EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024144 (Gene tree)
Gene ID: 110306950
Gene Symbol: Ino80
Alias: 2310079N15Rik|4632409L19Rik|INO80|Inoc1
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 103579 bases
Position: chr2:112206903-112310481
Accession: 1915392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0053850	ResIII	PF04851.15	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0053851	-	3852	-	MGP_CAROLIEiJ_P0053851	1118 (aa)	-	-
MGP_CAROLIEiJ_T0053850	-	6589	-	MGP_CAROLIEiJ_P0053850	1588 (aa)	-	-
MGP_CAROLIEiJ_T0053852	-	404	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024144	Ino80	100	93.711	ENSG00000128908	INO80	100	98.256	Homo_sapiens
MGP_CAROLIEiJ_G0024144	Ino80	73	68.255	ENSAPOG00000012586	ino80	99	67.745	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.342	ENSAMEG00000016796	INO80	100	93.656	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024144	Ino80	91	72.374	ENSACIG00000001918	ino80	98	71.077	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024144	Ino80	98	72.240	ENSAOCG00000000490	ino80	99	70.683	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024144	Ino80	97	72.942	ENSAPEG00000022911	ino80	99	71.012	Amphiprion_percula
MGP_CAROLIEiJ_G0024144	Ino80	99	71.357	ENSATEG00000001271	ino80	100	70.345	Anabas_testudineus
MGP_CAROLIEiJ_G0024144	Ino80	100	87.547	ENSAPLG00000013656	INO80	100	87.547	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024144	Ino80	91	85.428	ENSACAG00000003531	INO80	99	85.566	Anolis_carolinensis
MGP_CAROLIEiJ_G0024144	Ino80	100	93.396	ENSANAG00000032223	INO80	100	93.396	Aotus_nancymaae
MGP_CAROLIEiJ_G0024144	Ino80	91	69.763	ENSACLG00000006610	ino80	99	68.823	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024144	Ino80	100	92.674	ENSBTAG00000010380	INO80	100	93.049	Bos_taurus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.333	ENSCJAG00000020770	-	100	92.893	Callithrix_jacchus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.400	ENSCAFG00000009492	INO80	100	93.400	Canis_familiaris
MGP_CAROLIEiJ_G0024144	Ino80	71	91.504	ENSCAFG00020005524	-	99	91.858	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024144	Ino80	100	93.028	ENSCHIG00000010246	INO80	100	93.175	Capra_hircus
MGP_CAROLIEiJ_G0024144	Ino80	100	94.025	ENSTSYG00000003252	INO80	100	94.025	Carlito_syrichta
MGP_CAROLIEiJ_G0024144	Ino80	100	93.711	ENSCPOG00000011386	INO80	100	93.459	Cavia_porcellus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.019	ENSCCAG00000030680	INO80	100	92.579	Cebus_capucinus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.648	ENSCATG00000040663	INO80	100	93.270	Cercocebus_atys
MGP_CAROLIEiJ_G0024144	Ino80	100	93.585	ENSCLAG00000008397	INO80	100	93.145	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSCSAG00000007632	INO80	100	93.396	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024144	Ino80	63	95.562	ENSCHOG00000011938	INO80	76	95.455	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024144	Ino80	100	87.673	ENSCPBG00000013491	INO80	100	87.673	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024144	Ino80	93	94.526	ENSCANG00000036208	INO80	99	93.037	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024144	Ino80	100	95.409	ENSCGRG00001013566	Ino80	100	95.409	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024144	Ino80	100	95.409	ENSCGRG00000001290	Ino80	100	95.409	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024144	Ino80	85	72.642	ENSCSEG00000019370	ino80	94	72.316	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024144	Ino80	97	72.025	ENSCVAG00000021470	ino80	100	70.407	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024144	Ino80	97	73.698	ENSDARG00000070432	ino80	97	73.756	Danio_rerio
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSDNOG00000010267	INO80	100	93.774	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024144	Ino80	62	63.128	ENSEBUG00000001921	ino80	96	62.177	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024144	Ino80	100	93.090	ENSEASG00005016405	INO80	100	93.342	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024144	Ino80	91	71.585	ENSELUG00000001071	ino80	96	71.084	Esox_lucius
MGP_CAROLIEiJ_G0024144	Ino80	100	93.467	ENSFCAG00000014722	INO80	100	93.781	Felis_catus
MGP_CAROLIEiJ_G0024144	Ino80	100	86.604	ENSFALG00000006125	INO80	100	86.415	Ficedula_albicollis
