EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023726 (Gene tree)
Gene ID: 110288417
Gene Symbol: Clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 5153 bases
Position: chr2:78933381-78938533
Accession: 110288417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0052632	Clp1	PF06807.14	2.1e-30	1	1
MGP_CAROLIEiJ_P0052633	Clp1	PF06807.14	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0052632	-	2547	XM_021154776	MGP_CAROLIEiJ_P0052632	425 (aa)	XP_021010435	UPI0000022AC0
MGP_CAROLIEiJ_T0052633	-	1900	-	MGP_CAROLIEiJ_P0052633	425 (aa)	-	UPI0000022AC0
MGP_CAROLIEiJ_T0052634	-	1197	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSG00000172409	CLP1	100	98.588	Homo_sapiens
MGP_CAROLIEiJ_G0023726	Clp1	98	76.415	ENSAPOG00000008242	clp1	96	76.415	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSAMEG00000014551	CLP1	98	99.059	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSACIG00000006310	clp1	97	74.769	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023726	Clp1	100	75.520	ENSAOCG00000010681	clp1	100	75.520	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023726	Clp1	99	75.463	ENSAPEG00000012165	clp1	99	76.415	Amphiprion_percula
MGP_CAROLIEiJ_G0023726	Clp1	99	75.694	ENSATEG00000012374	clp1	98	75.694	Anabas_testudineus
MGP_CAROLIEiJ_G0023726	Clp1	100	93.412	ENSACAG00000007139	CLP1	100	93.412	Anolis_carolinensis
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSANAG00000034935	CLP1	100	98.588	Aotus_nancymaae
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSACLG00000013573	clp1	98	74.769	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023726	Clp1	100	77.367	ENSAMXG00000014194	clp1	100	77.367	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSBTAG00000006493	CLP1	100	99.059	Bos_taurus
MGP_CAROLIEiJ_G0023726	Clp1	99	47.209	WBGene00010304	clpf-1	99	47.209	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSCJAG00000008748	CLP1	100	98.588	Callithrix_jacchus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSCAFG00000007815	CLP1	100	99.059	Canis_familiaris
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSCAFG00020000903	CLP1	100	99.059	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	ENSCHIG00000023497	CLP1	100	98.353	Capra_hircus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSTSYG00000006824	CLP1	99	98.588	Carlito_syrichta
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSCAPG00000009703	CLP1	100	98.824	Cavia_aperea
MGP_CAROLIEiJ_G0023726	Clp1	98	99.038	ENSCPOG00000012554	CLP1	99	99.038	Cavia_porcellus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	ENSCCAG00000031957	CLP1	100	98.353	Cebus_capucinus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSCATG00000044628	CLP1	100	98.588	Cercocebus_atys
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSCLAG00000004094	CLP1	100	98.824	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSCSAG00000005994	CLP1	100	98.588	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023726	Clp1	100	94.118	ENSCPBG00000016843	CLP1	100	94.118	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023726	Clp1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
MGP_CAROLIEiJ_G0023726	Clp1	99	63.121	ENSCSAVG00000003437	-	99	63.121	Ciona_savignyi
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSCANG00000034335	CLP1	100	98.588	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.294	ENSCGRG00001002227	CLP1	100	99.294	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023726	Clp1	100	99.294	ENSCGRG00000004328	CLP1	100	99.294	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023726	Clp1	99	74.014	ENSCSEG00000008614	clp1	98	74.014	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023726	Clp1	99	75.231	ENSCVAG00000020101	clp1	98	75.231	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023726	Clp1	97	79.475	ENSDARG00000063663	clp1	95	79.475	Danio_rerio
MGP_CAROLIEiJ_G0023726	Clp1	99	98.585	ENSDNOG00000042415	CLP1	90	98.585	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSDORG00000014685	Clp1	100	99.059	Dipodomys_ordii
MGP_CAROLIEiJ_G0023726	Clp1	99	55.634	FBgn0033842	cbc	99	55.634	Drosophila_melanogaster
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSETEG00000003009	CLP1	100	98.824	Echinops_telfairi
MGP_CAROLIEiJ_G0023726	Clp1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	ENSEASG00005002093	CLP1	100	98.353	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	ENSECAG00000011597	CLP1	100	98.353	Equus_caballus
MGP_CAROLIEiJ_G0023726	Clp1	100	97.882	ENSEEUG00000012771	CLP1	100	97.882	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023726	Clp1	97	79.097	ENSELUG00000024048	clp1	95	79.097	Esox_lucius
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSFCAG00000006633	CLP1	100	98.824	Felis_catus
