EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023332 (Gene tree)
Gene ID: 110284941
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 10329 bases
Position: chr2:22820544-22830872
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0050463	RNase_T	PF00929.24	8.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0050465	-	737	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050464	-	607	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050467	-	379	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050466	-	574	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0050463	-	1066	-	MGP_CAROLIEiJ_P0050463	345 (aa)	-	-
MGP_CAROLIEiJ_T0050462	-	2165	-	MGP_CAROLIEiJ_P0050462	409 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023332	-	98	70.488	ENSG00000148300	REXO4	94	71.820	Homo_sapiens
MGP_CAROLIEiJ_G0023332	-	83	51.989	ENSAPOG00000019264	rexo4	81	51.989	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023332	-	91	67.632	ENSAMEG00000011649	REXO4	89	68.464	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023332	-	83	52.691	ENSAOCG00000004087	rexo4	81	52.691	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023332	-	83	52.408	ENSAPEG00000009106	rexo4	81	52.408	Amphiprion_percula
MGP_CAROLIEiJ_G0023332	-	84	50.571	ENSATEG00000017662	rexo4	81	50.571	Anabas_testudineus
MGP_CAROLIEiJ_G0023332	-	80	54.896	ENSAPLG00000005865	REXO4	98	54.896	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023332	-	98	67.726	ENSANAG00000028404	REXO4	96	69.024	Aotus_nancymaae
MGP_CAROLIEiJ_G0023332	-	85	52.486	ENSACLG00000006007	rexo4	83	52.486	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023332	-	83	51.676	ENSAMXG00000013291	rexo4	80	50.970	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023332	-	89	65.684	ENSBTAG00000019721	REXO4	88	65.323	Bos_taurus
MGP_CAROLIEiJ_G0023332	-	98	67.805	ENSCJAG00000009774	REXO4	96	68.537	Callithrix_jacchus
MGP_CAROLIEiJ_G0023332	-	94	68.608	ENSCAFG00000019767	REXO4	91	70.213	Canis_familiaris
MGP_CAROLIEiJ_G0023332	-	96	68.983	ENSCAFG00020000983	-	88	71.011	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023332	-	91	65.000	ENSCHIG00000009517	REXO4	88	66.129	Capra_hircus
MGP_CAROLIEiJ_G0023332	-	89	72.603	ENSTSYG00000027492	REXO4	87	72.603	Carlito_syrichta
MGP_CAROLIEiJ_G0023332	-	82	71.131	ENSCAPG00000014583	REXO4	98	70.238	Cavia_aperea
MGP_CAROLIEiJ_G0023332	-	97	67.229	ENSCPOG00000001386	REXO4	88	67.436	Cavia_porcellus
MGP_CAROLIEiJ_G0023332	-	99	68.286	ENSCCAG00000027049	REXO4	97	63.285	Cebus_capucinus
MGP_CAROLIEiJ_G0023332	-	98	69.512	ENSCATG00000028646	REXO4	88	71.693	Cercocebus_atys
MGP_CAROLIEiJ_G0023332	-	79	72.615	ENSCLAG00000006919	REXO4	98	72.000	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023332	-	96	71.072	ENSCSAG00000015280	REXO4	94	71.072	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023332	-	95	52.927	ENSCPBG00000021152	REXO4	84	56.787	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023332	-	51	57.143	ENSCING00000010751	-	95	49.612	Ciona_intestinalis
