EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023709 (Gene tree)
Gene ID: 110286989
Gene Symbol: -
Alias: -
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 41342 bases
Position: chr2:75288530-75329871
Accession: 110286989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0052550	Nup35_RRM	PF05172.13	1.8e-26	1	1
MGP_CAROLIEiJ_P0052550	Nup35_RRM_2	PF14605.6	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0052552	-	496	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0052551	-	653	-	MGP_CAROLIEiJ_P0052551	197 (aa)	-	-
MGP_CAROLIEiJ_T0052550	-	1559	XM_021153689	MGP_CAROLIEiJ_P0052550	325 (aa)	XP_021009348	UPI000A3196A1
MGP_CAROLIEiJ_T0052548	-	2508	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSG00000163002	NUP35	100	98.684	Homo_sapiens
MGP_CAROLIEiJ_G0023709	-	96	59.621	ENSAPOG00000003630	nup35	99	59.621	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023709	-	100	92.705	ENSAMEG00000001191	NUP35	100	92.705	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023709	-	79	60.232	ENSACIG00000023984	nup35	98	60.232	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023709	-	96	59.937	ENSAOCG00000007484	nup35	99	59.875	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023709	-	96	59.937	ENSAPEG00000020027	nup35	99	59.937	Amphiprion_percula
MGP_CAROLIEiJ_G0023709	-	96	59.365	ENSATEG00000019305	nup35	99	59.365	Anabas_testudineus
MGP_CAROLIEiJ_G0023709	-	99	82.099	ENSAPLG00000009161	NUP35	99	82.099	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023709	-	100	78.116	ENSACAG00000008692	NUP35	100	78.116	Anolis_carolinensis
MGP_CAROLIEiJ_G0023709	-	100	92.025	ENSANAG00000021090	NUP35	100	92.025	Aotus_nancymaae
MGP_CAROLIEiJ_G0023709	-	96	58.055	ENSACLG00000013918	nup35	99	58.055	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023709	-	97	73.968	ENSAMXG00000003371	nup35	100	74.110	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023709	-	100	93.578	ENSBTAG00000009777	NUP35	100	93.578	Bos_taurus
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSCJAG00000011104	NUP35	100	92.945	Callithrix_jacchus
MGP_CAROLIEiJ_G0023709	-	95	92.949	ENSCAFG00000031849	NUP35	100	92.949	Canis_familiaris
MGP_CAROLIEiJ_G0023709	-	100	92.097	ENSCAFG00020008408	NUP35	100	92.097	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023709	-	95	94.194	ENSCHIG00000023148	NUP35	100	94.194	Capra_hircus
MGP_CAROLIEiJ_G0023709	-	100	92.308	ENSTSYG00000002117	NUP35	100	92.308	Carlito_syrichta
MGP_CAROLIEiJ_G0023709	-	100	75.076	ENSCAPG00000005703	NUP35	100	75.684	Cavia_aperea
MGP_CAROLIEiJ_G0023709	-	100	91.743	ENSCPOG00000011906	NUP35	100	92.355	Cavia_porcellus
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSCCAG00000025009	NUP35	100	92.945	Cebus_capucinus
MGP_CAROLIEiJ_G0023709	-	100	78.834	ENSCATG00000033109	NUP35	100	78.834	Cercocebus_atys
MGP_CAROLIEiJ_G0023709	-	100	91.131	ENSCLAG00000012559	NUP35	100	91.131	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSCSAG00000012620	NUP35	100	92.945	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023709	-	100	83.486	ENSCPBG00000001303	NUP35	100	83.486	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023709	-	95	41.066	ENSCING00000009659	-	97	41.066	Ciona_intestinalis
MGP_CAROLIEiJ_G0023709	-	95	44.023	ENSCSAVG00000007467	-	99	44.023	Ciona_savignyi
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSCANG00000030785	NUP35	100	93.528	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023709	-	100	96.615	ENSCGRG00001018638	-	100	96.615	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023709	-	100	96.615	ENSCGRG00000011313	-	100	96.615	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023709	-	96	57.862	ENSCSEG00000000938	nup35	99	57.862	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023709	-	96	59.937	ENSCVAG00000001792	nup35	99	59.937	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023709	-	95	71.704	ENSDARG00000012222	nup35	100	71.521	Danio_rerio
