EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0023995 (Gene tree)
Gene ID
110284895
Gene Symbol
Alkbh3
Alias
1700108H04Rik|1810020C19Rik|Abh3|mABH3
Full Name
alkB homolog 3%2C alpha-ketoglutaratedependent dioxygenase
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
30596 bases
Position
chr2:88097773-88128368
Accession
110284895
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P00532822OG-FeII_Oxy_2PF13532.62.9e-2911
MGP_CAROLIEiJ_P00532802OG-FeII_Oxy_2PF13532.63e-2911
MGP_CAROLIEiJ_P00532852OG-FeII_Oxy_2PF13532.64.5e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0053279-706--- (aa)--
MGP_CAROLIEiJ_T0053281-487--- (aa)--
MGP_CAROLIEiJ_T0053288-765--- (aa)--
MGP_CAROLIEiJ_T0053284-706--- (aa)--
MGP_CAROLIEiJ_T0053285-896-MGP_CAROLIEiJ_P0053285202 (aa)--
MGP_CAROLIEiJ_T0053286-427--- (aa)--
MGP_CAROLIEiJ_T0053287-964--- (aa)--
MGP_CAROLIEiJ_T0053280-1421XM_021150893MGP_CAROLIEiJ_P0053280287 (aa)XP_021006552-
MGP_CAROLIEiJ_T0053278-758--- (aa)--
MGP_CAROLIEiJ_T0053282-1254-MGP_CAROLIEiJ_P0053282286 (aa)XP_021006560UPI000A3173DD
MGP_CAROLIEiJ_T0053283-825--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0023995's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023995's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0023995Alkbh36637.113MGP_CAROLIEiJ_G0027589Alkbh28037.113
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0023995Alkbh39986.316ENSG00000166199ALKBH39986.316Homo_sapiens
MGP_CAROLIEiJ_G0023995Alkbh39955.903ENSAPOG00000008495alkbh39555.903Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023995Alkbh39982.746ENSAMEG00000004842ALKBH39682.746Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023995Alkbh39854.804ENSACIG00000011887alkbh310054.804Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023995Alkbh39955.556ENSAOCG00000023500alkbh39555.556Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023995Alkbh39955.556ENSAPEG00000011723alkbh39555.556Amphiprion_percula
MGP_CAROLIEiJ_G0023995Alkbh39955.594ENSATEG00000021785alkbh39555.594Anabas_testudineus
MGP_CAROLIEiJ_G0023995Alkbh39849.495ENSACAG00000000855ALKBH39853.535Anolis_carolinensis
MGP_CAROLIEiJ_G0023995Alkbh39982.292ENSANAG00000033941ALKBH39982.292Aotus_nancymaae
MGP_CAROLIEiJ_G0023995Alkbh39954.737ENSACLG00000023226alkbh39654.737Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023995Alkbh39858.007ENSAMXG00000037076alkbh39858.007Astyanax_mexicanus
MGP_CAROLIEiJ_G0023995Alkbh39982.746ENSBTAG00000009518ALKBH39982.746Bos_taurus
MGP_CAROLIEiJ_G0023995Alkbh39882.746ENSCJAG00000011353ALKBH310082.746Callithrix_jacchus
MGP_CAROLIEiJ_G0023995Alkbh39982.746ENSCAFG00000006657ALKBH39883.039Canis_familiaris
MGP_CAROLIEiJ_G0023995Alkbh39982.394ENSCAFG00020006841ALKBH39882.686Canis_lupus_dingo
MGP_CAROLIEiJ_G0023995Alkbh39983.451ENSCHIG00000017579ALKBH39983.451Capra_hircus
MGP_CAROLIEiJ_G0023995Alkbh39983.451ENSTSYG00000005498ALKBH39983.451Carlito_syrichta
MGP_CAROLIEiJ_G0023995Alkbh39978.947ENSCAPG00000004995ALKBH39978.947Cavia_aperea
MGP_CAROLIEiJ_G0023995Alkbh39981.053ENSCPOG00000005138ALKBH39981.053Cavia_porcellus
MGP_CAROLIEiJ_G0023995Alkbh39982.639ENSCCAG00000036907ALKBH39982.639Cebus_capucinus
MGP_CAROLIEiJ_G0023995Alkbh39985.263ENSCATG00000035646ALKBH39985.263Cercocebus_atys
MGP_CAROLIEiJ_G0023995Alkbh39981.404ENSCLAG00000016579ALKBH39981.404Chinchilla_lanigera