MGP_CAROLIEiJ_G0023332	-	98	69.268	ENSCANG00000029855	REXO4	96	69.268	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023332	-	99	84.069	ENSCGRG00001013126	Rexo4	96	84.069	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023332	-	99	84.069	ENSCGRG00000009819	Rexo4	99	84.069	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023332	-	83	50.435	ENSCSEG00000019343	rexo4	80	50.435	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023332	-	51	64.953	ENSCVAG00000014963	rexo4	58	64.953	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023332	-	54	63.877	ENSDARG00000088619	rexo4	83	64.444	Danio_rerio
MGP_CAROLIEiJ_G0023332	-	99	88.889	ENSDNOG00000002429	REXO4	65	88.889	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023332	-	82	73.294	ENSDORG00000006190	Rexo4	99	73.294	Dipodomys_ordii
MGP_CAROLIEiJ_G0023332	-	69	68.201	ENSEASG00005009915	-	79	68.182	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023332	-	93	70.079	ENSECAG00000007896	REXO4	83	70.588	Equus_caballus
MGP_CAROLIEiJ_G0023332	-	63	84.393	ENSEEUG00000012135	-	98	58.360	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023332	-	89	48.492	ENSELUG00000003539	rexo4	87	48.855	Esox_lucius
MGP_CAROLIEiJ_G0023332	-	90	68.649	ENSFCAG00000011652	REXO4	84	69.863	Felis_catus
MGP_CAROLIEiJ_G0023332	-	86	54.617	ENSFALG00000001520	REXO4	89	54.617	Ficedula_albicollis
MGP_CAROLIEiJ_G0023332	-	98	72.457	ENSFDAG00000016050	REXO4	96	73.067	Fukomys_damarensis
MGP_CAROLIEiJ_G0023332	-	90	50.402	ENSFHEG00000002413	rexo4	83	51.873	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023332	-	51	59.155	ENSGMOG00000012876	rexo4	64	59.155	Gadus_morhua
MGP_CAROLIEiJ_G0023332	-	79	47.842	ENSGAFG00000015404	-	83	48.029	Gambusia_affinis
MGP_CAROLIEiJ_G0023332	-	83	53.488	ENSGACG00000008065	rexo4	79	53.488	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023332	-	83	57.020	ENSGAGG00000010260	REXO4	84	57.020	Gopherus_agassizii
MGP_CAROLIEiJ_G0023332	-	98	70.244	ENSGGOG00000014508	REXO4	96	70.244	Gorilla_gorilla
MGP_CAROLIEiJ_G0023332	-	85	51.934	ENSHBUG00000000542	rexo4	83	51.934	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023332	-	99	69.976	ENSHGLG00000016901	REXO4	99	70.218	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023332	-	99	69.976	ENSHGLG00100017444	REXO4	99	70.218	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023332	-	51	62.085	ENSHCOG00000018196	rexo4	57	61.086	Hippocampus_comes
MGP_CAROLIEiJ_G0023332	-	83	48.286	ENSIPUG00000021084	rexo4	80	48.000	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023332	-	98	72.139	ENSSTOG00000003754	REXO4	90	72.751	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023332	-	100	74.092	ENSJJAG00000013002	Rexo4	87	76.596	Jaculus_jaculus
MGP_CAROLIEiJ_G0023332	-	83	50.146	ENSKMAG00000015039	rexo4	81	50.146	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023332	-	83	50.857	ENSLBEG00000025570	rexo4	80	50.857	Labrus_bergylta
MGP_CAROLIEiJ_G0023332	-	87	51.213	ENSLACG00000012399	REXO4	85	51.213	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023332	-	52	70.370	ENSLOCG00000003577	rexo4	79	51.445	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023332	-	99	61.631	ENSLAFG00000011274	REXO4	92	64.398	Loxodonta_africana
MGP_CAROLIEiJ_G0023332	-	98	69.512	ENSMFAG00000042425	REXO4	96	69.512	Macaca_fascicularis
MGP_CAROLIEiJ_G0023332	-	98	69.268	ENSMMUG00000000935	REXO4	94	70.574	Macaca_mulatta
MGP_CAROLIEiJ_G0023332	-	98	69.024	ENSMNEG00000031604	REXO4	96	69.024	Macaca_nemestrina
