EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023696 (Gene tree)
Gene ID: 110312549
Gene Symbol: -
Alias: -
Full Name: CWC22 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 64086 bases
Position: chr2:72679253-72743338
Accession: 110312549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0052478	MA3	PF02847.17	3.1e-23	1	1
MGP_CAROLIEiJ_P0052478	MIF4G	PF02854.19	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0052481	-	2020	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052480	-	1064	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052483	-	691	-	MGP_CAROLIEiJ_P0052483	140 (aa)	-	-
MGP_CAROLIEiJ_T0052482	-	1894	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052485	-	419	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052484	-	543	-	MGP_CAROLIEiJ_P0052484	110 (aa)	-	-
MGP_CAROLIEiJ_T0052486	-	504	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052478	-	2609	-	MGP_CAROLIEiJ_P0052478	735 (aa)	-	-
MGP_CAROLIEiJ_T0052479	-	3275	-	MGP_CAROLIEiJ_P0052479	903 (aa)	XP_021041897	UPI000A31811A

Gene Model

Click here to download MGP_CAROLIEiJ_G0023696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023696	-	90	93.103	ENSG00000163510	CWC22	99	87.802	Homo_sapiens
MGP_CAROLIEiJ_G0023696	-	76	80.605	ENSAPOG00000004200	cwc22	86	67.880	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023696	-	100	84.615	ENSAMEG00000011004	CWC22	100	84.725	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023696	-	80	81.356	ENSACIG00000020055	cwc22	88	71.009	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023696	-	80	81.368	ENSAPEG00000002673	cwc22	59	82.253	Amphiprion_percula
MGP_CAROLIEiJ_G0023696	-	80	82.906	ENSATEG00000005176	cwc22	61	78.981	Anabas_testudineus
MGP_CAROLIEiJ_G0023696	-	90	81.118	ENSACAG00000009438	CWC22	94	69.977	Anolis_carolinensis
MGP_CAROLIEiJ_G0023696	-	100	83.480	ENSANAG00000028324	CWC22	100	83.370	Aotus_nancymaae
MGP_CAROLIEiJ_G0023696	-	80	81.538	ENSACLG00000025447	cwc22	91	77.674	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023696	-	100	83.168	ENSBTAG00000021726	CWC22	99	83.278	Bos_taurus
MGP_CAROLIEiJ_G0023696	-	73	55.229	WBGene00002957	let-858	85	46.506	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0023696	-	100	85.385	ENSCAFG00000014160	CWC22	99	85.275	Canis_familiaris
MGP_CAROLIEiJ_G0023696	-	97	86.117	ENSCAFG00020007223	CWC22	97	92.718	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023696	-	100	83.168	ENSCHIG00000017150	CWC22	99	83.278	Capra_hircus
MGP_CAROLIEiJ_G0023696	-	95	72.885	ENSTSYG00000026635	-	96	71.462	Carlito_syrichta
MGP_CAROLIEiJ_G0023696	-	96	74.625	ENSTSYG00000028686	-	98	74.651	Carlito_syrichta
MGP_CAROLIEiJ_G0023696	-	84	86.677	ENSTSYG00000035591	-	99	73.984	Carlito_syrichta
MGP_CAROLIEiJ_G0023696	-	100	84.725	ENSTSYG00000000218	-	100	83.516	Carlito_syrichta
MGP_CAROLIEiJ_G0023696	-	90	80.539	ENSCAPG00000002064	CWC22	96	81.028	Cavia_aperea
MGP_CAROLIEiJ_G0023696	-	90	92.006	ENSCPOG00000007492	CWC22	100	83.352	Cavia_porcellus
MGP_CAROLIEiJ_G0023696	-	100	79.515	ENSCCAG00000021239	CWC22	100	79.405	Cebus_capucinus
MGP_CAROLIEiJ_G0023696	-	100	85.039	ENSCATG00000035788	CWC22	100	83.608	Cercocebus_atys
MGP_CAROLIEiJ_G0023696	-	99	84.590	ENSCLAG00000011118	CWC22	100	84.479	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023696	-	100	83.278	ENSCSAG00000012925	CWC22	100	83.718	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023696	-	90	83.208	ENSCHOG00000006362	CWC22	88	82.960	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023696	-	90	83.735	ENSCPBG00000001765	CWC22	100	70.678	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023696	-	76	67.684	ENSCING00000008865	-	92	58.300	Ciona_intestinalis
MGP_CAROLIEiJ_G0023696	-	76	66.487	ENSCSAVG00000003537	-	83	73.182	Ciona_savignyi
