EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023450 (Gene tree)
Gene ID: 110287884
Gene Symbol: Ptrh1
Alias: 2210013M04Rik
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 1816 bases
Position: chr2:28652009-28653824
Accession: 110287884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0051214	Pept_tRNA_hydro	PF01195.19	2.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0051215	-	344	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0051214	-	953	XM_021154387	MGP_CAROLIEiJ_P0051214	204 (aa)	XP_021010046	UPI000A3178CD
MGP_CAROLIEiJ_T0051216	-	909	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.422	ENSG00000187024	PTRH1	93	84.422	Homo_sapiens
MGP_CAROLIEiJ_G0023450	Ptrh1	89	59.341	ENSAPOG00000000947	PTRH1	65	59.341	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	59.341	ENSAPOG00000003014	-	65	59.341	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	59.341	ENSAPOG00000010719	ptrh1	65	59.341	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	76.768	ENSAMEG00000016791	PTRH1	94	76.768	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023450	Ptrh1	84	60.234	ENSACIG00000006734	ptrh1	73	60.234	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	57.143	ENSAOCG00000009725	ptrh1	65	57.143	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023450	Ptrh1	89	57.143	ENSAPEG00000020993	ptrh1	65	57.143	Amphiprion_percula
MGP_CAROLIEiJ_G0023450	Ptrh1	89	57.692	ENSATEG00000010003	ptrh1	65	57.692	Anabas_testudineus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	80.905	ENSANAG00000025547	PTRH1	93	80.905	Aotus_nancymaae
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	ENSACLG00000025462	ptrh1	72	58.242	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023450	Ptrh1	86	57.143	ENSAMXG00000034117	ptrh1	66	57.143	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	71.910	ENSBTAG00000012736	PTRH1	60	71.910	Bos_taurus
MGP_CAROLIEiJ_G0023450	Ptrh1	95	83.420	ENSCJAG00000019841	PTRH1	91	69.822	Callithrix_jacchus
MGP_CAROLIEiJ_G0023450	Ptrh1	99	79.902	ENSCAFG00000020123	PTRH1	94	79.902	Canis_familiaris
MGP_CAROLIEiJ_G0023450	Ptrh1	99	80.296	ENSCAFG00020015776	PTRH1	91	80.296	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023450	Ptrh1	98	80.500	ENSCHIG00000008188	PTRH1	93	80.500	Capra_hircus
MGP_CAROLIEiJ_G0023450	Ptrh1	52	80.189	ENSTSYG00000026891	-	98	80.189	Carlito_syrichta
MGP_CAROLIEiJ_G0023450	Ptrh1	68	86.957	ENSCAPG00000015926	PTRH1	99	86.957	Cavia_aperea
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.000	ENSCPOG00000023968	PTRH1	93	84.000	Cavia_porcellus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	82.412	ENSCCAG00000023134	PTRH1	93	82.412	Cebus_capucinus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	85.279	ENSCATG00000042852	PTRH1	92	85.279	Cercocebus_atys
MGP_CAROLIEiJ_G0023450	Ptrh1	97	83.249	ENSCLAG00000011155	PTRH1	92	83.249	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023450	Ptrh1	97	85.279	ENSCSAG00000013748	PTRH1	86	85.279	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023450	Ptrh1	78	60.000	ENSCPBG00000025207	PTRH1	91	60.000	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023450	Ptrh1	97	84.080	ENSCANG00000039856	PTRH1	94	84.080	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	89.216	ENSCGRG00001013108	Ptrh1	100	89.216	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023450	Ptrh1	89	90.659	ENSCGRG00000016553	Ptrh1	100	90.659	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023450	Ptrh1	88	54.190	ENSCSEG00000010332	ptrh1	65	54.190	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023450	Ptrh1	86	55.429	ENSCVAG00000010701	ptrh1	67	55.495	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023450	Ptrh1	64	50.000	ENSCVAG00000003873	-	80	59.633	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023450	Ptrh1	88	55.249	ENSDARG00000098206	ptrh1	79	55.249	Danio_rerio
MGP_CAROLIEiJ_G0023450	Ptrh1	97	83.333	ENSDNOG00000024194	PTRH1	93	83.333	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	83.085	ENSDORG00000013321	Ptrh1	93	83.085	Dipodomys_ordii
MGP_CAROLIEiJ_G0023450	Ptrh1	98	85.500	ENSEASG00005020466	PTRH1	93	85.500	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	84.848	ENSECAG00000007615	PTRH1	73	84.848	Equus_caballus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	57.714	ENSELUG00000015467	ptrh1	65	57.714	Esox_lucius
MGP_CAROLIEiJ_G0023450	Ptrh1	97	77.778	ENSFCAG00000001483	PTRH1	93	77.778	Felis_catus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	55.729	ENSFALG00000001352	PTRH1	91	55.729	Ficedula_albicollis