MGP_CAROLIEiJ_G0023332	-	98	69.756	ENSMLEG00000037716	REXO4	96	69.756	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023332	-	84	51.124	ENSMAMG00000011251	rexo4	86	49.596	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023332	-	85	51.934	ENSMZEG00005012336	rexo4	83	51.934	Maylandia_zebra
MGP_CAROLIEiJ_G0023332	-	83	58.120	ENSMGAG00000006521	REXO4	97	58.120	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023332	-	99	85.294	ENSMAUG00000015137	Rexo4	96	85.294	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023332	-	96	68.000	ENSMICG00000008422	REXO4	88	69.624	Microcebus_murinus
MGP_CAROLIEiJ_G0023332	-	99	85.468	ENSMOCG00000020607	Rexo4	94	85.468	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023332	-	86	59.066	ENSMODG00000012817	REXO4	84	59.066	Monodelphis_domestica
MGP_CAROLIEiJ_G0023332	-	87	52.089	ENSMALG00000019705	rexo4	83	52.089	Monopterus_albus
MGP_CAROLIEiJ_G0023332	-	100	97.971	ENSMUSG00000052406	Rexo4	100	96.822	Mus_musculus
MGP_CAROLIEiJ_G0023332	-	100	92.665	MGP_PahariEiJ_G0024789	Rexo4	100	92.665	Mus_pahari
MGP_CAROLIEiJ_G0023332	-	100	98.261	MGP_SPRETEiJ_G0024249	-	100	98.261	Mus_spretus
MGP_CAROLIEiJ_G0023332	-	82	67.941	ENSMPUG00000012315	REXO4	96	67.941	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023332	-	98	74.065	ENSNGAG00000010700	Rexo4	98	74.065	Nannospalax_galili
MGP_CAROLIEiJ_G0023332	-	85	51.657	ENSNBRG00000011712	rexo4	83	51.657	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023332	-	96	69.900	ENSNLEG00000013130	-	94	69.900	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023332	-	96	64.824	ENSNLEG00000007556	-	85	69.653	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023332	-	78	84.000	ENSMEUG00000006513	-	66	84.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023332	-	83	65.689	ENSODEG00000015721	REXO4	99	65.689	Octodon_degus
MGP_CAROLIEiJ_G0023332	-	87	52.846	ENSONIG00000020052	rexo4	85	52.846	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023332	-	85	55.556	ENSOANG00000002453	REXO4	93	55.556	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023332	-	85	53.955	ENSORLG00000006904	rexo4	82	53.955	Oryzias_latipes
MGP_CAROLIEiJ_G0023332	-	85	51.781	ENSORLG00020013768	rexo4	82	51.781	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023332	-	85	50.689	ENSORLG00015012070	rexo4	82	50.689	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023332	-	85	52.542	ENSOMEG00000018327	rexo4	81	52.542	Oryzias_melastigma
MGP_CAROLIEiJ_G0023332	-	97	67.500	ENSOGAG00000014040	REXO4	85	72.394	Otolemur_garnettii
MGP_CAROLIEiJ_G0023332	-	98	70.488	ENSPPAG00000027911	REXO4	94	71.820	Pan_paniscus
MGP_CAROLIEiJ_G0023332	-	96	67.506	ENSPPRG00000002894	REXO4	89	69.293	Panthera_pardus
MGP_CAROLIEiJ_G0023332	-	93	59.432	ENSPTIG00000012007	REXO4	87	60.811	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023332	-	98	70.488	ENSPTRG00000023363	REXO4	94	71.820	Pan_troglodytes
MGP_CAROLIEiJ_G0023332	-	98	69.756	ENSPANG00000026040	REXO4	96	69.756	Papio_anubis
