cavia_aperea
MGP_CAROLIEiJ_G0023325	Surf6	100	73.184	ENSCPOG00000030454	SURF6	100	73.743	Cavia_porcellus
MGP_CAROLIEiJ_G0023325	Surf6	64	77.826	ENSCCAG00000025688	SURF6	100	77.826	Cebus_capucinus
MGP_CAROLIEiJ_G0023325	Surf6	99	72.778	ENSCATG00000042004	SURF6	99	72.778	Cercocebus_atys
MGP_CAROLIEiJ_G0023325	Surf6	99	73.950	ENSCLAG00000004429	SURF6	89	74.510	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023325	Surf6	99	72.500	ENSCSAG00000018888	-	99	72.778	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023325	Surf6	99	68.595	ENSCSAG00000015203	-	99	68.306	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023325	Surf6	99	53.846	ENSCPBG00000021169	SURF6	99	54.795	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023325	Surf6	54	86.875	ENSCANG00000035022	SURF6	99	86.875	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023325	Surf6	100	83.662	ENSCGRG00000017035	Surf6	100	83.662	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023325	Surf6	99	44.693	ENSCSEG00000015172	surf6	99	42.179	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023325	Surf6	75	50.923	ENSCVAG00000015730	surf6	82	51.119	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023325	Surf6	99	40.761	ENSDARG00000035427	surf6	100	40.761	Danio_rerio
MGP_CAROLIEiJ_G0023325	Surf6	100	69.663	ENSDNOG00000049519	SURF6	97	69.663	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023325	Surf6	100	74.930	ENSDORG00000010761	Surf6	100	74.930	Dipodomys_ordii
MGP_CAROLIEiJ_G0023325	Surf6	91	63.190	ENSETEG00000004239	SURF6	99	65.644	Echinops_telfairi
MGP_CAROLIEiJ_G0023325	Surf6	100	67.416	ENSEASG00005009885	SURF6	100	67.416	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023325	Surf6	100	67.978	ENSECAG00000021229	SURF6	100	67.978	Equus_caballus
MGP_CAROLIEiJ_G0023325	Surf6	63	73.778	ENSEEUG00000001732	-	100	73.778	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023325	Surf6	81	68.858	ENSEEUG00000011071	-	100	68.858	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023325	Surf6	100	68.169	ENSFCAG00000040914	SURF6	100	68.169	Felis_catus
MGP_CAROLIEiJ_G0023325	Surf6	99	50.693	ENSFALG00000001495	SURF6	99	49.454	Ficedula_albicollis
MGP_CAROLIEiJ_G0023325	Surf6	90	72.840	ENSFDAG00000007052	SURF6	99	72.840	Fukomys_damarensis
MGP_CAROLIEiJ_G0023325	Surf6	99	45.504	ENSFHEG00000002290	surf6	99	42.077	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023325	Surf6	99	51.801	ENSGALG00000038413	SURF6	100	51.801	Gallus_gallus
MGP_CAROLIEiJ_G0023325	Surf6	99	46.612	ENSGAFG00000013618	surf6	99	47.922	Gambusia_affinis
MGP_CAROLIEiJ_G0023325	Surf6	99	51.194	ENSGAGG00000010286	SURF6	99	51.459	Gopherus_agassizii
MGP_CAROLIEiJ_G0023325	Surf6	99	73.056	ENSGGOG00000014426	SURF6	99	73.056	Gorilla_gorilla
MGP_CAROLIEiJ_G0023325	Surf6	99	48.219	ENSHBUG00000008764	surf6	99	42.857	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023325	Surf6	100	74.022	ENSHGLG00000013027	SURF6	100	74.022	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023325	Surf6	91	74.462	ENSHGLG00100015654	SURF6	82	74.462	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023325	Surf6	99	40.496	ENSHCOG00000001639	surf6	99	40.608	Hippocampus_comes
MGP_CAROLIEiJ_G0023325	Surf6	99	37.705	ENSIPUG00000008066	surf6	73	44.528	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023325	Surf6	100	68.333	ENSSTOG00000020164	SURF6	100	70.278	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023325	Surf6	100	73.596	ENSJJAG00000016287	Surf6	100	75.281	Jaculus_jaculus
MGP_CAROLIEiJ_G0023325	Surf6	99	46.369	ENSKMAG00000009936	surf6	100	43.370	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023325	Surf6	97	43.258	ENSLBEG00000024311	surf6	99	41.127	Labrus_bergylta