MGP_CAROLIEiJ_G0023450	Ptrh1	99	80.788	ENSFDAG00000020077	PTRH1	99	80.788	Fukomys_damarensis
MGP_CAROLIEiJ_G0023450	Ptrh1	92	56.383	ENSFHEG00000010590	ptrh1	71	56.383	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023450	Ptrh1	57	55.556	ENSGMOG00000009801	PTRH1	84	55.556	Gadus_morhua
MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.242	ENSGAFG00000016215	ptrh1	72	59.649	Gambusia_affinis
MGP_CAROLIEiJ_G0023450	Ptrh1	87	57.303	ENSGACG00000014682	ptrh1	95	57.609	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023450	Ptrh1	96	59.694	ENSGAGG00000022860	PTRH1	88	59.694	Gopherus_agassizii
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.422	ENSGGOG00000011033	PTRH1	93	84.422	Gorilla_gorilla
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	ENSHBUG00000020824	ptrh1	65	58.242	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023450	Ptrh1	97	84.343	ENSHGLG00000019147	PTRH1	97	84.343	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023450	Ptrh1	97	80.711	ENSHGLG00100003681	PTRH1	99	80.711	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023450	Ptrh1	89	56.522	ENSHCOG00000014772	ptrh1	70	56.522	Hippocampus_comes
MGP_CAROLIEiJ_G0023450	Ptrh1	86	60.000	ENSIPUG00000015364	ptrh1	69	60.000	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023450	Ptrh1	96	86.224	ENSSTOG00000008942	PTRH1	92	86.224	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	85.500	ENSJJAG00000014338	Ptrh1	97	85.500	Jaculus_jaculus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	57.143	ENSKMAG00000003253	ptrh1	66	57.143	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023450	Ptrh1	62	59.524	ENSLBEG00000028842	ptrh1	75	59.524	Labrus_bergylta
MGP_CAROLIEiJ_G0023450	Ptrh1	95	57.216	ENSLACG00000016741	PTRH1	80	57.216	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023450	Ptrh1	98	79.104	ENSLAFG00000021934	PTRH1	99	79.104	Loxodonta_africana
MGP_CAROLIEiJ_G0023450	Ptrh1	97	85.279	ENSMFAG00000001700	PTRH1	92	85.279	Macaca_fascicularis
MGP_CAROLIEiJ_G0023450	Ptrh1	97	85.279	ENSMMUG00000016424	PTRH1	92	85.279	Macaca_mulatta
MGP_CAROLIEiJ_G0023450	Ptrh1	97	85.279	ENSMNEG00000033061	PTRH1	86	85.279	Macaca_nemestrina
MGP_CAROLIEiJ_G0023450	Ptrh1	51	86.538	ENSMLEG00000042412	-	96	86.538	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	56.571	ENSMAMG00000017386	ptrh1	71	55.729	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	ENSMZEG00005020001	ptrh1	72	58.242	Maylandia_zebra
MGP_CAROLIEiJ_G0023450	Ptrh1	100	90.686	ENSMAUG00000006266	Ptrh1	100	90.686	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023450	Ptrh1	99	83.663	ENSMICG00000005611	PTRH1	94	83.663	Microcebus_murinus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	92.157	ENSMOCG00000013992	Ptrh1	100	92.157	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023450	Ptrh1	87	58.757	ENSMMOG00000014747	ptrh1	64	58.242	Mola_mola
MGP_CAROLIEiJ_G0023450	Ptrh1	95	67.513	ENSMODG00000005503	PTRH1	90	67.513	Monodelphis_domestica
MGP_CAROLIEiJ_G0023450	Ptrh1	63	57.364	ENSMALG00000005392	ptrh1	75	57.364	Monopterus_albus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	99.020	ENSMUSG00000053746	Ptrh1	100	99.020	Mus_musculus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	99.510	MGP_PahariEiJ_G0024907	Ptrh1	100	99.510	Mus_pahari
MGP_CAROLIEiJ_G0023450	Ptrh1	100	99.020	MGP_SPRETEiJ_G0024367	Ptrh1	100	99.020	Mus_spretus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	77.670	ENSMPUG00000013790	PTRH1	94	77.670	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023450	Ptrh1	98	79.147	ENSMLUG00000013454	PTRH1	95	79.147	Myotis_lucifugus
MGP_CAROLIEiJ_G0023450	Ptrh1	99	84.729	ENSNGAG00000014008	Ptrh1	99	84.729	Nannospalax_galili
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	ENSNBRG00000015590	ptrh1	65	58.242	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.422	ENSNLEG00000017468	PTRH1	93	84.422	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023450	Ptrh1	95	48.454	ENSMEUG00000009694	-	96	48.454	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023450	Ptrh1	99	82.587	ENSODEG00000004012	PTRH1	93	83.838	Octodon_degus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	57.143	ENSONIG00000013912	ptrh1	70	57.143	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	64.467	ENSOANG00000011891	PTRH1	87	64.467	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	83.000	ENSOCUG00000006894	PTRH1	87	83.000	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023450	Ptrh1	99	84.080	ENSOGAG00000008094	PTRH1	96	84.080	Otolemur_garnettii