MGP_CAROLIEiJ_G0023332	-	83	52.422	ENSPKIG00000024761	rexo4	81	52.422	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023332	-	83	58.659	ENSPSIG00000016908	REXO4	84	58.659	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023332	-	85	48.670	ENSPMGG00000005312	rexo4	82	48.936	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023332	-	99	86.667	ENSPEMG00000017982	Rexo4	99	86.667	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023332	-	95	56.543	ENSPCIG00000017379	REXO4	85	58.266	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023332	-	85	50.716	ENSPFOG00000017751	rexo4	83	50.857	Poecilia_formosa
MGP_CAROLIEiJ_G0023332	-	85	51.003	ENSPLAG00000010487	rexo4	83	50.857	Poecilia_latipinna
MGP_CAROLIEiJ_G0023332	-	85	51.149	ENSPMEG00000020767	rexo4	83	51.003	Poecilia_mexicana
MGP_CAROLIEiJ_G0023332	-	85	50.430	ENSPREG00000021841	rexo4	83	50.286	Poecilia_reticulata
MGP_CAROLIEiJ_G0023332	-	97	70.617	ENSPPYG00000019735	REXO4	95	70.617	Pongo_abelii
MGP_CAROLIEiJ_G0023332	-	86	64.225	ENSPCAG00000010581	REXO4	85	64.507	Procavia_capensis
MGP_CAROLIEiJ_G0023332	-	91	70.133	ENSPCOG00000025466	REXO4	88	70.350	Propithecus_coquereli
MGP_CAROLIEiJ_G0023332	-	95	60.305	ENSPVAG00000001429	REXO4	86	62.050	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023332	-	85	51.934	ENSPNYG00000013712	rexo4	83	51.934	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023332	-	84	48.603	ENSPNAG00000019227	rexo4	80	48.603	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023332	-	99	86.453	ENSRNOG00000027867	Rexo4	99	86.453	Rattus_norvegicus
MGP_CAROLIEiJ_G0023332	-	99	68.841	ENSRBIG00000037515	REXO4	97	67.703	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023332	-	99	68.599	ENSRROG00000028864	REXO4	97	67.464	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023332	-	91	65.846	ENSSBOG00000032587	REXO4	97	57.246	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023332	-	85	59.331	ENSSHAG00000005827	REXO4	92	58.289	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023332	-	51	72.897	ENSSFOG00015017394	rexo4	84	57.003	Scleropages_formosus
MGP_CAROLIEiJ_G0023332	-	85	50.838	ENSSMAG00000015441	rexo4	82	50.838	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023332	-	84	51.240	ENSSDUG00000023346	rexo4	80	50.000	Seriola_dumerili
MGP_CAROLIEiJ_G0023332	-	84	51.977	ENSSLDG00000011085	rexo4	81	51.977	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023332	-	86	52.304	ENSSPUG00000015868	REXO4	85	52.304	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023332	-	83	51.156	ENSSPAG00000007221	rexo4	81	51.156	Stegastes_partitus
MGP_CAROLIEiJ_G0023332	-	97	63.614	ENSSSCG00000023173	REXO4	88	64.362	Sus_scrofa
MGP_CAROLIEiJ_G0023332	-	88	53.887	ENSTGUG00000005537	REXO4	93	53.581	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023332	-	83	51.966	ENSTRUG00000013225	rexo4	84	51.966	Takifugu_rubripes
MGP_CAROLIEiJ_G0023332	-	88	51.099	ENSTNIG00000005873	rexo4	100	51.099	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023332	-	66	83.626	ENSTTRG00000007681	-	98	59.118	Tursiops_truncatus
MGP_CAROLIEiJ_G0023332	-	90	69.251	ENSUAMG00000018676	REXO4	86	70.137	Ursus_americanus
MGP_CAROLIEiJ_G0023332	-	84	64.286	ENSUMAG00000023164	REXO4	95	64.286	Ursus_maritimus
MGP_CAROLIEiJ_G0023332	-	96	68.317	ENSVVUG00000027337	REXO4	88	70.745	Vulpes_vulpes
MGP_CAROLIEiJ_G0023332	-	79	48.387	ENSXETG00000023096	rexo4	83	51.656	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023332	-	85	49.714	ENSXMAG00000013686	rexo4	86	49.573	Xiphophorus_maculatus