MGP_CAROLIEiJ_G0023995Alkbh39984.211ENSCSAG00000005539ALKBH39984.211Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023995Alkbh39981.882ENSCHOG00000001407ALKBH39981.882Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023995Alkbh310068.512ENSCPBG00000012575ALKBH310068.512Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023995Alkbh35256.667ENSCING00000007764-9756.667Ciona_intestinalis
MGP_CAROLIEiJ_G0023995Alkbh39642.806ENSCSAVG00000000783-9842.806Ciona_savignyi
MGP_CAROLIEiJ_G0023995Alkbh39984.912ENSCANG00000018698ALKBH39984.912Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023995Alkbh39989.085ENSCGRG00001014489Alkbh39989.085Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023995Alkbh39989.085ENSCGRG00000017661Alkbh39989.085Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023995Alkbh39953.710ENSCSEG00000000814alkbh39553.710Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023995Alkbh39954.930ENSCVAG00000009432alkbh39554.930Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023995Alkbh39956.690ENSDARG00000045606alkbh39756.690Danio_rerio
MGP_CAROLIEiJ_G0023995Alkbh39983.039ENSDNOG00000036652ALKBH39983.039Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023995Alkbh310083.916ENSDORG00000000083Alkbh310083.916Dipodomys_ordii
MGP_CAROLIEiJ_G0023995Alkbh39983.392ENSEASG00005014856ALKBH39683.392Equus_asinus_asinus
MGP_CAROLIEiJ_G0023995Alkbh39983.746ENSECAG00000010673ALKBH39683.746Equus_caballus
MGP_CAROLIEiJ_G0023995Alkbh310053.465ENSEEUG00000002183ALKBH37756.951Erinaceus_europaeus
MGP_CAROLIEiJ_G0023995Alkbh39750.714ENSELUG00000003260alkbh39450.714Esox_lucius
MGP_CAROLIEiJ_G0023995Alkbh39984.507ENSFCAG00000029461ALKBH39984.507Felis_catus
MGP_CAROLIEiJ_G0023995Alkbh39869.039ENSFALG00000012361ALKBH39869.039Ficedula_albicollis
MGP_CAROLIEiJ_G0023995Alkbh310080.769ENSFDAG00000012666ALKBH310080.769Fukomys_damarensis
MGP_CAROLIEiJ_G0023995Alkbh39954.064ENSFHEG00000018735alkbh39554.064Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023995Alkbh39954.514ENSGMOG00000019146alkbh39654.514Gadus_morhua
MGP_CAROLIEiJ_G0023995Alkbh39465.799ENSGALG00000041309ALKBH36965.799Gallus_gallus
MGP_CAROLIEiJ_G0023995Alkbh39954.167ENSGAFG00000005814alkbh39752.273Gambusia_affinis
MGP_CAROLIEiJ_G0023995Alkbh39953.873ENSGACG00000006950alkbh39953.873Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023995Alkbh37075.500ENSGAGG00000013151ALKBH39975.500Gopherus_agassizii
MGP_CAROLIEiJ_G0023995Alkbh39985.965ENSGGOG00000001931ALKBH39985.965Gorilla_gorilla
MGP_CAROLIEiJ_G0023995Alkbh39954.737ENSHBUG00000008513alkbh39654.737Haplochromis_burtoni
MGP_CAROLIEiJ_G0023995Alkbh310079.371ENSHGLG00000019437ALKBH310081.818Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023995Alkbh39976.000ENSHGLG00100004468ALKBH310074.476Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023995Alkbh39856.184ENSIPUG00000017036alkbh39856.184Ictalurus_punctatus
MGP_CAROLIEiJ_G0023995Alkbh39884.342ENSSTOG00000006060ALKBH310084.342Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023995Alkbh39979.930ENSJJAG00000018577-9879.930Jaculus_jaculus
MGP_CAROLIEiJ_G0023995Alkbh39953.521ENSKMAG00000006499alkbh39553.521Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023995Alkbh39954.577ENSLBEG00000004226alkbh39554.577Labrus_bergylta
MGP_CAROLIEiJ_G0023995Alkbh39861.111ENSLACG00000017208ALKBH39961.111Latimeria_chalumnae
MGP_CAROLIEiJ_G0023995Alkbh39855.674ENSLOCG00000001237alkbh310055.674Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023995Alkbh39983.099ENSLAFG00000003441ALKBH39983.099Loxodonta_africana
MGP_CAROLIEiJ_G0023995Alkbh39984.912ENSMFAG00000031334ALKBH39984.912Macaca_fascicularis