MGP_CAROLIEiJ_G0023696	-	90	93.703	ENSCANG00000013762	CWC22	100	83.388	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023696	-	98	93.923	ENSCGRG00001017005	-	100	91.069	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023696	-	100	91.069	ENSCGRG00000001934	-	100	91.069	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023696	-	76	75.714	ENSCSEG00000005257	cwc22	63	74.271	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023696	-	77	82.923	ENSCVAG00000009836	cwc22	74	69.054	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023696	-	79	82.474	ENSDARG00000014008	cwc22	90	64.738	Danio_rerio
MGP_CAROLIEiJ_G0023696	-	81	71.026	ENSDNOG00000032640	-	90	65.923	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023696	-	100	83.680	ENSDNOG00000003020	-	100	84.118	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023696	-	99	83.942	ENSDORG00000011483	-	99	83.278	Dipodomys_ordii
MGP_CAROLIEiJ_G0023696	-	74	64.727	FBgn0086707	ncm	50	57.481	Drosophila_melanogaster
MGP_CAROLIEiJ_G0023696	-	90	80.810	ENSETEG00000013355	CWC22	94	80.568	Echinops_telfairi
MGP_CAROLIEiJ_G0023696	-	100	85.165	ENSEASG00005022287	CWC22	99	83.626	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023696	-	100	85.275	ENSECAG00000010769	CWC22	99	83.846	Equus_caballus
MGP_CAROLIEiJ_G0023696	-	81	94.700	ENSEEUG00000005336	CWC22	78	94.035	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023696	-	80	82.203	ENSELUG00000010536	cwc22	92	77.534	Esox_lucius
MGP_CAROLIEiJ_G0023696	-	100	84.945	ENSFCAG00000018982	CWC22	99	84.725	Felis_catus
MGP_CAROLIEiJ_G0023696	-	90	81.454	ENSFALG00000003495	CWC22	99	67.904	Ficedula_albicollis
MGP_CAROLIEiJ_G0023696	-	90	92.470	ENSFDAG00000010857	CWC22	100	82.392	Fukomys_damarensis
MGP_CAROLIEiJ_G0023696	-	74	84.432	ENSFHEG00000009620	cwc22	77	68.296	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023696	-	85	77.460	ENSGMOG00000009084	cwc22	93	79.602	Gadus_morhua
MGP_CAROLIEiJ_G0023696	-	90	80.602	ENSGALG00000009001	CWC22	100	67.663	Gallus_gallus
MGP_CAROLIEiJ_G0023696	-	75	83.666	ENSGAFG00000021155	cwc22	97	67.662	Gambusia_affinis
MGP_CAROLIEiJ_G0023696	-	80	81.197	ENSGACG00000002071	cwc22	93	68.750	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023696	-	90	83.333	ENSGAGG00000013471	CWC22	100	70.197	Gopherus_agassizii
MGP_CAROLIEiJ_G0023696	-	90	93.103	ENSGGOG00000012484	CWC22	100	83.297	Gorilla_gorilla
MGP_CAROLIEiJ_G0023696	-	77	81.579	ENSHBUG00000010504	cwc22	63	82.888	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023696	-	90	92.470	ENSHGLG00000005692	CWC22	100	83.499	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023696	-	90	92.470	ENSHGLG00100016497	CWC22	96	89.537	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023696	-	76	82.406	ENSHCOG00000004206	cwc22	80	72.714	Hippocampus_comes
MGP_CAROLIEiJ_G0023696	-	76	86.047	ENSIPUG00000005831	cwc22	70	76.436	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023696	-	100	85.589	ENSSTOG00000009788	CWC22	100	86.139	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023696	-	100	85.055	ENSJJAG00000017012	-	100	85.385	Jaculus_jaculus
MGP_CAROLIEiJ_G0023696	-	81	80.236	ENSKMAG00000005228	cwc22	57	81.897	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023696	-	79	80.789	ENSLBEG00000020518	cwc22	74	74.339	Labrus_bergylta
MGP_CAROLIEiJ_G0023696	-	80	80.887	ENSLACG00000005916	CWC22	68	69.032	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023696	-	79	83.877	ENSLOCG00000006456	cwc22	92	63.547	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023696	-	90	91.754	ENSLAFG00000014802	CWC22	100	81.441	Loxodonta_africana
MGP_CAROLIEiJ_G0023696	-	90	93.383	ENSMFAG00000000590	CWC22	100	83.260	Macaca_fascicularis
MGP_CAROLIEiJ_G0023696	-	100	78.658	ENSMMUG00000020642	CWC22	100	79.011	Macaca_mulatta
MGP_CAROLIEiJ_G0023696	-	90	93.383	ENSMNEG00000034567	CWC22	100	83.608	Macaca_nemestrina
