EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024135 (Gene tree)
Gene ID: 110289882
Gene Symbol: Dnajc17
Alias: 1700025B16Rik|D9Bwg1371e
Full Name: DnaJ heat shock protein family (Hsp40) member C17
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 35770 bases
Position: chr2:112001627-112037396
Accession: 110289882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0053822	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0053822	-	1008	XM_021156283	MGP_CAROLIEiJ_P0053822	303 (aa)	XP_021011942	UPI000A31B351
MGP_CAROLIEiJ_T0053824	-	616	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0053825	-	450	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.474	ENSG00000104129	DNAJC17	98	95.349	Homo_sapiens
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.427	ENSAPOG00000012644	dnajc17	97	67.427	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	83.660	ENSAMEG00000016923	DNAJC17	100	83.660	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024135	Dnajc17	90	66.788	ENSACIG00000014152	dnajc17	85	66.788	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.101	ENSAOCG00000012011	dnajc17	97	67.101	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.101	ENSAPEG00000000710	dnajc17	97	67.101	Amphiprion_percula
MGP_CAROLIEiJ_G0024135	Dnajc17	90	67.260	ENSATEG00000004347	dnajc17	95	67.260	Anabas_testudineus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	75.974	ENSAPLG00000003714	DNAJC17	98	75.649	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024135	Dnajc17	99	73.115	ENSACAG00000003311	DNAJC17	98	73.115	Anolis_carolinensis
MGP_CAROLIEiJ_G0024135	Dnajc17	100	90.461	ENSANAG00000035937	DNAJC17	100	90.461	Aotus_nancymaae
MGP_CAROLIEiJ_G0024135	Dnajc17	99	60.443	ENSACLG00000002917	dnajc17	98	60.127	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024135	Dnajc17	99	70.492	ENSAMXG00000042901	dnajc17	99	70.492	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	86.842	ENSBTAG00000013480	DNAJC17	100	86.842	Bos_taurus
MGP_CAROLIEiJ_G0024135	Dnajc17	80	80.816	ENSCJAG00000013145	-	88	81.224	Callithrix_jacchus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.145	ENSCJAG00000020803	DNAJC17	100	89.145	Callithrix_jacchus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSCAFG00000009322	DNAJC17	100	88.158	Canis_familiaris
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSCAFG00020005728	DNAJC17	100	88.158	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.171	ENSCHIG00000016432	DNAJC17	100	87.171	Capra_hircus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	89.109	ENSTSYG00000031602	DNAJC17	99	89.109	Carlito_syrichta
MGP_CAROLIEiJ_G0024135	Dnajc17	100	90.099	ENSCPOG00000014110	-	100	90.099	Cavia_porcellus
MGP_CAROLIEiJ_G0024135	Dnajc17	96	75.342	ENSCPOG00000031431	-	100	75.342	Cavia_porcellus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.474	ENSCCAG00000025567	-	100	89.474	Cebus_capucinus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSCATG00000043015	DNAJC17	100	88.158	Cercocebus_atys
MGP_CAROLIEiJ_G0024135	Dnajc17	100	91.419	ENSCLAG00000013931	DNAJC17	100	91.419	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSCSAG00000007570	DNAJC17	100	88.158	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.500	ENSCHOG00000009650	DNAJC17	100	87.500	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024135	Dnajc17	99	77.199	ENSCPBG00000013453	DNAJC17	98	76.873	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.500	ENSCANG00000037714	DNAJC17	100	87.500	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	94.719	ENSCGRG00001017285	Dnajc17	100	94.719	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024135	Dnajc17	100	94.719	ENSCGRG00000017089	Dnajc17	100	94.719	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.993	ENSCSEG00000000160	dnajc17	96	66.667	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.557	ENSCVAG00000012722	dnajc17	96	66.557	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	63.399	ENSDARG00000104959	dnajc17	99	63.399	Danio_rerio
MGP_CAROLIEiJ_G0024135	Dnajc17	97	87.797	ENSDNOG00000033742	DNAJC17	100	87.797	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	90.099	ENSDORG00000000579	Dnajc17	100	90.099	Dipodomys_ordii
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSEASG00005016444	DNAJC17	100	88.487	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.816	ENSECAG00000019839	DNAJC17	100	88.816	Equus_caballus
MGP_CAROLIEiJ_G0024135	Dnajc17	98	62.733	ENSELUG00000005126	dnajc17	97	62.733	Esox_lucius
MGP_CAROLIEiJ_G0024135	Dnajc17	100	90.461	ENSFCAG00000041783	DNAJC17	100	90.461	Felis_catus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	72.669	ENSFALG00000011719	DNAJC17	99	72.669	Ficedula_albicollis
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.769	ENSFDAG00000007247	DNAJC17	99	90.066	Fukomys_damarensis