MGP_CAROLIEiJ_G0023325	Surf6	98	44.160	ENSLACG00000013322	SURF6	99	43.785	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023325	Surf6	100	45.722	ENSLOCG00000004072	surf6	100	45.989	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023325	Surf6	100	68.889	ENSLAFG00000026419	SURF6	100	69.188	Loxodonta_africana
MGP_CAROLIEiJ_G0023325	Surf6	92	72.072	ENSMMUG00000022339	-	99	72.372	Macaca_mulatta
MGP_CAROLIEiJ_G0023325	Surf6	99	72.222	ENSMNEG00000033787	SURF6	99	72.500	Macaca_nemestrina
MGP_CAROLIEiJ_G0023325	Surf6	99	72.500	ENSMLEG00000028750	SURF6	99	72.500	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023325	Surf6	99	40.503	ENSMAMG00000018269	surf6	99	42.105	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023325	Surf6	99	48.219	ENSMZEG00005003188	surf6	99	42.857	Maylandia_zebra
MGP_CAROLIEiJ_G0023325	Surf6	99	50.416	ENSMGAG00000006371	SURF6	100	50.416	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023325	Surf6	100	85.634	ENSMAUG00000020676	Surf6	100	85.634	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023325	Surf6	100	73.315	ENSMICG00000046077	SURF6	100	73.315	Microcebus_murinus
MGP_CAROLIEiJ_G0023325	Surf6	100	85.070	ENSMOCG00000011956	Surf6	100	85.070	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023325	Surf6	99	60.894	ENSMODG00000012744	SURF6	99	61.173	Monodelphis_domestica
MGP_CAROLIEiJ_G0023325	Surf6	99	40.659	ENSMALG00000012310	surf6	99	40.659	Monopterus_albus
MGP_CAROLIEiJ_G0023325	Surf6	100	97.183	ENSMUSG00000036160	Surf6	100	97.183	Mus_musculus
MGP_CAROLIEiJ_G0023325	Surf6	100	94.648	MGP_PahariEiJ_G0024782	Surf6	100	94.648	Mus_pahari
MGP_CAROLIEiJ_G0023325	Surf6	100	98.028	MGP_SPRETEiJ_G0024242	Surf6	100	98.028	Mus_spretus
MGP_CAROLIEiJ_G0023325	Surf6	99	65.027	ENSMPUG00000012416	SURF6	94	65.027	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023325	Surf6	100	75.775	ENSNGAG00000015358	Surf6	100	76.056	Nannospalax_galili
MGP_CAROLIEiJ_G0023325	Surf6	99	42.818	ENSNBRG00000007805	surf6	99	43.132	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023325	Surf6	99	69.167	ENSNLEG00000013079	SURF6	99	69.167	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023325	Surf6	70	55.294	ENSMEUG00000006545	-	69	56.078	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023325	Surf6	50	80.337	ENSOPRG00000000430	-	100	73.568	Ochotona_princeps
MGP_CAROLIEiJ_G0023325	Surf6	100	71.944	ENSODEG00000015789	SURF6	100	71.944	Octodon_degus
MGP_CAROLIEiJ_G0023325	Surf6	98	47.778	ENSONIG00000011294	surf6	98	42.618	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023325	Surf6	99	45.556	ENSOANG00000011709	-	99	45.225	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023325	Surf6	99	38.275	ENSORLG00000003980	surf6	86	41.667	Oryzias_latipes
MGP_CAROLIEiJ_G0023325	Surf6	99	38.005	ENSORLG00020009339	surf6	86	41.389	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023325	Surf6	99	40.659	ENSORLG00015016272	surf6	86	41.713	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023325	Surf6	98	38.187	ENSOMEG00000011772	surf6	86	38.611	Oryzias_melastigma
MGP_CAROLIEiJ_G0023325	Surf6	100	71.067	ENSOGAG00000027199	SURF6	100	71.910	Otolemur_garnettii
MGP_CAROLIEiJ_G0023325	Surf6	74	58.491	ENSOARG00000003711	SURF6	99	53.704	Ovis_aries
MGP_CAROLIEiJ_G0023325	Surf6	99	73.056	ENSPPAG00000032305	SURF6	99	73.056	Pan_paniscus
MGP_CAROLIEiJ_G0023325	Surf6	100	68.169	ENSPPRG00000003090	SURF6	100	68.169	Panthera_pardus
MGP_CAROLIEiJ_G0023325	Surf6	99	73.056	ENSPTRG00000021514	SURF6	99	73.056	Pan_troglodytes
MGP_CAROLIEiJ_G0023325	Surf6	99	71.944	ENSPANG00000026036	SURF6	99	71.944	Papio_anubis