MGP_CAROLIEiJ_G0023709	-	100	92.661	ENSDNOG00000009513	-	88	92.661	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023709	-	100	92.049	ENSDNOG00000038754	-	100	92.049	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023709	-	100	92.331	ENSDORG00000010458	-	100	92.331	Dipodomys_ordii
MGP_CAROLIEiJ_G0023709	-	96	92.013	ENSETEG00000005896	NUP35	100	92.013	Echinops_telfairi
MGP_CAROLIEiJ_G0023709	-	96	55.077	ENSEBUG00000013034	nup35	99	54.799	Eptatretus_burgeri
MGP_CAROLIEiJ_G0023709	-	100	92.966	ENSEASG00005022100	NUP35	100	92.966	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023709	-	99	92.638	ENSECAG00000003968	NUP35	100	92.903	Equus_caballus
MGP_CAROLIEiJ_G0023709	-	100	83.180	ENSEEUG00000008469	NUP35	100	83.180	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023709	-	96	75.159	ENSELUG00000013693	nup35	100	75.161	Esox_lucius
MGP_CAROLIEiJ_G0023709	-	100	91.185	ENSFCAG00000025636	NUP35	100	91.667	Felis_catus
MGP_CAROLIEiJ_G0023709	-	100	80.183	ENSFALG00000013175	NUP35	100	80.183	Ficedula_albicollis
MGP_CAROLIEiJ_G0023709	-	100	92.025	ENSFDAG00000017998	NUP35	100	92.025	Fukomys_damarensis
MGP_CAROLIEiJ_G0023709	-	96	59.621	ENSFHEG00000010229	nup35	99	60.252	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023709	-	78	55.642	ENSGMOG00000003337	nup35	100	55.642	Gadus_morhua
MGP_CAROLIEiJ_G0023709	-	100	80.734	ENSGALG00000002689	NUP35	100	80.734	Gallus_gallus
MGP_CAROLIEiJ_G0023709	-	96	58.675	ENSGAFG00000022048	nup35	99	59.306	Gambusia_affinis
MGP_CAROLIEiJ_G0023709	-	96	59.365	ENSGACG00000008203	nup35	99	59.365	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023709	-	95	84.566	ENSGAGG00000001967	NUP35	100	84.566	Gopherus_agassizii
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSGGOG00000009919	NUP35	100	93.252	Gorilla_gorilla
MGP_CAROLIEiJ_G0023709	-	96	77.143	ENSHGLG00000008616	-	96	77.143	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023709	-	100	92.049	ENSHGLG00000013230	NUP35	100	92.049	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023709	-	96	72.293	ENSHGLG00000000414	-	97	72.293	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023709	-	96	77.143	ENSHGLG00100000091	-	96	77.143	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023709	-	96	72.293	ENSHGLG00100010869	-	97	72.293	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023709	-	100	92.049	ENSHGLG00100012840	NUP35	100	92.049	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023709	-	96	58.413	ENSHCOG00000003882	nup35	99	58.413	Hippocampus_comes
MGP_CAROLIEiJ_G0023709	-	100	65.951	ENSIPUG00000002798	nup35	100	65.951	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023709	-	100	93.538	ENSSTOG00000000711	NUP35	100	93.538	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023709	-	100	78.834	ENSJJAG00000007003	-	98	78.834	Jaculus_jaculus
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSJJAG00000016432	-	100	93.252	Jaculus_jaculus
MGP_CAROLIEiJ_G0023709	-	99	85.358	ENSJJAG00000017434	-	99	85.358	Jaculus_jaculus
MGP_CAROLIEiJ_G0023709	-	85	86.282	ENSJJAG00000006387	-	93	86.282	Jaculus_jaculus
MGP_CAROLIEiJ_G0023709	-	96	57.812	ENSKMAG00000011162	nup35	98	58.750	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023709	-	96	47.799	ENSLBEG00000012416	nup35	99	47.799	Labrus_bergylta
MGP_CAROLIEiJ_G0023709	-	95	78.778	ENSLACG00000008247	NUP35	100	78.778	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023709	-	96	71.019	ENSLOCG00000006726	nup35	99	71.019	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023709	-	100	91.566	ENSLAFG00000008155	NUP35	100	91.566	Loxodonta_africana
MGP_CAROLIEiJ_G0023709	-	100	92.638	ENSMFAG00000000834	NUP35	100	93.204	Macaca_fascicularis
