EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0023368 (Gene tree)
Gene ID
110287601
Gene Symbol
Trub2
Alias
G430055L02Rik
Full Name
TruB pseudouridine synthase family member 2
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
28652 bases
Position
chr2:25620808-25649459
Accession
110287601
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0050653TruB_NPF01509.181.2e-2511
MGP_CAROLIEiJ_P0050650TruB_NPF01509.185.6e-1311
MGP_CAROLIEiJ_P0050655TruB_NPF01509.186.8e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0050658-760--- (aa)--
MGP_CAROLIEiJ_T0050659-491--- (aa)--
MGP_CAROLIEiJ_T0050656-806-MGP_CAROLIEiJ_P0050656121 (aa)--
MGP_CAROLIEiJ_T0050657-416--- (aa)--
MGP_CAROLIEiJ_T0050654-763-MGP_CAROLIEiJ_P0050654121 (aa)--
MGP_CAROLIEiJ_T0050655-744-MGP_CAROLIEiJ_P0050655194 (aa)--
MGP_CAROLIEiJ_T0050652-3393-MGP_CAROLIEiJ_P0050652121 (aa)--
MGP_CAROLIEiJ_T0050653-3011-MGP_CAROLIEiJ_P0050653331 (aa)XP_021009837UPI000A3145FA
MGP_CAROLIEiJ_T0050650-1040-MGP_CAROLIEiJ_P0050650204 (aa)--
MGP_CAROLIEiJ_T0050660-370--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0023368's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023368's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0023368Trub28731.073MGP_CAROLIEiJ_G0023100Trub15730.055
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0023368Trub210082.175ENSG00000167112TRUB210082.175Homo_sapiens
MGP_CAROLIEiJ_G0023368Trub28442.446ENSAPOG00000018284-7656.934Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023368Trub26256.585ENSAPOG00000015733trub27456.585Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023368Trub29980.303ENSAMEG00000015395TRUB29980.303Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023368Trub28947.701ENSACIG00000016500trub28551.429Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023368Trub28850.581ENSAOCG00000002330trub28254.286Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023368Trub28851.163ENSAPEG00000013177trub28254.643Amphiprion_percula
MGP_CAROLIEiJ_G0023368Trub29749.474ENSATEG00000011371trub29351.689Anabas_testudineus
MGP_CAROLIEiJ_G0023368Trub28957.667ENSAPLG00000009254TRUB29558.333Anas_platyrhynchos
MGP_CAROLIEiJ_G0023368Trub29263.158ENSACAG00000007331TRUB29163.158Anolis_carolinensis
MGP_CAROLIEiJ_G0023368Trub29483.923ENSANAG00000036234TRUB210083.923Aotus_nancymaae
MGP_CAROLIEiJ_G0023368Trub29546.524ENSACLG00000010793trub28451.799Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023368Trub29651.064ENSAMXG00000031679trub28853.571Astyanax_mexicanus
MGP_CAROLIEiJ_G0023368Trub25381.356ENSBTAG00000055269-8081.356Bos_taurus
MGP_CAROLIEiJ_G0023368Trub28580.488ENSBTAG00000004663TRUB210080.488Bos_taurus
MGP_CAROLIEiJ_G0023368Trub210081.873ENSCJAG00000020009TRUB210081.873Callithrix_jacchus
MGP_CAROLIEiJ_G0023368Trub210080.363ENSCAFG00000020068TRUB210080.363Canis_familiaris
MGP_CAROLIEiJ_G0023368Trub29282.022ENSCAFG00020017325-10082.584Canis_lupus_dingo
MGP_CAROLIEiJ_G0023368Trub210080.665ENSCHIG00000021160TRUB210080.665Capra_hircus
MGP_CAROLIEiJ_G0023368Trub29983.486ENSTSYG00000034163TRUB29983.486Carlito_syrichta
MGP_CAROLIEiJ_G0023368Trub28979.932ENSCAPG00000000223TRUB29979.932Cavia_aperea
MGP_CAROLIEiJ_G0023368Trub210080.060ENSCPOG00000013535TRUB29980.060Cavia_porcellus
MGP_CAROLIEiJ_G0023368Trub29779.688ENSCCAG00000028463-9878.086Cebus_capucinus
MGP_CAROLIEiJ_G0023368Trub29782.500ENSCCAG00000026531-9882.500Cebus_capucinus
MGP_CAROLIEiJ_G0023368Trub210081.269ENSCATG00000038234TRUB210081.269Cercocebus_atys
MGP_CAROLIEiJ_G0023368Trub210081.959ENSCLAG00000001702TRUB29981.424Chinchilla_lanigera