MGP_CAROLIEiJ_G0023450	Ptrh1	98	68.720	ENSOARG00000011808	PTRH1	95	68.720	Ovis_aries
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.422	ENSPPAG00000041782	PTRH1	93	84.422	Pan_paniscus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	78.173	ENSPPRG00000007889	PTRH1	92	78.173	Panthera_pardus
MGP_CAROLIEiJ_G0023450	Ptrh1	57	80.172	ENSPTIG00000021082	-	91	80.172	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.422	ENSPTRG00000021394	PTRH1	93	84.422	Pan_troglodytes
MGP_CAROLIEiJ_G0023450	Ptrh1	97	73.000	ENSPANG00000031755	PTRH1	92	73.000	Papio_anubis
MGP_CAROLIEiJ_G0023450	Ptrh1	88	55.556	ENSPKIG00000005449	ptrh1	60	55.556	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023450	Ptrh1	95	56.701	ENSPSIG00000013828	PTRH1	71	56.701	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023450	Ptrh1	83	52.941	ENSPMGG00000002148	ptrh1	62	53.757	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023450	Ptrh1	100	90.196	ENSPEMG00000014360	Ptrh1	100	90.196	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.791	ENSPFOG00000003715	ptrh1	69	58.791	Poecilia_formosa
MGP_CAROLIEiJ_G0023450	Ptrh1	86	59.429	ENSPLAG00000023354	ptrh1	70	59.429	Poecilia_latipinna
MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.791	ENSPMEG00000000447	ptrh1	69	58.791	Poecilia_mexicana
MGP_CAROLIEiJ_G0023450	Ptrh1	89	59.341	ENSPREG00000012612	ptrh1	69	59.341	Poecilia_reticulata
MGP_CAROLIEiJ_G0023450	Ptrh1	98	80.402	ENSPPYG00000019628	PTRH1	87	80.402	Pongo_abelii
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.000	ENSPCAG00000007016	PTRH1	93	84.000	Procavia_capensis
MGP_CAROLIEiJ_G0023450	Ptrh1	99	84.158	ENSPCOG00000014541	PTRH1	94	84.158	Propithecus_coquereli
MGP_CAROLIEiJ_G0023450	Ptrh1	98	85.500	ENSPVAG00000000954	PTRH1	93	85.500	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	ENSPNYG00000007789	ptrh1	65	58.242	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023450	Ptrh1	86	59.429	ENSPNAG00000029930	ptrh1	66	59.429	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023450	Ptrh1	100	96.078	ENSRNOG00000049034	Ptrh1	100	96.078	Rattus_norvegicus
MGP_CAROLIEiJ_G0023450	Ptrh1	97	84.080	ENSRBIG00000027290	PTRH1	94	84.080	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023450	Ptrh1	97	84.080	ENSRROG00000028799	PTRH1	88	84.080	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023450	Ptrh1	98	82.915	ENSSBOG00000026699	PTRH1	87	82.915	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023450	Ptrh1	96	66.169	ENSSHAG00000018238	PTRH1	98	66.169	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023450	Ptrh1	96	57.653	ENSSFOG00015007053	ptrh1	92	57.653	Scleropages_formosus
MGP_CAROLIEiJ_G0023450	Ptrh1	88	55.080	ENSSMAG00000016747	ptrh1	79	55.080	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023450	Ptrh1	86	54.286	ENSSDUG00000013471	ptrh1	92	54.386	Seriola_dumerili
MGP_CAROLIEiJ_G0023450	Ptrh1	80	56.364	ENSSLDG00000024662	ptrh1	80	55.495	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023450	Ptrh1	95	58.549	ENSSPUG00000000040	PTRH1	85	58.549	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.564	ENSSPAG00000003298	ptrh1	90	58.564	Stegastes_partitus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	84.500	ENSSSCG00000005615	PTRH1	93	84.500	Sus_scrofa
MGP_CAROLIEiJ_G0023450	Ptrh1	66	67.910	ENSTGUG00000003648	PTRH1	100	67.910	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023450	Ptrh1	86	55.429	ENSTRUG00000019801	PTRH1	67	55.495	Takifugu_rubripes
MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.523	ENSTNIG00000016735	ptrh1	78	58.523	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023450	Ptrh1	63	84.783	ENSTBEG00000001921	-	60	84.783	Tupaia_belangeri
MGP_CAROLIEiJ_G0023450	Ptrh1	97	79.695	ENSTTRG00000016458	PTRH1	92	79.695	Tursiops_truncatus
MGP_CAROLIEiJ_G0023450	Ptrh1	98	81.910	ENSUAMG00000023948	-	90	81.910	Ursus_americanus
MGP_CAROLIEiJ_G0023450	Ptrh1	87	67.978	ENSVPAG00000001805	PTRH1	98	67.978	Vicugna_pacos
MGP_CAROLIEiJ_G0023450	Ptrh1	99	80.198	ENSVVUG00000013198	PTRH1	91	80.198	Vulpes_vulpes
MGP_CAROLIEiJ_G0023450	Ptrh1	87	56.180	ENSXETG00000009980	ptrh1	95	56.180	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023450	Ptrh1	84	59.649	ENSXCOG00000011498	ptrh1	73	59.649	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.242	ENSXMAG00000009256	ptrh1	69	58.242	Xiphophorus_maculatus