MGP_CAROLIEiJ_G0024135	Dnajc17	97	65.677	ENSFHEG00000008815	dnajc17	96	65.677	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	62.252	ENSGMOG00000011377	dnajc17	96	62.252	Gadus_morhua
MGP_CAROLIEiJ_G0024135	Dnajc17	99	74.919	ENSGALG00000036432	DNAJC17	98	74.919	Gallus_gallus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.337	ENSGAFG00000017513	dnajc17	96	66.337	Gambusia_affinis
MGP_CAROLIEiJ_G0024135	Dnajc17	98	62.258	ENSGACG00000006184	dnajc17	98	62.258	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	75.896	ENSGAGG00000008259	DNAJC17	98	75.570	Gopherus_agassizii
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.474	ENSGGOG00000000051	DNAJC17	100	89.474	Gorilla_gorilla
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.124	ENSHBUG00000016261	dnajc17	97	66.124	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024135	Dnajc17	99	88.742	ENSHGLG00000009889	DNAJC17	99	88.742	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024135	Dnajc17	99	88.742	ENSHGLG00100011544	DNAJC17	99	88.742	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024135	Dnajc17	97	61.921	ENSHCOG00000018531	dnajc17	96	61.921	Hippocampus_comes
MGP_CAROLIEiJ_G0024135	Dnajc17	96	67.354	ENSIPUG00000019321	dnajc17	99	67.203	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024135	Dnajc17	87	90.909	ENSSTOG00000000355	DNAJC17	96	90.909	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.439	ENSJJAG00000011274	Dnajc17	100	89.439	Jaculus_jaculus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	64.169	ENSKMAG00000015647	dnajc17	97	64.169	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.647	ENSLBEG00000026224	dnajc17	97	66.993	Labrus_bergylta
MGP_CAROLIEiJ_G0024135	Dnajc17	99	71.656	ENSLACG00000016126	DNAJC17	98	71.656	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024135	Dnajc17	99	66.352	ENSLOCG00000012721	dnajc17	98	65.714	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.145	ENSLAFG00000014731	DNAJC17	100	89.145	Loxodonta_africana
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSMFAG00000032241	DNAJC17	100	88.487	Macaca_fascicularis
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSMMUG00000013160	DNAJC17	100	88.487	Macaca_mulatta
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSMNEG00000041956	DNAJC17	100	88.487	Macaca_nemestrina
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSMLEG00000017441	DNAJC17	100	88.158	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024135	Dnajc17	98	68.421	ENSMAMG00000007576	dnajc17	97	68.421	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.450	ENSMZEG00005027011	dnajc17	97	66.450	Maylandia_zebra
MGP_CAROLIEiJ_G0024135	Dnajc17	99	74.351	ENSMGAG00000002902	DNAJC17	97	74.351	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024135	Dnajc17	100	94.389	ENSMAUG00000020306	Dnajc17	100	94.389	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.829	ENSMICG00000026885	DNAJC17	100	87.829	Microcebus_murinus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	94.059	ENSMOCG00000004009	Dnajc17	100	94.059	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024135	Dnajc17	99	67.532	ENSMMOG00000002035	dnajc17	98	67.208	Mola_mola
MGP_CAROLIEiJ_G0024135	Dnajc17	85	70.588	ENSMALG00000006714	dnajc17	96	53.356	Monopterus_albus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	99.010	ENSMUSG00000034278	Dnajc17	100	99.010	Mus_musculus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	96.040	MGP_PahariEiJ_G0025578	Dnajc17	100	96.040	Mus_pahari
MGP_CAROLIEiJ_G0024135	Dnajc17	100	99.340	MGP_SPRETEiJ_G0025051	Dnajc17	100	99.340	Mus_spretus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSMPUG00000008744	DNAJC17	100	88.487	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024135	Dnajc17	92	83.214	ENSMLUG00000014835	-	100	85.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0024135	Dnajc17	98	83.893	ENSMLUG00000001084	-	98	81.208	Myotis_lucifugus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.769	ENSNGAG00000003110	Dnajc17	100	89.769	Nannospalax_galili
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.443	ENSNBRG00000001491	dnajc17	96	64.765	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024135	Dnajc17	76	86.900	ENSMEUG00000005641	DNAJC17	95	86.900	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024135	Dnajc17	87	65.660	ENSOPRG00000016047	DNAJC17	100	65.660	Ochotona_princeps
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.439	ENSODEG00000020472	-	100	89.439	Octodon_degus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.769	ENSODEG00000017135	-	100	89.769	Octodon_degus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.346	ENSONIG00000012139	dnajc17	97	66.346	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSOCUG00000005573	DNAJC17	100	85.526	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.224	ENSORLG00000016956	dnajc17	84	66.890	Oryzias_latipes