MGP_CAROLIEiJ_G0024144	Ino80	99	93.208	ENSFDAG00000005624	INO80	99	93.145	Fukomys_damarensis
MGP_CAROLIEiJ_G0024144	Ino80	62	72.093	ENSFHEG00000020436	ino80	88	71.429	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024144	Ino80	87	69.923	ENSGMOG00000006031	ino80	99	69.220	Gadus_morhua
MGP_CAROLIEiJ_G0024144	Ino80	100	87.547	ENSGALG00000008553	INO80	100	87.547	Gallus_gallus
MGP_CAROLIEiJ_G0024144	Ino80	97	72.363	ENSGAFG00000006358	ino80	98	72.798	Gambusia_affinis
MGP_CAROLIEiJ_G0024144	Ino80	97	70.193	ENSGACG00000012960	ino80	99	68.303	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024144	Ino80	96	88.348	ENSGAGG00000019203	INO80	99	88.348	Gopherus_agassizii
MGP_CAROLIEiJ_G0024144	Ino80	93	72.469	ENSHBUG00000022614	ino80	99	71.567	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024144	Ino80	100	93.019	ENSHGLG00000018136	INO80	100	93.019	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024144	Ino80	100	92.390	ENSHGLG00100006571	INO80	100	92.075	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024144	Ino80	97	71.990	ENSHCOG00000002445	ino80	96	71.818	Hippocampus_comes
MGP_CAROLIEiJ_G0024144	Ino80	94	72.196	ENSIPUG00000018905	ino80	97	72.329	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024144	Ino80	100	94.343	ENSSTOG00000000427	INO80	100	94.343	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024144	Ino80	100	88.868	ENSJJAG00000016166	Ino80	100	88.050	Jaculus_jaculus
MGP_CAROLIEiJ_G0024144	Ino80	91	71.448	ENSKMAG00000019273	ino80	99	70.508	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024144	Ino80	91	70.652	ENSLBEG00000024288	ino80	97	70.000	Labrus_bergylta
MGP_CAROLIEiJ_G0024144	Ino80	98	71.692	ENSLACG00000008666	INO80	99	71.501	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024144	Ino80	100	76.020	ENSLOCG00000012304	ino80	100	75.643	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.333	ENSLAFG00000009951	INO80	100	92.956	Loxodonta_africana
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSMFAG00000044488	INO80	100	93.396	Macaca_fascicularis
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSMMUG00000001737	INO80	100	93.396	Macaca_mulatta
MGP_CAROLIEiJ_G0024144	Ino80	100	93.585	ENSMNEG00000034906	INO80	100	93.208	Macaca_nemestrina
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSMLEG00000042117	INO80	100	93.396	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024144	Ino80	71	63.438	ENSMAMG00000013786	ino80	99	63.264	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024144	Ino80	91	72.335	ENSMZEG00005013146	ino80	99	71.217	Maylandia_zebra
MGP_CAROLIEiJ_G0024144	Ino80	84	88.077	ENSMGAG00000011164	INO80	99	87.481	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024144	Ino80	100	94.088	ENSMAUG00000020670	Ino80	100	94.088	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.082	ENSMICG00000005801	INO80	100	93.082	Microcebus_murinus
MGP_CAROLIEiJ_G0024144	Ino80	100	95.472	ENSMOCG00000016879	Ino80	100	95.472	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024144	Ino80	66	74.711	ENSMMOG00000015046	ino80	98	64.096	Mola_mola
MGP_CAROLIEiJ_G0024144	Ino80	100	91.132	ENSMODG00000000184	INO80	100	90.881	Monodelphis_domestica
MGP_CAROLIEiJ_G0024144	Ino80	91	70.808	ENSMALG00000016488	ino80	99	71.226	Monopterus_albus
MGP_CAROLIEiJ_G0024144	Ino80	100	96.667	ENSMUSG00000034154	Ino80	100	96.667	Mus_musculus
MGP_CAROLIEiJ_G0024144	Ino80	100	95.786	MGP_PahariEiJ_G0025587	Ino80	100	95.786	Mus_pahari
MGP_CAROLIEiJ_G0024144	Ino80	100	96.604	MGP_SPRETEiJ_G0025060	Ino80	100	96.604	Mus_spretus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.405	ENSMPUG00000008786	INO80	100	93.719	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024144	Ino80	100	93.058	ENSMLUG00000017764	INO80	100	92.745	Myotis_lucifugus
MGP_CAROLIEiJ_G0024144	Ino80	100	94.036	ENSNGAG00000019497	Ino80	100	94.225	Nannospalax_galili
MGP_CAROLIEiJ_G0024144	Ino80	91	67.976	ENSNBRG00000022086	ino80	99	67.032	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024144	Ino80	100	91.572	ENSNLEG00000003454	INO80	100	91.195	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024144	Ino80	91	76.489	ENSOPRG00000000831	INO80	91	76.489	Ochotona_princeps
MGP_CAROLIEiJ_G0024144	Ino80	100	93.145	ENSODEG00000016734	INO80	100	93.145	Octodon_degus
