EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024130 (Gene tree)
Gene ID: 110289715
Gene Symbol: Rpusd2
Alias: 4921503C21Rik|BB231107
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5008 bases
Position: chr2:111859578-111864585
Accession: 110289715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0053801	PseudoU_synth_2	PF00849.22	1.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0053801	-	3040	-	MGP_CAROLIEiJ_P0053801	551 (aa)	XP_021011728	UPI000A3169E4

Gene Model

Click here to download MGP_CAROLIEiJ_G0024130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.106	ENSG00000166133	RPUSD2	100	76.106	Homo_sapiens
MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.606	ENSAPOG00000000817	rpusd2	84	57.495	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSAMEG00000016996	RPUSD2	100	77.240	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024130	Rpusd2	78	59.955	ENSACIG00000024029	rpusd2	91	59.259	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.205	ENSAOCG00000015237	rpusd2	84	56.173	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.298	ENSAPEG00000021763	rpusd2	84	56.263	Amphiprion_percula
MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.780	ENSATEG00000015242	rpusd2	82	56.289	Anabas_testudineus
MGP_CAROLIEiJ_G0024130	Rpusd2	75	65.558	ENSAPLG00000004723	RPUSD2	99	65.558	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024130	Rpusd2	78	67.421	ENSACAG00000013893	RPUSD2	91	67.421	Anolis_carolinensis
MGP_CAROLIEiJ_G0024130	Rpusd2	100	78.253	ENSANAG00000009691	RPUSD2	100	78.253	Aotus_nancymaae
MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.897	ENSACLG00000019531	rpusd2	83	56.341	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.438	ENSAMXG00000013376	rpusd2	99	51.471	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024130	Rpusd2	99	77.199	ENSBTAG00000003193	RPUSD2	99	78.470	Bos_taurus
MGP_CAROLIEiJ_G0024130	Rpusd2	72	35.787	WBGene00019498	K07E8.7	97	35.323	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.362	ENSCJAG00000020841	RPUSD2	100	77.362	Callithrix_jacchus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.703	ENSCAFG00000009165	RPUSD2	100	76.703	Canis_familiaris
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.703	ENSCAFG00020005849	RPUSD2	100	76.703	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024130	Rpusd2	99	77.240	ENSCHIG00000006152	RPUSD2	99	77.240	Capra_hircus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.165	ENSTSYG00000012844	RPUSD2	100	76.165	Carlito_syrichta
MGP_CAROLIEiJ_G0024130	Rpusd2	51	85.714	ENSCAPG00000006895	-	100	85.714	Cavia_aperea
MGP_CAROLIEiJ_G0024130	Rpusd2	96	79.702	ENSCPOG00000013201	RPUSD2	96	79.702	Cavia_porcellus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.385	ENSCCAG00000024378	RPUSD2	100	77.385	Cebus_capucinus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.283	ENSCATG00000043734	RPUSD2	100	76.283	Cercocebus_atys
MGP_CAROLIEiJ_G0024130	Rpusd2	99	79.159	ENSCLAG00000011862	RPUSD2	99	79.159	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024130	Rpusd2	94	79.096	ENSCSAG00000007538	RPUSD2	100	79.096	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024130	Rpusd2	61	83.673	ENSCHOG00000004834	RPUSD2	63	84.257	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024130	Rpusd2	85	61.736	ENSCPBG00000013419	RPUSD2	95	61.858	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.460	ENSCANG00000003659	RPUSD2	100	76.460	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	87.726	ENSCGRG00001009839	Rpusd2	97	87.726	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024130	Rpusd2	100	87.726	ENSCGRG00000012348	Rpusd2	100	87.726	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024130	Rpusd2	80	57.962	ENSCSEG00000001953	rpusd2	81	57.962	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024130	Rpusd2	78	61.451	ENSCVAG00000010848	rpusd2	88	58.078	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.478	ENSDARG00000060992	rpusd2	82	57.764	Danio_rerio