MGP_CAROLIEiJ_G0023368Trub210076.807ENSCSAG00000014117TRUB210076.807Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023368Trub210081.269ENSCHOG00000001555TRUB210081.269Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023368Trub29959.574ENSCPBG00000025186TRUB29559.574Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023368Trub28733.140ENSCSAVG00000003930-9032.765Ciona_savignyi
MGP_CAROLIEiJ_G0023368Trub210073.414ENSCANG00000016135TRUB210073.414Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023368Trub210089.426ENSCGRG00001024441Trub210089.426Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023368Trub210089.426ENSCGRG00000005633Trub210089.426Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023368Trub29547.059ENSCSEG00000001331trub28351.613Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023368Trub29546.196ENSCVAG00000009901trub28352.536Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023368Trub29651.064ENSDARG00000028379trub28053.571Danio_rerio
MGP_CAROLIEiJ_G0023368Trub29156.811ENSDNOG00000043967-9256.811Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023368Trub29978.963ENSDNOG00000045679-9978.963Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023368Trub210080.422ENSDORG00000016222Trub29882.428Dipodomys_ordii
MGP_CAROLIEiJ_G0023368Trub28332.975FBgn0033060CG78498732.975Drosophila_melanogaster
MGP_CAROLIEiJ_G0023368Trub29579.233ENSETEG00000009114TRUB29679.233Echinops_telfairi
MGP_CAROLIEiJ_G0023368Trub28736.264ENSEBUG00000015723trub28544.737Eptatretus_burgeri
MGP_CAROLIEiJ_G0023368Trub210081.269ENSEASG00005016819TRUB210081.269Equus_asinus_asinus
MGP_CAROLIEiJ_G0023368Trub210081.873ENSECAG00000023520TRUB210081.873Equus_caballus
MGP_CAROLIEiJ_G0023368Trub29483.871ENSEEUG00000008908TRUB29483.871Erinaceus_europaeus
MGP_CAROLIEiJ_G0023368Trub28950.000ENSELUG00000002376trub29153.265Esox_lucius
MGP_CAROLIEiJ_G0023368Trub210079.279ENSFCAG00000005839TRUB210079.279Felis_catus
MGP_CAROLIEiJ_G0023368Trub28061.742ENSFALG00000001364TRUB28562.500Ficedula_albicollis
MGP_CAROLIEiJ_G0023368Trub210081.443ENSFDAG00000021374TRUB29981.212Fukomys_damarensis
MGP_CAROLIEiJ_G0023368Trub28647.222ENSFHEG00000014655trub28547.222Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023368Trub29538.919ENSGMOG00000000981trub29245.652Gadus_morhua
MGP_CAROLIEiJ_G0023368Trub29060.067ENSGALG00000004920TRUB27360.067Gallus_gallus
MGP_CAROLIEiJ_G0023368Trub29647.059ENSGAFG00000010107trub28851.186Gambusia_affinis
MGP_CAROLIEiJ_G0023368Trub29648.677ENSGACG00000001476trub28453.381Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023368Trub28865.979ENSGAGG00000022872TRUB28665.979Gopherus_agassizii
MGP_CAROLIEiJ_G0023368Trub210082.175ENSGGOG00000014780TRUB210082.175Gorilla_gorilla
MGP_CAROLIEiJ_G0023368Trub29546.524ENSHBUG00000022384trub28452.518Haplochromis_burtoni
MGP_CAROLIEiJ_G0023368Trub29981.212ENSHGLG00000016715TRUB29981.212Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023368Trub29981.212ENSHGLG00100016548TRUB29981.212Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023368Trub29648.677ENSHCOG00000017748trub28653.214Hippocampus_comes
MGP_CAROLIEiJ_G0023368Trub29647.340ENSIPUG00000017725hdhd35152.542Ictalurus_punctatus
MGP_CAROLIEiJ_G0023368Trub29980.734ENSSTOG00000022617-9980.734Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023368Trub210080.363ENSSTOG00000008024-10080.363Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023368Trub29975.684ENSJJAG00000019181Trub29975.684Jaculus_jaculus
MGP_CAROLIEiJ_G0023368Trub28848.256ENSKMAG00000007861trub28351.971Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023368Trub29250.329ENSLBEG00000000907trub28750.329Labrus_bergylta