MGP_CAROLIEiJ_G0024144	Ino80	98	72.260	ENSONIG00000000772	ino80	99	71.040	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.648	ENSOCUG00000010763	INO80	100	93.648	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024144	Ino80	97	70.363	ENSORLG00000018028	ino80	98	69.955	Oryzias_latipes
MGP_CAROLIEiJ_G0024144	Ino80	96	70.986	ENSORLG00015012507	ino80	98	69.891	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024144	Ino80	96	70.978	ENSOMEG00000003791	ino80	96	70.232	Oryzias_melastigma
MGP_CAROLIEiJ_G0024144	Ino80	100	94.088	ENSOGAG00000008998	INO80	100	93.648	Otolemur_garnettii
MGP_CAROLIEiJ_G0024144	Ino80	100	92.481	ENSOARG00000020323	INO80	100	92.982	Ovis_aries
MGP_CAROLIEiJ_G0024144	Ino80	100	93.711	ENSPPAG00000042104	INO80	100	93.333	Pan_paniscus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.467	ENSPPRG00000011011	INO80	100	93.781	Panthera_pardus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.216	ENSPTIG00000005911	INO80	100	93.530	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSPTRG00000006939	INO80	100	93.396	Pan_troglodytes
MGP_CAROLIEiJ_G0024144	Ino80	100	93.774	ENSPANG00000019131	INO80	100	93.396	Papio_anubis
MGP_CAROLIEiJ_G0024144	Ino80	98	73.509	ENSPKIG00000021450	ino80	98	73.701	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024144	Ino80	100	86.738	ENSPSIG00000014403	INO80	100	87.052	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024144	Ino80	73	94.525	ENSPEMG00000013114	-	100	94.525	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024144	Ino80	100	91.069	ENSPCIG00000027848	INO80	100	90.818	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024144	Ino80	98	70.699	ENSPFOG00000013082	ino80	97	70.873	Poecilia_formosa
MGP_CAROLIEiJ_G0024144	Ino80	61	72.343	ENSPMEG00000021422	ino80	84	72.537	Poecilia_mexicana
MGP_CAROLIEiJ_G0024144	Ino80	91	72.237	ENSPREG00000013650	ino80	98	72.143	Poecilia_reticulata
MGP_CAROLIEiJ_G0024144	Ino80	99	91.293	ENSPPYG00000006368	INO80	99	90.852	Pongo_abelii
MGP_CAROLIEiJ_G0024144	Ino80	100	92.138	ENSPCOG00000022332	INO80	100	91.824	Propithecus_coquereli
MGP_CAROLIEiJ_G0024144	Ino80	100	91.132	ENSPVAG00000001852	INO80	100	90.755	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024144	Ino80	90	69.986	ENSPNYG00000002995	ino80	99	68.966	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024144	Ino80	100	73.142	ENSPNAG00000010386	ino80	100	73.188	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024144	Ino80	100	95.723	ENSRNOG00000014483	Ino80	100	95.723	Rattus_norvegicus
MGP_CAROLIEiJ_G0024144	Ino80	100	93.648	ENSRBIG00000031765	INO80	100	93.270	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024144	Ino80	100	93.711	ENSRROG00000033143	INO80	100	93.333	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024144	Ino80	98	94.340	ENSSBOG00000023493	INO80	100	94.340	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024144	Ino80	100	90.943	ENSSHAG00000016349	INO80	100	90.692	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024144	Ino80	98	74.872	ENSSFOG00015000183	ino80	99	74.615	Scleropages_formosus
MGP_CAROLIEiJ_G0024144	Ino80	97	71.835	ENSSMAG00000007221	ino80	99	70.364	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024144	Ino80	98	72.146	ENSSDUG00000009957	ino80	99	70.723	Seriola_dumerili
MGP_CAROLIEiJ_G0024144	Ino80	98	70.055	ENSSLDG00000000389	ino80	91	70.659	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024144	Ino80	100	89.824	ENSSARG00000007876	INO80	99	90.138	Sorex_araneus
MGP_CAROLIEiJ_G0024144	Ino80	91	70.568	ENSSPAG00000007779	ino80	98	70.233	Stegastes_partitus
MGP_CAROLIEiJ_G0024144	Ino80	100	92.924	ENSSSCG00000004753	INO80	100	93.049	Sus_scrofa
MGP_CAROLIEiJ_G0024144	Ino80	100	86.541	ENSTGUG00000010786	INO80	100	86.730	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024144	Ino80	91	72.384	ENSTRUG00000013026	ino80	98	71.908	Takifugu_rubripes
MGP_CAROLIEiJ_G0024144	Ino80	100	92.322	ENSTTRG00000011479	INO80	100	91.945	Tursiops_truncatus
MGP_CAROLIEiJ_G0024144	Ino80	74	91.901	ENSUMAG00000012190	-	99	91.986	Ursus_maritimus
MGP_CAROLIEiJ_G0024144	Ino80	100	87.673	ENSVPAG00000002838	INO80	100	87.358	Vicugna_pacos
MGP_CAROLIEiJ_G0024144	Ino80	100	93.463	ENSVVUG00000026698	INO80	100	93.463	Vulpes_vulpes
MGP_CAROLIEiJ_G0024144	Ino80	99	71.635	ENSXETG00000034272	INO80	99	71.132	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024144	Ino80	91	72.527	ENSXMAG00000006742	ino80	98	72.389	Xiphophorus_maculatus