MGP_CAROLIEiJ_G0024130	Rpusd2	100	75.404	ENSDNOG00000047745	RPUSD2	100	75.404	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024130	Rpusd2	77	87.007	ENSDORG00000009092	Rpusd2	100	87.007	Dipodomys_ordii
MGP_CAROLIEiJ_G0024130	Rpusd2	76	47.537	FBgn0051719	RluA-1	63	47.537	Drosophila_melanogaster
MGP_CAROLIEiJ_G0024130	Rpusd2	76	48.853	FBgn0032256	RluA-2	78	48.853	Drosophila_melanogaster
MGP_CAROLIEiJ_G0024130	Rpusd2	100	73.118	ENSETEG00000008581	RPUSD2	100	73.118	Echinops_telfairi
MGP_CAROLIEiJ_G0024130	Rpusd2	75	35.469	ENSEBUG00000012149	rpusd2	89	34.490	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.565	ENSEASG00005016463	RPUSD2	99	76.565	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.744	ENSECAG00000024178	RPUSD2	99	76.744	Equus_caballus
MGP_CAROLIEiJ_G0024130	Rpusd2	96	66.916	ENSEEUG00000005132	RPUSD2	96	66.916	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024130	Rpusd2	80	59.023	ENSELUG00000016786	rpusd2	85	59.023	Esox_lucius
MGP_CAROLIEiJ_G0024130	Rpusd2	99	77.297	ENSFCAG00000040796	RPUSD2	98	77.297	Felis_catus
MGP_CAROLIEiJ_G0024130	Rpusd2	77	69.266	ENSFALG00000001122	RPUSD2	96	69.369	Ficedula_albicollis
MGP_CAROLIEiJ_G0024130	Rpusd2	94	79.580	ENSFDAG00000003070	RPUSD2	100	79.580	Fukomys_damarensis
MGP_CAROLIEiJ_G0024130	Rpusd2	85	56.187	ENSFHEG00000007518	rpusd2	89	56.187	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	59.556	ENSGMOG00000011014	rpusd2	99	57.732	Gadus_morhua
MGP_CAROLIEiJ_G0024130	Rpusd2	85	63.052	ENSGALG00000041216	RPUSD2	100	63.052	Gallus_gallus
MGP_CAROLIEiJ_G0024130	Rpusd2	96	52.072	ENSGAFG00000003390	rpusd2	99	52.072	Gambusia_affinis
MGP_CAROLIEiJ_G0024130	Rpusd2	84	52.896	ENSGACG00000008656	rpusd2	98	52.896	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024130	Rpusd2	87	63.469	ENSGAGG00000013098	RPUSD2	95	63.469	Gopherus_agassizii
MGP_CAROLIEiJ_G0024130	Rpusd2	100	75.986	ENSGGOG00000006684	RPUSD2	100	75.986	Gorilla_gorilla
MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.681	ENSHBUG00000023777	rpusd2	83	56.133	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.297	ENSHGLG00000012765	RPUSD2	100	77.297	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.297	ENSHGLG00100006653	RPUSD2	100	77.297	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024130	Rpusd2	80	56.994	ENSHCOG00000015587	rpusd2	81	56.994	Hippocampus_comes
MGP_CAROLIEiJ_G0024130	Rpusd2	87	56.151	ENSIPUG00000021006	rpusd2	86	56.151	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	78.712	ENSSTOG00000025619	RPUSD2	100	78.712	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	78.919	ENSJJAG00000023160	Rpusd2	100	80.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.155	ENSKMAG00000006618	rpusd2	86	55.684	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.081	ENSLBEG00000021571	rpusd2	87	54.709	Labrus_bergylta
MGP_CAROLIEiJ_G0024130	Rpusd2	78	64.912	ENSLACG00000017338	RPUSD2	100	64.912	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024130	Rpusd2	78	63.927	ENSLOCG00000014755	rpusd2	93	63.043	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024130	Rpusd2	98	76.965	ENSLAFG00000015588	RPUSD2	99	76.965	Loxodonta_africana
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.599	ENSMFAG00000045062	RPUSD2	100	77.599	Macaca_fascicularis
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSMMUG00000001483	RPUSD2	100	77.240	Macaca_mulatta
MGP_CAROLIEiJ_G0024130	Rpusd2	100	67.311	ENSMNEG00000041429	RPUSD2	100	67.311	Macaca_nemestrina