MGP_CAROLIEiJ_G0023368Trub28963.140ENSLACG00000001515TRUB28763.140Latimeria_chalumnae
MGP_CAROLIEiJ_G0023368Trub28755.814ENSLOCG00000000885trub29555.670Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023368Trub29283.828ENSLAFG00000002174TRUB210083.828Loxodonta_africana
MGP_CAROLIEiJ_G0023368Trub210080.665ENSMFAG00000000881TRUB210080.665Macaca_fascicularis
MGP_CAROLIEiJ_G0023368Trub210080.363ENSMMUG00000014146TRUB210080.363Macaca_mulatta
MGP_CAROLIEiJ_G0023368Trub210080.363ENSMNEG00000011189TRUB210080.363Macaca_nemestrina
MGP_CAROLIEiJ_G0023368Trub210080.967ENSMLEG00000037270TRUB210080.967Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023368Trub29548.387ENSMAMG00000023643trub29254.317Mastacembelus_armatus
MGP_CAROLIEiJ_G0023368Trub29546.524ENSMZEG00005016018trub28452.158Maylandia_zebra
MGP_CAROLIEiJ_G0023368Trub26066.500ENSMGAG00000003894TRUB210066.500Meleagris_gallopavo
MGP_CAROLIEiJ_G0023368Trub210092.268ENSMAUG00000010403Trub210090.937Mesocricetus_auratus
MGP_CAROLIEiJ_G0023368Trub210080.967ENSMICG00000047032TRUB210080.967Microcebus_murinus
MGP_CAROLIEiJ_G0023368Trub210087.745ENSMOCG00000014291Trub210091.148Microtus_ochrogaster
MGP_CAROLIEiJ_G0023368Trub29750.262ENSMMOG00000021674trub28654.093Mola_mola
MGP_CAROLIEiJ_G0023368Trub28873.288ENSMODG00000005940TRUB29973.288Monodelphis_domestica
MGP_CAROLIEiJ_G0023368Trub29251.792ENSMALG00000021231trub29051.792Monopterus_albus
MGP_CAROLIEiJ_G0023368Trub210097.583ENSMUSG00000039826Trub210097.583Mus_musculus
MGP_CAROLIEiJ_G0023368Trub210096.392MGP_PahariEiJ_G0024826Trub210096.392Mus_pahari
MGP_CAROLIEiJ_G0023368Trub210097.583MGP_SPRETEiJ_G0024286Trub210097.583Mus_spretus
MGP_CAROLIEiJ_G0023368Trub210077.946ENSMPUG00000013206TRUB29177.946Mustela_putorius_furo
MGP_CAROLIEiJ_G0023368Trub29980.606ENSMLUG00000005256TRUB29980.606Myotis_lucifugus
MGP_CAROLIEiJ_G0023368Trub210084.894ENSNGAG00000018679Trub210084.894Nannospalax_galili
MGP_CAROLIEiJ_G0023368Trub29547.594ENSNBRG00000016294trub28452.688Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023368Trub210080.665ENSNLEG00000017556TRUB210080.665Nomascus_leucogenys
MGP_CAROLIEiJ_G0023368Trub29174.172ENSMEUG00000000484TRUB29774.172Notamacropus_eugenii
MGP_CAROLIEiJ_G0023368Trub29977.879ENSOPRG00000001981TRUB210077.879Ochotona_princeps
MGP_CAROLIEiJ_G0023368Trub210080.928ENSODEG00000017292TRUB29980.368Octodon_degus
MGP_CAROLIEiJ_G0023368Trub29546.774ENSONIG00000004230trub28452.158Oreochromis_niloticus
MGP_CAROLIEiJ_G0023368Trub27376.056ENSOANG00000029023-8375.936Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023368Trub29980.243ENSOCUG00000026296TRUB29180.363Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023368Trub28848.538ENSORLG00000020011trub28451.786Oryzias_latipes
MGP_CAROLIEiJ_G0023368Trub28848.824ENSORLG00020011028trub28251.971Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023368Trub28848.824ENSORLG00015007494trub28651.971Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023368Trub29548.925ENSOMEG00000006702trub28453.597Oryzias_melastigma
MGP_CAROLIEiJ_G0023368Trub28080.128ENSOGAG00000003511-9580.128Otolemur_garnettii
MGP_CAROLIEiJ_G0023368Trub29980.606ENSOARG00000010579-9980.606Ovis_aries
MGP_CAROLIEiJ_G0023368Trub27680.159ENSOARG00000003785-10080.159Ovis_aries
MGP_CAROLIEiJ_G0023368Trub210082.175ENSPPAG00000043146TRUB210082.175Pan_paniscus
MGP_CAROLIEiJ_G0023368Trub210079.279ENSPPRG00000006307TRUB210079.279Panthera_pardus
MGP_CAROLIEiJ_G0023368Trub210078.979ENSPTIG00000012366TRUB210078.979Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023368Trub210081.873ENSPTRG00000021423TRUB210081.873Pan_troglodytes