MGP_CAROLIEiJ_G0023325	Surf6	99	42.318	ENSPKIG00000025080	surf6	90	42.935	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023325	Surf6	99	52.617	ENSPSIG00000011771	SURF6	99	52.793	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023325	Surf6	75	45.221	ENSPMGG00000004798	surf6	93	45.221	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023325	Surf6	100	84.789	ENSPEMG00000012589	Surf6	100	84.789	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023325	Surf6	99	56.593	ENSPCIG00000017358	SURF6	99	60.446	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023325	Surf6	99	48.333	ENSPLAG00000021874	surf6	99	44.258	Poecilia_latipinna
MGP_CAROLIEiJ_G0023325	Surf6	83	51.316	ENSPMEG00000009994	surf6	86	45.485	Poecilia_mexicana
MGP_CAROLIEiJ_G0023325	Surf6	99	48.333	ENSPMEG00000009276	surf6	99	44.258	Poecilia_mexicana
MGP_CAROLIEiJ_G0023325	Surf6	83	50.165	ENSPREG00000021969	surf6	92	44.518	Poecilia_reticulata
MGP_CAROLIEiJ_G0023325	Surf6	99	72.500	ENSPPYG00000019728	SURF6	99	73.611	Pongo_abelii
MGP_CAROLIEiJ_G0023325	Surf6	85	61.056	ENSPCAG00000002906	SURF6	99	60.984	Procavia_capensis
MGP_CAROLIEiJ_G0023325	Surf6	100	72.145	ENSPCOG00000015707	SURF6	100	72.145	Propithecus_coquereli
MGP_CAROLIEiJ_G0023325	Surf6	100	63.687	ENSPVAG00000017042	SURF6	100	63.687	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023325	Surf6	99	48.219	ENSPNYG00000003445	surf6	99	42.857	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023325	Surf6	69	49.020	ENSPNAG00000006939	surf6	69	49.020	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023325	Surf6	100	88.451	ENSRNOG00000005031	Surf6	100	88.451	Rattus_norvegicus
MGP_CAROLIEiJ_G0023325	Surf6	99	72.778	ENSRBIG00000028268	SURF6	99	73.056	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023325	Surf6	99	72.778	ENSRROG00000012667	SURF6	99	73.056	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023325	Surf6	100	62.291	ENSSBOG00000024264	-	100	63.966	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023325	Surf6	100	58.449	ENSSHAG00000003742	SURF6	100	58.953	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023325	Surf6	99	44.562	ENSSFOG00015016640	surf6	97	44.619	Scleropages_formosus
MGP_CAROLIEiJ_G0023325	Surf6	99	47.238	ENSSMAG00000009846	surf6	99	44.475	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023325	Surf6	98	44.715	ENSSDUG00000007947	surf6	99	41.803	Seriola_dumerili
MGP_CAROLIEiJ_G0023325	Surf6	99	43.935	ENSSLDG00000015027	surf6	99	41.033	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023325	Surf6	99	49.319	ENSSPUG00000015954	SURF6	99	49.733	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023325	Surf6	99	44.324	ENSSPAG00000005916	surf6	99	41.713	Stegastes_partitus
MGP_CAROLIEiJ_G0023325	Surf6	100	65.084	ENSSSCG00000032106	SURF6	100	65.449	Sus_scrofa
MGP_CAROLIEiJ_G0023325	Surf6	99	50.689	ENSTGUG00000005438	-	100	49.454	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023325	Surf6	70	61.134	ENSTGUG00000005445	-	99	61.134	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023325	Surf6	99	46.575	ENSTRUG00000023872	surf6	99	41.111	Takifugu_rubripes
MGP_CAROLIEiJ_G0023325	Surf6	99	45.706	ENSTNIG00000007503	surf6	99	42.936	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023325	Surf6	100	67.760	ENSUAMG00000014627	SURF6	100	68.033	Ursus_americanus
MGP_CAROLIEiJ_G0023325	Surf6	100	69.577	ENSVVUG00000027289	SURF6	100	69.859	Vulpes_vulpes
MGP_CAROLIEiJ_G0023325	Surf6	99	44.847	ENSXETG00000005018	surf6	99	44.011	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023325	Surf6	99	48.189	ENSXCOG00000001322	surf6	99	43.175	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023325	Surf6	99	48.056	ENSXMAG00000024608	surf6	99	43.056	Xiphophorus_maculatus