MGP_CAROLIEiJ_G0023995Alkbh39984.912ENSMNEG00000042403ALKBH39984.912Macaca_nemestrina
MGP_CAROLIEiJ_G0023995Alkbh39984.912ENSMLEG00000038324ALKBH39984.912Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023995Alkbh39955.594ENSMAMG00000023051alkbh39555.594Mastacembelus_armatus
MGP_CAROLIEiJ_G0023995Alkbh39954.737ENSMZEG00005011786alkbh39654.737Maylandia_zebra
MGP_CAROLIEiJ_G0023995Alkbh37866.071ENSMGAG00000010479ALKBH39966.071Meleagris_gallopavo
MGP_CAROLIEiJ_G0023995Alkbh310088.112ENSMAUG00000009317Alkbh310088.112Mesocricetus_auratus
MGP_CAROLIEiJ_G0023995Alkbh39985.211ENSMICG00000014651ALKBH39985.211Microcebus_murinus
MGP_CAROLIEiJ_G0023995Alkbh39985.664ENSMOCG00000012816Alkbh39985.664Microtus_ochrogaster
MGP_CAROLIEiJ_G0023995Alkbh39948.611ENSMMOG00000020327alkbh39348.421Mola_mola
MGP_CAROLIEiJ_G0023995Alkbh38278.298ENSMODG00000019863-9578.298Monodelphis_domestica
MGP_CAROLIEiJ_G0023995Alkbh39955.245ENSMALG00000017888alkbh39555.245Monopterus_albus
MGP_CAROLIEiJ_G0023995Alkbh310097.213ENSMUSG00000040174Alkbh310097.213Mus_musculus
MGP_CAROLIEiJ_G0023995Alkbh310095.545MGP_PahariEiJ_G0025431Alkbh310095.545Mus_pahari
MGP_CAROLIEiJ_G0023995Alkbh310097.561MGP_SPRETEiJ_G0024905Alkbh310097.561Mus_spretus
MGP_CAROLIEiJ_G0023995Alkbh39983.099ENSMPUG00000006151ALKBH39983.099Mustela_putorius_furo
MGP_CAROLIEiJ_G0023995Alkbh39983.451ENSMLUG00000029289ALKBH39983.451Myotis_lucifugus
MGP_CAROLIEiJ_G0023995Alkbh39985.159ENSNGAG00000004591Alkbh39985.159Nannospalax_galili
MGP_CAROLIEiJ_G0023995Alkbh39951.930ENSNBRG00000016311alkbh39651.930Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023995Alkbh39984.561ENSNLEG00000027521ALKBH39984.561Nomascus_leucogenys
MGP_CAROLIEiJ_G0023995Alkbh37380.000ENSMEUG00000007604ALKBH39980.000Notamacropus_eugenii
MGP_CAROLIEiJ_G0023995Alkbh310081.119ENSOPRG00000006771ALKBH310081.119Ochotona_princeps
MGP_CAROLIEiJ_G0023995Alkbh39982.867ENSODEG00000017204ALKBH39982.867Octodon_degus
MGP_CAROLIEiJ_G0023995Alkbh39955.088ENSONIG00000015605alkbh39754.895Oreochromis_niloticus
MGP_CAROLIEiJ_G0023995Alkbh39868.772ENSOANG00000009208ALKBH39768.772Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023995Alkbh310081.250ENSOCUG00000016359ALKBH310081.250Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023995Alkbh39955.944ENSORLG00000001437alkbh39555.944Oryzias_latipes
MGP_CAROLIEiJ_G0023995Alkbh39949.261ENSORLG00020002409alkbh39654.054Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023995Alkbh39955.944ENSORLG00015016266alkbh39555.944Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023995Alkbh39955.594ENSOMEG00000003835alkbh39555.594Oryzias_melastigma
MGP_CAROLIEiJ_G0023995Alkbh310085.664ENSOGAG00000009107ALKBH39785.664Otolemur_garnettii
MGP_CAROLIEiJ_G0023995Alkbh39983.099ENSOARG00000001123ALKBH39983.099Ovis_aries
MGP_CAROLIEiJ_G0023995Alkbh39986.316ENSPPAG00000028729ALKBH39986.316Pan_paniscus
MGP_CAROLIEiJ_G0023995Alkbh39984.155ENSPPRG00000005278ALKBH39984.155Panthera_pardus
MGP_CAROLIEiJ_G0023995Alkbh39982.394ENSPTIG00000019393ALKBH39982.394Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023995Alkbh39986.316ENSPTRG00000003523ALKBH39986.316Pan_troglodytes
MGP_CAROLIEiJ_G0023995Alkbh39980.836ENSPANG00000003104ALKBH39980.836Papio_anubis
MGP_CAROLIEiJ_G0023995Alkbh39854.417ENSPKIG00000021815alkbh39851.711Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023995Alkbh39962.500ENSPSIG00000011933ALKBH39666.376Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023995Alkbh39948.592ENSPMGG00000008862alkbh39348.592Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023995Alkbh39987.324ENSPEMG00000019372Alkbh39987.324Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023995Alkbh39850.000ENSPMAG00000001119alkbh39953.543Petromyzon_marinus