MGP_CAROLIEiJ_G0023726	Clp1	100	91.765	ENSFALG00000011145	CLP1	100	91.765	Ficedula_albicollis
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSFDAG00000000234	CLP1	100	98.824	Fukomys_damarensis
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSFHEG00000014760	CLP1	98	74.537	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023726	Clp1	97	79.426	ENSGMOG00000019340	clp1	95	79.426	Gadus_morhua
MGP_CAROLIEiJ_G0023726	Clp1	100	92.471	ENSGALG00000007370	CLP1	100	92.471	Gallus_gallus
MGP_CAROLIEiJ_G0023726	Clp1	99	75.000	ENSGAFG00000003020	clp1	99	75.000	Gambusia_affinis
MGP_CAROLIEiJ_G0023726	Clp1	99	76.389	ENSGACG00000017832	clp1	98	76.389	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023726	Clp1	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSGGOG00000023006	CLP1	100	98.588	Gorilla_gorilla
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSHBUG00000010436	clp1	98	74.769	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSHGLG00000009914	CLP1	100	98.824	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSHGLG00100006105	CLP1	100	98.824	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023726	Clp1	99	76.322	ENSHCOG00000010072	clp1	99	76.322	Hippocampus_comes
MGP_CAROLIEiJ_G0023726	Clp1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSSTOG00000029257	CLP1	100	98.824	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	ENSJJAG00000023691	Clp1	100	98.353	Jaculus_jaculus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSKMAG00000011990	clp1	98	74.537	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023726	Clp1	99	75.926	ENSLBEG00000010201	clp1	98	75.926	Labrus_bergylta
MGP_CAROLIEiJ_G0023726	Clp1	100	85.176	ENSLACG00000003160	CLP1	100	85.176	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023726	Clp1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSLAFG00000014907	CLP1	100	98.588	Loxodonta_africana
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMFAG00000046074	CLP1	100	98.588	Macaca_fascicularis
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMMUG00000038007	CLP1	99	98.588	Macaca_mulatta
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMNEG00000000259	CLP1	100	98.588	Macaca_nemestrina
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMLEG00000043556	CLP1	100	98.588	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023726	Clp1	100	75.289	ENSMAMG00000002149	clp1	98	75.289	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSMZEG00005002850	clp1	98	74.769	Maylandia_zebra
MGP_CAROLIEiJ_G0023726	Clp1	100	92.471	ENSMGAG00000009643	CLP1	100	92.471	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMAUG00000016261	Clp1	100	98.588	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSMICG00000004895	CLP1	100	99.059	Microcebus_murinus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.529	ENSMOCG00000005498	Clp1	100	99.529	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023726	Clp1	99	76.852	ENSMMOG00000003229	clp1	98	76.852	Mola_mola
MGP_CAROLIEiJ_G0023726	Clp1	100	97.647	ENSMODG00000020107	-	100	97.647	Monodelphis_domestica
MGP_CAROLIEiJ_G0023726	Clp1	100	97.647	ENSMODG00000024148	-	100	97.647	Monodelphis_domestica
MGP_CAROLIEiJ_G0023726	Clp1	100	74.596	ENSMALG00000014239	clp1	98	74.596	Monopterus_albus
MGP_CAROLIEiJ_G0023726	Clp1	100	100.000	ENSMUSG00000027079	Clp1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.765	MGP_PahariEiJ_G0025177	Clp1	100	99.765	Mus_pahari
MGP_CAROLIEiJ_G0023726	Clp1	100	100.000	MGP_SPRETEiJ_G0024646	Clp1	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSMPUG00000000268	CLP1	100	99.059	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSMLUG00000007904	CLP1	100	98.588	Myotis_lucifugus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSNGAG00000006165	Clp1	100	98.824	Nannospalax_galili
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSNBRG00000005225	clp1	98	74.769	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023726	Clp1	82	93.939	ENSNLEG00000012809	-	100	93.939	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023726	Clp1	100	97.647	ENSMEUG00000010949	CLP1	99	97.647	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023726	Clp1	70	98.658	ENSOPRG00000007329	CLP1	100	98.658	Ochotona_princeps
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSODEG00000011410	CLP1	100	98.824	Octodon_degus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSONIG00000005089	clp1	98	74.537	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSOCUG00000007045	CLP1	100	98.824	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.074	ENSORLG00000003647	clp1	98	74.074	Oryzias_latipes
MGP_CAROLIEiJ_G0023726	Clp1	99	73.843	ENSORLG00020016676	clp1	98	73.843	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023726	Clp1	99	74.074	ENSORLG00015019484	clp1	98	74.074	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023726	Clp1	99	74.713	ENSOMEG00000021303	clp1	99	74.713	Oryzias_melastigma