MGP_CAROLIEiJ_G0023696	-	90	93.403	ENSMLEG00000042344	CWC22	100	83.828	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023696	-	84	78.571	ENSMAMG00000018888	cwc22	75	66.625	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023696	-	80	82.222	ENSMZEG00005021449	cwc22	63	76.631	Maylandia_zebra
MGP_CAROLIEiJ_G0023696	-	82	84.426	ENSMGAG00000009220	CWC22	99	68.450	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023696	-	71	97.313	ENSMAUG00000016154	-	95	88.627	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023696	-	89	94.360	ENSMICG00000016919	CWC22	99	83.241	Microcebus_murinus
MGP_CAROLIEiJ_G0023696	-	83	74.062	ENSMMOG00000019720	cwc22	92	71.385	Mola_mola
MGP_CAROLIEiJ_G0023696	-	90	88.120	ENSMODG00000010233	-	100	75.851	Monodelphis_domestica
MGP_CAROLIEiJ_G0023696	-	76	82.194	ENSMODG00000020117	-	100	82.194	Monodelphis_domestica
MGP_CAROLIEiJ_G0023696	-	75	82.130	ENSMODG00000003711	-	100	82.130	Monodelphis_domestica
MGP_CAROLIEiJ_G0023696	-	100	97.566	ENSMUSG00000027014	Cwc22	100	97.928	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000094336	Gm13693	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000096484	Gm13696	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.502	ENSMUSG00000096729	Gm13695	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000079247	Gm13691	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000096337	Gm13694	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000095824	Gm13697	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	91	96.588	ENSMUSG00000094125	Gm13698	99	96.502	Mus_musculus
MGP_CAROLIEiJ_G0023696	-	100	97.554	MGP_PahariEiJ_G0025147	-	100	97.554	Mus_pahari
MGP_CAROLIEiJ_G0023696	-	100	83.828	ENSMPUG00000002432	CWC22	99	84.598	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023696	-	90	91.867	ENSMLUG00000024966	-	97	86.839	Myotis_lucifugus
MGP_CAROLIEiJ_G0023696	-	88	86.426	ENSMLUG00000013437	-	98	85.455	Myotis_lucifugus
MGP_CAROLIEiJ_G0023696	-	99	76.360	ENSNGAG00000013881	-	98	90.820	Nannospalax_galili
MGP_CAROLIEiJ_G0023696	-	51	74.670	ENSNBRG00000019380	cwc22	93	73.791	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023696	-	100	82.857	ENSNLEG00000006248	CWC22	100	83.187	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023696	-	77	83.894	ENSMEUG00000011026	CWC22	99	84.712	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023696	-	73	97.447	ENSOPRG00000007844	CWC22	84	87.561	Ochotona_princeps
MGP_CAROLIEiJ_G0023696	-	74	89.597	ENSODEG00000005934	-	83	89.076	Octodon_degus
MGP_CAROLIEiJ_G0023696	-	78	95.340	ENSODEG00000007673	CWC22	93	94.615	Octodon_degus
MGP_CAROLIEiJ_G0023696	-	90	84.535	ENSOANG00000008649	CWC22	100	77.113	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023696	-	83	78.664	ENSORLG00000010538	cwc22	68	76.444	Oryzias_latipes
MGP_CAROLIEiJ_G0023696	-	83	78.664	ENSORLG00020015117	cwc22	68	76.444	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023696	-	83	78.922	ENSORLG00015018073	cwc22	68	76.444	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023696	-	84	80.325	ENSOMEG00000015199	cwc22	76	83.733	Oryzias_melastigma
MGP_CAROLIEiJ_G0023696	-	99	84.538	ENSOGAG00000015287	CWC22	99	84.316	Otolemur_garnettii
MGP_CAROLIEiJ_G0023696	-	100	82.967	ENSOARG00000016905	CWC22	99	83.077	Ovis_aries
MGP_CAROLIEiJ_G0023696	-	100	82.618	ENSPPAG00000027833	CWC22	100	82.288	Pan_paniscus
MGP_CAROLIEiJ_G0023696	-	100	85.055	ENSPPRG00000001389	CWC22	99	84.835	Panthera_pardus
MGP_CAROLIEiJ_G0023696	-	100	85.055	ENSPTIG00000019139	CWC22	99	84.835	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023696	-	90	93.103	ENSPTRG00000012698	CWC22	100	83.407	Pan_troglodytes
MGP_CAROLIEiJ_G0023696	-	90	93.403	ENSPANG00000018976	CWC22	100	83.828	Papio_anubis