MGP_CAROLIEiJ_G0024130	Rpusd2	73	86.006	ENSMLEG00000036551	RPUSD2	97	86.006	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.042	ENSMAMG00000001077	rpusd2	82	55.070	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	56.897	ENSMZEG00005006947	rpusd2	91	56.341	Maylandia_zebra
MGP_CAROLIEiJ_G0024130	Rpusd2	81	67.245	ENSMGAG00000003058	RPUSD2	99	67.245	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024130	Rpusd2	100	88.628	ENSMAUG00000020467	Rpusd2	100	88.628	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024130	Rpusd2	99	78.324	ENSMICG00000028637	RPUSD2	99	78.324	Microcebus_murinus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	86.331	ENSMOCG00000020061	Rpusd2	100	86.331	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024130	Rpusd2	78	59.152	ENSMMOG00000012020	rpusd2	87	55.918	Mola_mola
MGP_CAROLIEiJ_G0024130	Rpusd2	85	74.896	ENSMODG00000000300	RPUSD2	88	74.896	Monodelphis_domestica
MGP_CAROLIEiJ_G0024130	Rpusd2	78	55.274	ENSMALG00000010024	rpusd2	83	54.418	Monopterus_albus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	98.192	ENSMUSG00000027324	Rpusd2	100	98.192	Mus_musculus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	96.383	MGP_PahariEiJ_G0025573	Rpusd2	100	96.383	Mus_pahari
MGP_CAROLIEiJ_G0024130	Rpusd2	100	97.107	MGP_SPRETEiJ_G0025046	Rpusd2	100	97.107	Mus_spretus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSMPUG00000008517	RPUSD2	100	77.240	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024130	Rpusd2	94	79.198	ENSMLUG00000007971	RPUSD2	99	79.198	Myotis_lucifugus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	80.576	ENSNGAG00000014126	Rpusd2	100	80.576	Nannospalax_galili
MGP_CAROLIEiJ_G0024130	Rpusd2	78	59.545	ENSNBRG00000010070	rpusd2	82	58.862	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.778	ENSNLEG00000035735	RPUSD2	100	77.778	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024130	Rpusd2	100	67.914	ENSMEUG00000008500	RPUSD2	100	67.914	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024130	Rpusd2	100	74.419	ENSOPRG00000014177	-	100	74.419	Ochotona_princeps
MGP_CAROLIEiJ_G0024130	Rpusd2	96	81.989	ENSODEG00000017193	RPUSD2	97	81.989	Octodon_degus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	60.138	ENSONIG00000020102	rpusd2	91	59.424	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.199	ENSOCUG00000015745	RPUSD2	97	77.199	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024130	Rpusd2	79	58.606	ENSORLG00000015516	rpusd2	83	58.606	Oryzias_latipes
MGP_CAROLIEiJ_G0024130	Rpusd2	83	56.379	ENSORLG00020010533	rpusd2	89	56.379	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024130	Rpusd2	79	58.940	ENSORLG00015009206	rpusd2	82	58.940	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024130	Rpusd2	84	55.828	ENSOMEG00000007355	rpusd2	80	57.083	Oryzias_melastigma
MGP_CAROLIEiJ_G0024130	Rpusd2	96	77.840	ENSOGAG00000004867	RPUSD2	100	77.840	Otolemur_garnettii
MGP_CAROLIEiJ_G0024130	Rpusd2	99	75.090	ENSOARG00000020235	RPUSD2	99	75.986	Ovis_aries
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.106	ENSPPAG00000032874	RPUSD2	100	76.106	Pan_paniscus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSPPRG00000010446	RPUSD2	100	77.240	Panthera_pardus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.419	ENSPTIG00000013316	RPUSD2	100	77.419	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.106	ENSPTRG00000006924	RPUSD2	100	76.106	Pan_troglodytes
MGP_CAROLIEiJ_G0024130	Rpusd2	100	75.929	ENSPANG00000019339	RPUSD2	100	75.929	Papio_anubis