MGP_CAROLIEiJ_G0023995Alkbh39972.183ENSPCIG00000021794ALKBH39772.183Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023995Alkbh39954.861ENSPFOG00000002705alkbh39554.861Poecilia_formosa
MGP_CAROLIEiJ_G0023995Alkbh39954.355ENSPLAG00000002355alkbh39554.355Poecilia_latipinna
MGP_CAROLIEiJ_G0023995Alkbh39954.167ENSPMEG00000004476alkbh39554.167Poecilia_mexicana
MGP_CAROLIEiJ_G0023995Alkbh39955.208ENSPREG00000005505alkbh39055.208Poecilia_reticulata
MGP_CAROLIEiJ_G0023995Alkbh39984.561ENSPPYG00000003342ALKBH39784.561Pongo_abelii
MGP_CAROLIEiJ_G0023995Alkbh39980.919ENSPCAG00000002955ALKBH39980.919Procavia_capensis
MGP_CAROLIEiJ_G0023995Alkbh310084.615ENSPCOG00000020139ALKBH310084.615Propithecus_coquereli
MGP_CAROLIEiJ_G0023995Alkbh310081.818ENSPVAG00000011569ALKBH310081.818Pteropus_vampyrus
MGP_CAROLIEiJ_G0023995Alkbh39954.737ENSPNYG00000010362alkbh39654.737Pundamilia_nyererei
MGP_CAROLIEiJ_G0023995Alkbh39958.246ENSPNAG00000015943alkbh39658.246Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023995Alkbh39992.982ENSRNOG00000021678Alkbh39792.982Rattus_norvegicus
MGP_CAROLIEiJ_G0023995Alkbh39984.211ENSRBIG00000034161ALKBH39984.211Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023995Alkbh39984.211ENSRROG00000042173ALKBH39984.211Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023995Alkbh39982.292ENSSBOG00000023947ALKBH39982.292Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023995Alkbh39971.228ENSSHAG00000006189ALKBH39871.228Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023995Alkbh310054.167ENSSFOG00015003566alkbh39954.167Scleropages_formosus
MGP_CAROLIEiJ_G0023995Alkbh39955.208ENSSMAG00000004404alkbh39555.208Scophthalmus_maximus
MGP_CAROLIEiJ_G0023995Alkbh39953.169ENSSDUG00000000513alkbh39553.169Seriola_dumerili
MGP_CAROLIEiJ_G0023995Alkbh39953.497ENSSLDG00000003080alkbh39553.497Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023995Alkbh310066.782ENSSPUG00000005861ALKBH310066.782Sphenodon_punctatus
MGP_CAROLIEiJ_G0023995Alkbh39955.326ENSSPAG00000020713alkbh39455.326Stegastes_partitus
MGP_CAROLIEiJ_G0023995Alkbh39984.859ENSSSCG00000040937ALKBH39984.859Sus_scrofa
MGP_CAROLIEiJ_G0023995Alkbh38667.886ENSTGUG00000010222ALKBH39967.886Taeniopygia_guttata
MGP_CAROLIEiJ_G0023995Alkbh39951.399ENSTRUG00000021459alkbh38651.399Takifugu_rubripes
MGP_CAROLIEiJ_G0023995Alkbh39953.873ENSTNIG00000010385alkbh39653.873Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023995Alkbh310082.168ENSTBEG00000016697ALKBH310082.168Tupaia_belangeri
MGP_CAROLIEiJ_G0023995Alkbh39882.562ENSTTRG00000005121ALKBH39982.562Tursiops_truncatus
MGP_CAROLIEiJ_G0023995Alkbh39980.282ENSUAMG00000025129ALKBH39987.137Ursus_americanus
MGP_CAROLIEiJ_G0023995Alkbh39983.451ENSUMAG00000015602ALKBH39983.451Ursus_maritimus
MGP_CAROLIEiJ_G0023995Alkbh39984.859ENSVPAG00000000215ALKBH39984.859Vicugna_pacos
MGP_CAROLIEiJ_G0023995Alkbh39982.042ENSVVUG00000017283ALKBH39882.042Vulpes_vulpes
MGP_CAROLIEiJ_G0023995Alkbh39855.789ENSXETG00000022230alkbh39955.789Xenopus_tropicalis
MGP_CAROLIEiJ_G0023995Alkbh35858.788ENSXCOG00000000737alkbh36558.788Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023995Alkbh39954.861ENSXMAG00000013123alkbh39554.861Xiphophorus_maculatus

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