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSMMUG00000004140	NUP35	100	92.945	Macaca_mulatta
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSMNEG00000029014	NUP35	100	92.945	Macaca_nemestrina
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSMLEG00000035422	NUP35	100	93.528	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023709	-	96	59.177	ENSMAMG00000013232	nup35	99	58.255	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023709	-	97	58.951	ENSMZEG00005020619	nup35	95	58.951	Maylandia_zebra
MGP_CAROLIEiJ_G0023709	-	100	77.676	ENSMGAG00000004412	NUP35	100	77.676	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023709	-	100	96.308	ENSMAUG00000013776	-	100	96.308	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023709	-	100	92.966	ENSMICG00000006790	NUP35	100	94.194	Microcebus_murinus
MGP_CAROLIEiJ_G0023709	-	100	95.385	ENSMOCG00000014754	-	100	95.385	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023709	-	97	57.812	ENSMMOG00000005026	nup35	99	57.911	Mola_mola
MGP_CAROLIEiJ_G0023709	-	100	85.846	ENSMODG00000010578	NUP35	100	85.846	Monodelphis_domestica
MGP_CAROLIEiJ_G0023709	-	96	58.934	ENSMALG00000020187	nup35	99	58.934	Monopterus_albus
MGP_CAROLIEiJ_G0023709	-	100	99.077	ENSMUSG00000026999	Nup35	100	99.077	Mus_musculus
MGP_CAROLIEiJ_G0023709	-	100	98.769	MGP_PahariEiJ_G0025160	-	100	98.769	Mus_pahari
MGP_CAROLIEiJ_G0023709	-	81	86.288	MGP_SPRETEiJ_G0033063	-	100	86.288	Mus_spretus
MGP_CAROLIEiJ_G0023709	-	100	93.009	ENSMPUG00000002063	NUP35	100	93.009	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023709	-	100	92.661	ENSMLUG00000013154	NUP35	100	92.661	Myotis_lucifugus
MGP_CAROLIEiJ_G0023709	-	100	92.923	ENSNGAG00000012107	-	100	92.923	Nannospalax_galili
MGP_CAROLIEiJ_G0023709	-	96	58.307	ENSNBRG00000020466	nup35	97	59.248	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSNLEG00000035026	NUP35	100	93.851	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023709	-	65	65.258	ENSMEUG00000003001	-	65	65.258	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023709	-	78	91.016	ENSOPRG00000016609	NUP35	78	91.016	Ochotona_princeps
MGP_CAROLIEiJ_G0023709	-	100	92.049	ENSODEG00000011202	-	100	92.049	Octodon_degus
MGP_CAROLIEiJ_G0023709	-	99	66.769	ENSODEG00000000280	-	99	66.769	Octodon_degus
MGP_CAROLIEiJ_G0023709	-	96	58.750	ENSONIG00000016251	nup35	99	57.622	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023709	-	71	84.746	ENSOANG00000006793	-	97	84.746	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSOCUG00000014407	NUP35	100	93.252	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023709	-	96	59.248	ENSORLG00000013588	nup35	100	59.236	Oryzias_latipes
MGP_CAROLIEiJ_G0023709	-	96	59.248	ENSORLG00020008201	nup35	99	59.248	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023709	-	96	60.000	ENSORLG00015011096	nup35	100	60.000	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023709	-	96	58.934	ENSOMEG00000007628	nup35	99	58.934	Oryzias_melastigma
MGP_CAROLIEiJ_G0023709	-	100	92.355	ENSOGAG00000011920	NUP35	100	92.966	Otolemur_garnettii
MGP_CAROLIEiJ_G0023709	-	100	94.495	ENSOARG00000016728	NUP35	100	94.495	Ovis_aries
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSPPAG00000036316	NUP35	100	93.851	Pan_paniscus
MGP_CAROLIEiJ_G0023709	-	100	91.185	ENSPPRG00000024726	NUP35	100	91.987	Panthera_pardus
MGP_CAROLIEiJ_G0023709	-	100	91.489	ENSPTIG00000017299	NUP35	100	91.489	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023709	-	100	93.252	ENSPTRG00000012711	NUP35	100	93.851	Pan_troglodytes
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSPANG00000013686	NUP35	100	92.945	Papio_anubis