MGP_CAROLIEiJ_G0023696	-	77	84.119	ENSPKIG00000021346	cwc22	68	80.102	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023696	-	90	82.609	ENSPSIG00000008632	CWC22	100	71.133	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023696	-	64	75.174	ENSPMGG00000020129	cwc22	58	77.448	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023696	-	99	80.330	ENSPEMG00000023936	-	99	80.066	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023696	-	84	73.927	ENSPMAG00000005914	cwc22	93	66.874	Petromyzon_marinus
MGP_CAROLIEiJ_G0023696	-	90	87.801	ENSPCIG00000009903	-	92	87.743	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023696	-	76	85.152	ENSPFOG00000015025	cwc22	87	76.471	Poecilia_formosa
MGP_CAROLIEiJ_G0023696	-	77	82.862	ENSPLAG00000021405	cwc22	77	67.690	Poecilia_latipinna
MGP_CAROLIEiJ_G0023696	-	76	83.542	ENSPMEG00000007850	cwc22	72	70.104	Poecilia_mexicana
MGP_CAROLIEiJ_G0023696	-	76	80.755	ENSPREG00000004312	cwc22	85	66.797	Poecilia_reticulata
MGP_CAROLIEiJ_G0023696	-	90	93.253	ENSPPYG00000012986	CWC22	100	83.626	Pongo_abelii
MGP_CAROLIEiJ_G0023696	-	99	81.808	ENSPCAG00000011882	CWC22	99	82.031	Procavia_capensis
MGP_CAROLIEiJ_G0023696	-	81	95.332	ENSPCOG00000010195	CWC22	100	70.582	Propithecus_coquereli
MGP_CAROLIEiJ_G0023696	-	100	82.728	ENSPVAG00000011497	CWC22	99	83.828	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023696	-	80	79.316	ENSPNYG00000010435	cwc22	91	75.194	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023696	-	99	92.402	ENSRNOG00000012651	Cwc22	99	92.402	Rattus_norvegicus
MGP_CAROLIEiJ_G0023696	-	99	90.656	ENSRNOG00000038322	LOC500684	100	90.211	Rattus_norvegicus
MGP_CAROLIEiJ_G0023696	-	99	79.241	ENSRBIG00000036751	CWC22	99	78.579	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023696	-	90	93.403	ENSRROG00000037520	CWC22	100	83.498	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023696	-	68	30.769	YGR278W	-	84	30.667	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0023696	-	99	82.819	ENSSBOG00000021683	CWC22	100	81.938	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023696	-	86	88.994	ENSSHAG00000016596	-	99	76.678	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023696	-	90	71.795	ENSSHAG00000004040	-	91	70.808	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023696	-	70	83.008	ENSSFOG00015010559	cwc22	62	85.214	Scleropages_formosus
MGP_CAROLIEiJ_G0023696	-	80	78.632	ENSSMAG00000004724	cwc22	66	72.879	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023696	-	80	80.678	ENSSDUG00000010656	cwc22	64	76.959	Seriola_dumerili
MGP_CAROLIEiJ_G0023696	-	76	82.801	ENSSLDG00000023157	cwc22	84	81.356	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023696	-	68	97.727	ENSSARG00000013596	-	64	95.028	Sorex_araneus
MGP_CAROLIEiJ_G0023696	-	85	81.051	ENSSPUG00000006395	CWC22	99	68.337	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023696	-	80	81.197	ENSSPAG00000008746	cwc22	62	78.662	Stegastes_partitus
MGP_CAROLIEiJ_G0023696	-	100	83.754	ENSSSCG00000016008	CWC22	99	83.315	Sus_scrofa
MGP_CAROLIEiJ_G0023696	-	89	82.389	ENSTGUG00000009340	-	100	68.942	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023696	-	83	77.414	ENSTRUG00000014411	cwc22	67	74.351	Takifugu_rubripes
MGP_CAROLIEiJ_G0023696	-	75	80.674	ENSTNIG00000005074	cwc22	88	71.935	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023696	-	95	70.588	ENSTBEG00000014539	CWC22	95	68.973	Tupaia_belangeri
MGP_CAROLIEiJ_G0023696	-	90	92.204	ENSTTRG00000012142	CWC22	99	81.608	Tursiops_truncatus
MGP_CAROLIEiJ_G0023696	-	100	85.071	ENSUAMG00000010342	CWC22	99	91.457	Ursus_americanus
MGP_CAROLIEiJ_G0023696	-	100	85.165	ENSUMAG00000016730	CWC22	99	84.945	Ursus_maritimus
MGP_CAROLIEiJ_G0023696	-	90	92.654	ENSVPAG00000008565	CWC22	73	92.676	Vicugna_pacos
MGP_CAROLIEiJ_G0023696	-	100	85.039	ENSVVUG00000009738	CWC22	99	85.149	Vulpes_vulpes
MGP_CAROLIEiJ_G0023696	-	90	78.519	ENSXETG00000014099	cwc22	87	80.000	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023696	-	76	83.005	ENSXMAG00000013201	cwc22	69	73.164	Xiphophorus_maculatus