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSOGAG00000004508	CLP1	100	98.824	Otolemur_garnettii
MGP_CAROLIEiJ_G0023726	Clp1	100	97.412	ENSOARG00000010145	CLP1	98	97.412	Ovis_aries
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSPPAG00000041519	CLP1	100	98.588	Pan_paniscus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSPPRG00000006135	CLP1	100	98.824	Panthera_pardus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	ENSPTIG00000015866	CLP1	100	98.824	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSPTRG00000047318	CLP1	100	98.588	Pan_troglodytes
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSPANG00000017078	CLP1	97	98.588	Papio_anubis
MGP_CAROLIEiJ_G0023726	Clp1	97	80.145	ENSPKIG00000007697	clp1	94	80.145	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023726	Clp1	95	91.542	ENSPSIG00000005468	CLP1	100	91.542	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023726	Clp1	99	76.512	ENSPMGG00000012171	clp1	98	76.512	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.529	ENSPEMG00000011213	-	100	99.529	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023726	Clp1	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
MGP_CAROLIEiJ_G0023726	Clp1	100	97.176	ENSPCIG00000011899	CLP1	99	97.176	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSPFOG00000008169	clp1	98	74.537	Poecilia_formosa
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSPLAG00000022388	clp1	99	74.478	Poecilia_latipinna
MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	ENSPMEG00000021088	clp1	99	74.478	Poecilia_mexicana
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSPREG00000017802	clp1	98	74.769	Poecilia_reticulata
MGP_CAROLIEiJ_G0023726	Clp1	53	98.661	ENSPPYG00000003266	-	100	98.661	Pongo_abelii
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSPCOG00000000360	CLP1	98	99.059	Propithecus_coquereli
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSPVAG00000016270	CLP1	100	99.059	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSPNYG00000017274	clp1	97	74.769	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023726	Clp1	97	80.000	ENSPNAG00000026460	clp1	95	80.048	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023726	Clp1	100	100.000	ENSRNOG00000007416	Clp1	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSRBIG00000018191	CLP1	100	98.588	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSRROG00000039265	CLP1	100	98.588	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023726	Clp1	96	79.064	ENSSBOG00000010558	-	93	79.064	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSSBOG00000032517	-	100	98.588	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023726	Clp1	100	97.882	ENSSHAG00000015695	CLP1	100	97.882	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023726	Clp1	97	78.824	ENSSFOG00015000628	clp1	96	78.824	Scleropages_formosus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSSMAG00000019423	clp1	97	74.769	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023726	Clp1	99	76.157	ENSSDUG00000014495	clp1	98	76.157	Seriola_dumerili
MGP_CAROLIEiJ_G0023726	Clp1	99	75.926	ENSSLDG00000000937	clp1	98	75.926	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023726	Clp1	52	98.206	ENSSARG00000002459	CLP1	100	98.206	Sorex_araneus
MGP_CAROLIEiJ_G0023726	Clp1	100	92.706	ENSSPUG00000016811	CLP1	100	92.706	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023726	Clp1	99	75.000	ENSSPAG00000016052	clp1	98	75.000	Stegastes_partitus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSSSCG00000031442	CLP1	100	99.059	Sus_scrofa
MGP_CAROLIEiJ_G0023726	Clp1	100	91.529	ENSTGUG00000007002	CLP1	100	91.529	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023726	Clp1	99	76.168	ENSTRUG00000012602	clp1	98	76.168	Takifugu_rubripes
MGP_CAROLIEiJ_G0023726	Clp1	99	75.701	ENSTNIG00000013125	clp1	98	75.701	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023726	Clp1	100	97.882	ENSTBEG00000009975	CLP1	100	97.882	Tupaia_belangeri
MGP_CAROLIEiJ_G0023726	Clp1	100	98.588	ENSTTRG00000002096	CLP1	100	98.588	Tursiops_truncatus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSUAMG00000011388	CLP1	100	99.059	Ursus_americanus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSUMAG00000018317	CLP1	100	99.059	Ursus_maritimus
MGP_CAROLIEiJ_G0023726	Clp1	100	99.059	ENSVVUG00000017138	CLP1	97	99.059	Vulpes_vulpes
MGP_CAROLIEiJ_G0023726	Clp1	98	77.458	ENSXETG00000007088	clp1	95	78.177	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSXCOG00000002287	clp1	98	74.769	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	ENSXMAG00000009783	clp1	98	74.769	Xiphophorus_maculatus