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.890	ENSORLG00020003890	dnajc17	94	65.172	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.224	ENSORLG00015018594	dnajc17	95	67.148	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.987	ENSOMEG00000018656	dnajc17	96	67.987	Oryzias_melastigma
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.500	ENSOGAG00000000528	DNAJC17	100	87.500	Otolemur_garnettii
MGP_CAROLIEiJ_G0024135	Dnajc17	100	86.842	ENSOARG00000020273	DNAJC17	100	86.842	Ovis_aries
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.816	ENSPPAG00000041971	DNAJC17	100	88.816	Pan_paniscus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	90.132	ENSPPRG00000010738	DNAJC17	100	90.132	Panthera_pardus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.145	ENSPTIG00000012441	DNAJC17	100	89.145	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.816	ENSPTRG00000006929	DNAJC17	100	88.816	Pan_troglodytes
MGP_CAROLIEiJ_G0024135	Dnajc17	100	81.908	ENSPANG00000019322	DNAJC17	100	81.908	Papio_anubis
MGP_CAROLIEiJ_G0024135	Dnajc17	99	78.333	ENSPSIG00000013165	DNAJC17	98	78.000	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024135	Dnajc17	98	67.230	ENSPMGG00000011399	dnajc17	97	67.230	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024135	Dnajc17	80	60.816	ENSPMAG00000004444	dnajc17	98	59.684	Petromyzon_marinus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.885	ENSPFOG00000010717	dnajc17	97	65.806	Poecilia_formosa
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.885	ENSPLAG00000008436	dnajc17	96	66.885	Poecilia_latipinna
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.785	ENSPMEG00000008136	dnajc17	97	67.785	Poecilia_mexicana
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.557	ENSPREG00000020755	dnajc17	97	66.557	Poecilia_reticulata
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.829	ENSPPYG00000006360	DNAJC17	100	87.829	Pongo_abelii
MGP_CAROLIEiJ_G0024135	Dnajc17	99	59.603	ENSPCAG00000000374	DNAJC17	99	59.603	Procavia_capensis
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSPCOG00000016152	DNAJC17	100	88.158	Propithecus_coquereli
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.158	ENSPVAG00000001843	DNAJC17	100	88.158	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024135	Dnajc17	99	66.775	ENSPNYG00000000618	dnajc17	98	66.775	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024135	Dnajc17	99	65.347	ENSPNAG00000020547	dnajc17	98	65.347	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024135	Dnajc17	100	97.030	ENSRNOG00000012368	Dnajc17	100	97.030	Rattus_norvegicus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSRBIG00000034194	DNAJC17	100	88.487	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSRROG00000030973	DNAJC17	100	88.487	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024135	Dnajc17	100	80.592	ENSSBOG00000032474	-	100	80.592	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024135	Dnajc17	96	67.320	ENSSFOG00015016491	dnajc17	97	67.197	Scleropages_formosus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	66.234	ENSSMAG00000006544	dnajc17	97	65.909	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	68.506	ENSSDUG00000009889	dnajc17	97	68.506	Seriola_dumerili
MGP_CAROLIEiJ_G0024135	Dnajc17	97	67.857	ENSSLDG00000004295	dnajc17	97	67.857	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024135	Dnajc17	85	75.940	ENSSPUG00000001286	DNAJC17	96	75.564	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024135	Dnajc17	95	63.211	ENSSPAG00000020028	dnajc17	98	63.211	Stegastes_partitus
MGP_CAROLIEiJ_G0024135	Dnajc17	87	88.636	ENSSSCG00000004762	DNAJC17	88	88.636	Sus_scrofa
MGP_CAROLIEiJ_G0024135	Dnajc17	99	73.616	ENSTGUG00000006661	DNAJC17	98	73.616	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024135	Dnajc17	97	61.667	ENSTRUG00000013840	dnajc17	97	61.333	Takifugu_rubripes
MGP_CAROLIEiJ_G0024135	Dnajc17	99	65.064	ENSTNIG00000017455	dnajc17	98	65.064	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024135	Dnajc17	100	68.421	ENSTBEG00000014488	DNAJC17	76	89.796	Tupaia_belangeri
MGP_CAROLIEiJ_G0024135	Dnajc17	100	87.908	ENSTTRG00000011417	DNAJC17	100	85.948	Tursiops_truncatus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.474	ENSUAMG00000016573	DNAJC17	100	89.474	Ursus_americanus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	88.487	ENSUMAG00000012443	DNAJC17	100	88.487	Ursus_maritimus
MGP_CAROLIEiJ_G0024135	Dnajc17	100	89.145	ENSVVUG00000026624	DNAJC17	100	89.145	Vulpes_vulpes
MGP_CAROLIEiJ_G0024135	Dnajc17	97	65.677	ENSXCOG00000011198	dnajc17	96	65.677	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024135	Dnajc17	97	65.574	ENSXMAG00000006791	dnajc17	96	65.574	Xiphophorus_maculatus