MGP_CAROLIEiJ_G0023368Trub210081.873ENSPTRG00000052151-10081.873Pan_troglodytes
MGP_CAROLIEiJ_G0023368Trub210081.269ENSPANG00000025856TRUB210081.269Papio_anubis
MGP_CAROLIEiJ_G0023368Trub28753.529ENSPKIG00000019769trub29153.763Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023368Trub29159.603ENSPSIG00000015701TRUB29959.603Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023368Trub29947.692ENSPMGG00000010206trub29050.871Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023368Trub210089.157ENSPEMG00000017893Trub210089.157Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023368Trub29573.163ENSPCIG00000026731TRUB29973.163Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023368Trub28850.292ENSPFOG00000018018trub27551.761Poecilia_formosa
MGP_CAROLIEiJ_G0023368Trub28849.708ENSPLAG00000010484trub28151.408Poecilia_latipinna
MGP_CAROLIEiJ_G0023368Trub28849.711ENSPMEG00000012913trub28451.943Poecilia_mexicana
MGP_CAROLIEiJ_G0023368Trub28748.824ENSPREG00000002549trub28450.883Poecilia_reticulata
MGP_CAROLIEiJ_G0023368Trub29881.902ENSPPYG00000019650TRUB210081.902Pongo_abelii
MGP_CAROLIEiJ_G0023368Trub210080.363ENSPCAG00000015068TRUB210080.363Procavia_capensis
MGP_CAROLIEiJ_G0023368Trub210080.967ENSPCOG00000017100TRUB210080.967Propithecus_coquereli
MGP_CAROLIEiJ_G0023368Trub29083.165ENSPVAG00000001224TRUB29983.165Pteropus_vampyrus
MGP_CAROLIEiJ_G0023368Trub29546.524ENSPNYG00000013666trub28452.158Pundamilia_nyererei
MGP_CAROLIEiJ_G0023368Trub29849.846ENSPNAG00000017292trub29249.846Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023368Trub29591.772ENSRNOG00000043189Trub29891.772Rattus_norvegicus
MGP_CAROLIEiJ_G0023368Trub210074.320ENSRBIG00000006965TRUB210074.320Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023368Trub210082.175ENSRROG00000042928TRUB210082.175Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023368Trub29881.902ENSSBOG00000022439TRUB29881.902Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023368Trub28753.254ENSSFOG00015013391trub28955.755Scleropages_formosus
MGP_CAROLIEiJ_G0023368Trub29550.949ENSSMAG00000020820trub29550.949Scophthalmus_maximus
MGP_CAROLIEiJ_G0023368Trub29647.619ENSSDUG00000016928trub28452.500Seriola_dumerili
MGP_CAROLIEiJ_G0023368Trub29647.619ENSSLDG00000024701trub28452.500Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023368Trub29059.468ENSSPUG00000015515TRUB29059.468Sphenodon_punctatus
MGP_CAROLIEiJ_G0023368Trub29648.148ENSSPAG00000017865trub28555.124Stegastes_partitus
MGP_CAROLIEiJ_G0023368Trub210081.873ENSSSCG00000005645TRUB29981.695Sus_scrofa
MGP_CAROLIEiJ_G0023368Trub27963.740ENSTGUG00000003704TRUB210063.740Taeniopygia_guttata
MGP_CAROLIEiJ_G0023368Trub28450.000ENSTRUG00000015499trub28650.000Takifugu_rubripes
MGP_CAROLIEiJ_G0023368Trub29745.833ENSTNIG00000014721trub29651.957Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023368Trub26878.222ENSTBEG00000000586TRUB210078.222Tupaia_belangeri
MGP_CAROLIEiJ_G0023368Trub210076.435ENSTTRG00000016486TRUB210076.435Tursiops_truncatus
MGP_CAROLIEiJ_G0023368Trub29980.303ENSUAMG00000020276TRUB29680.303Ursus_americanus
MGP_CAROLIEiJ_G0023368Trub29980.303ENSUMAG00000022051TRUB29680.303Ursus_maritimus
MGP_CAROLIEiJ_G0023368Trub29171.186ENSVPAG00000005793TRUB29962.102Vicugna_pacos
MGP_CAROLIEiJ_G0023368Trub29282.895ENSVVUG00000013451TRUB28682.895Vulpes_vulpes
MGP_CAROLIEiJ_G0023368Trub28760.355ENSXETG00000003973trub28564.130Xenopus_tropicalis
MGP_CAROLIEiJ_G0023368Trub29647.594ENSXCOG00000008759trub28352.878Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023368Trub29647.059ENSXMAG00000015478trub28352.878Xiphophorus_maculatus

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