MGP_CAROLIEiJ_G0024130	Rpusd2	69	72.531	ENSPKIG00000023017	rpusd2	62	66.396	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024130	Rpusd2	61	64.756	ENSPSIG00000012680	RPUSD2	99	64.756	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.469	ENSPMGG00000018165	rpusd2	80	57.718	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024130	Rpusd2	99	86.257	ENSPEMG00000012878	Rpusd2	99	86.257	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024130	Rpusd2	89	71.654	ENSPCIG00000023199	RPUSD2	95	71.654	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024130	Rpusd2	87	56.352	ENSPFOG00000006829	rpusd2	88	56.352	Poecilia_formosa
MGP_CAROLIEiJ_G0024130	Rpusd2	87	56.495	ENSPLAG00000022914	rpusd2	99	56.495	Poecilia_latipinna
MGP_CAROLIEiJ_G0024130	Rpusd2	87	56.352	ENSPMEG00000009835	rpusd2	99	56.352	Poecilia_mexicana
MGP_CAROLIEiJ_G0024130	Rpusd2	85	57.620	ENSPREG00000016441	rpusd2	84	57.620	Poecilia_reticulata
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.419	ENSPPYG00000006355	RPUSD2	100	77.419	Pongo_abelii
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.344	ENSPCOG00000028019	RPUSD2	100	76.344	Propithecus_coquereli
MGP_CAROLIEiJ_G0024130	Rpusd2	100	75.806	ENSPVAG00000001837	RPUSD2	100	75.806	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	59.817	ENSPNYG00000021507	rpusd2	90	59.121	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024130	Rpusd2	100	93.490	ENSRNOG00000010528	LOC100911166	100	93.490	Rattus_norvegicus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	93.490	ENSRNOG00000046797	Rpusd2	100	93.490	Rattus_norvegicus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSRBIG00000030813	RPUSD2	100	77.240	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.061	ENSRROG00000026664	RPUSD2	100	77.061	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024130	Rpusd2	50	46.853	YDL036C	-	61	46.853	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0024130	Rpusd2	53	47.973	YOL066C	RIB2	50	47.973	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.798	ENSSBOG00000035031	RPUSD2	100	78.253	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024130	Rpusd2	61	74.709	ENSSHAG00000015108	RPUSD2	91	74.709	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024130	Rpusd2	78	62.663	ENSSFOG00015019057	rpusd2	74	59.233	Scleropages_formosus
MGP_CAROLIEiJ_G0024130	Rpusd2	80	55.717	ENSSMAG00000000903	rpusd2	91	55.717	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024130	Rpusd2	90	52.545	ENSSDUG00000019139	rpusd2	91	53.333	Seriola_dumerili
MGP_CAROLIEiJ_G0024130	Rpusd2	90	52.182	ENSSLDG00000005938	rpusd2	91	52.973	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024130	Rpusd2	86	82.328	ENSSARG00000002792	RPUSD2	88	82.328	Sorex_araneus
MGP_CAROLIEiJ_G0024130	Rpusd2	80	63.834	ENSSPUG00000001206	RPUSD2	90	63.834	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.634	ENSSPAG00000003578	rpusd2	83	57.054	Stegastes_partitus
MGP_CAROLIEiJ_G0024130	Rpusd2	99	78.559	ENSSSCG00000036700	RPUSD2	99	78.559	Sus_scrofa
MGP_CAROLIEiJ_G0024130	Rpusd2	78	55.484	ENSTRUG00000025880	rpusd2	90	55.858	Takifugu_rubripes
MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.744	ENSTNIG00000017329	rpusd2	91	58.170	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024130	Rpusd2	100	68.996	ENSTBEG00000007933	RPUSD2	100	68.996	Tupaia_belangeri
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.240	ENSTTRG00000010585	RPUSD2	100	77.240	Tursiops_truncatus
MGP_CAROLIEiJ_G0024130	Rpusd2	94	79.962	ENSUAMG00000001470	RPUSD2	100	79.962	Ursus_americanus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.419	ENSUMAG00000012487	RPUSD2	88	77.419	Ursus_maritimus
MGP_CAROLIEiJ_G0024130	Rpusd2	100	75.986	ENSVPAG00000003844	RPUSD2	100	75.986	Vicugna_pacos
MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.703	ENSVVUG00000026590	RPUSD2	100	76.703	Vulpes_vulpes
MGP_CAROLIEiJ_G0024130	Rpusd2	82	65.319	ENSXETG00000015973	rpusd2	100	65.319	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024130	Rpusd2	87	55.918	ENSXMAG00000021821	rpusd2	99	55.918	Xiphophorus_maculatus