MGP_CAROLIEiJ_G0023709	-	95	72.756	ENSPKIG00000022051	nup35	99	72.756	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023709	-	95	84.194	ENSPSIG00000002146	NUP35	100	84.194	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023709	-	95	57.508	ENSPMGG00000022915	nup35	97	57.643	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023709	-	100	96.923	ENSPEMG00000014718	-	100	96.923	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023709	-	96	57.975	ENSPMAG00000006604	nup35	97	57.975	Petromyzon_marinus
MGP_CAROLIEiJ_G0023709	-	100	87.462	ENSPCIG00000015482	NUP35	100	87.462	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023709	-	96	58.360	ENSPFOG00000010020	nup35	99	58.991	Poecilia_formosa
MGP_CAROLIEiJ_G0023709	-	96	58.044	ENSPLAG00000005867	nup35	99	58.675	Poecilia_latipinna
MGP_CAROLIEiJ_G0023709	-	96	59.365	ENSPMEG00000010552	nup35	99	60.000	Poecilia_mexicana
MGP_CAROLIEiJ_G0023709	-	96	59.105	ENSPREG00000021005	nup35	99	59.744	Poecilia_reticulata
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSPPYG00000012998	-	80	92.945	Pongo_abelii
MGP_CAROLIEiJ_G0023709	-	96	65.495	ENSPCAG00000000605	NUP35	96	65.495	Procavia_capensis
MGP_CAROLIEiJ_G0023709	-	100	92.661	ENSPCOG00000024097	NUP35	100	93.272	Propithecus_coquereli
MGP_CAROLIEiJ_G0023709	-	100	93.578	ENSPVAG00000015908	NUP35	100	93.578	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023709	-	97	59.259	ENSPNYG00000012486	nup35	95	59.259	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023709	-	96	74.841	ENSPNAG00000005181	nup35	98	74.841	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023709	-	100	97.538	ENSRNOG00000009290	Nup35	100	97.538	Rattus_norvegicus
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSRBIG00000039427	NUP35	100	93.528	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023709	-	100	92.945	ENSRROG00000026525	NUP35	100	92.945	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023709	-	100	92.638	ENSSBOG00000018676	NUP35	100	92.638	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023709	-	100	87.156	ENSSHAG00000009746	NUP35	100	87.156	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023709	-	96	73.248	ENSSFOG00015002390	nup35	99	73.248	Scleropages_formosus
MGP_CAROLIEiJ_G0023709	-	96	58.095	ENSSMAG00000015651	nup35	99	58.095	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023709	-	99	56.966	ENSSDUG00000013118	nup35	99	57.944	Seriola_dumerili
MGP_CAROLIEiJ_G0023709	-	96	59.048	ENSSLDG00000018249	nup35	98	59.048	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023709	-	96	69.551	ENSSARG00000001535	-	100	69.551	Sorex_araneus
MGP_CAROLIEiJ_G0023709	-	100	79.817	ENSSPUG00000018651	NUP35	100	79.817	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023709	-	96	59.561	ENSSPAG00000018264	nup35	99	59.561	Stegastes_partitus
MGP_CAROLIEiJ_G0023709	-	100	93.272	ENSSSCG00000028949	NUP35	100	93.272	Sus_scrofa
MGP_CAROLIEiJ_G0023709	-	100	79.027	ENSTGUG00000011278	NUP35	100	79.027	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023709	-	90	55.932	ENSTRUG00000014111	nup35	99	55.932	Takifugu_rubripes
MGP_CAROLIEiJ_G0023709	-	98	51.572	ENSTNIG00000011568	nup35	97	51.572	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023709	-	100	89.602	ENSTBEG00000003328	NUP35	100	89.602	Tupaia_belangeri
MGP_CAROLIEiJ_G0023709	-	100	79.077	ENSTTRG00000002512	NUP35	100	79.077	Tursiops_truncatus
MGP_CAROLIEiJ_G0023709	-	61	93.909	ENSUAMG00000018696	-	96	93.909	Ursus_americanus
MGP_CAROLIEiJ_G0023709	-	93	92.484	ENSUMAG00000017104	NUP35	100	92.484	Ursus_maritimus
MGP_CAROLIEiJ_G0023709	-	100	93.884	ENSVPAG00000011898	NUP35	100	93.884	Vicugna_pacos
MGP_CAROLIEiJ_G0023709	-	95	93.269	ENSVVUG00000016832	NUP35	100	93.269	Vulpes_vulpes
MGP_CAROLIEiJ_G0023709	-	100	63.939	ENSXETG00000001335	nup35	100	63.939	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023709	-	96	58.360	ENSXMAG00000000409	nup35	99	58.991	Xiphophorus_maculatus