EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024145 (Gene tree)
Gene ID: 110289334
Gene Symbol: Exd1
Alias: 4932702D22Rik|Exdl1
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 31746 bases
Position: chr2:112350918-112382663
Accession: 110289334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0053853	DNA_pol_A_exo1	PF01612.20	1.5e-08	1	1
MGP_CAROLIEiJ_P0053854	DNA_pol_A_exo1	PF01612.20	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0053853	-	6543	-	MGP_CAROLIEiJ_P0053853	570 (aa)	XP_021011151	UPI000A3181C3
MGP_CAROLIEiJ_T0053855	-	537	-	MGP_CAROLIEiJ_P0053855	98 (aa)	-	-
MGP_CAROLIEiJ_T0053854	-	5793	-	MGP_CAROLIEiJ_P0053854	570 (aa)	XP_021011151	UPI000A3181C3

Gene Model

Click here to download MGP_CAROLIEiJ_G0024145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024145	Exd1	99	73.997	ENSG00000178997	EXD1	98	79.630	Homo_sapiens
MGP_CAROLIEiJ_G0024145	Exd1	99	75.000	ENSAMEG00000016793	EXD1	99	75.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024145	Exd1	71	45.658	ENSAOCG00000009355	-	71	45.658	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024145	Exd1	59	48.368	ENSAPEG00000002194	-	86	48.368	Amphiprion_percula
MGP_CAROLIEiJ_G0024145	Exd1	69	58.987	ENSACAG00000003676	EXD1	100	58.987	Anolis_carolinensis
MGP_CAROLIEiJ_G0024145	Exd1	99	73.822	ENSANAG00000029058	EXD1	99	73.822	Aotus_nancymaae
MGP_CAROLIEiJ_G0024145	Exd1	70	42.928	ENSACLG00000001361	-	72	43.424	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024145	Exd1	68	43.333	ENSAMXG00000026016	-	74	43.333	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024145	Exd1	83	73.474	ENSBTAG00000008363	EXD1	99	73.474	Bos_taurus
MGP_CAROLIEiJ_G0024145	Exd1	99	69.459	ENSCJAG00000020765	EXD1	99	69.459	Callithrix_jacchus
MGP_CAROLIEiJ_G0024145	Exd1	99	72.125	ENSCAFG00000009510	EXD1	99	72.125	Canis_familiaris
MGP_CAROLIEiJ_G0024145	Exd1	74	70.353	ENSCAFG00020005504	EXD1	99	70.353	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024145	Exd1	99	70.775	ENSCHIG00000019606	EXD1	99	70.775	Capra_hircus
MGP_CAROLIEiJ_G0024145	Exd1	99	70.351	ENSCPOG00000010573	EXD1	99	70.351	Cavia_porcellus
MGP_CAROLIEiJ_G0024145	Exd1	99	71.030	ENSCCAG00000016905	EXD1	99	71.030	Cebus_capucinus
MGP_CAROLIEiJ_G0024145	Exd1	99	74.171	ENSCATG00000037400	EXD1	99	74.171	Cercocebus_atys
MGP_CAROLIEiJ_G0024145	Exd1	88	56.226	ENSCSAG00000007647	EXD1	99	56.226	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024145	Exd1	88	66.931	ENSCHOG00000011441	EXD1	99	66.931	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024145	Exd1	99	52.872	ENSCPBG00000013511	EXD1	93	53.041	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024145	Exd1	99	70.332	ENSCANG00000036848	EXD1	99	70.332	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024145	Exd1	100	86.364	ENSCGRG00001011355	Exd1	97	86.364	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024145	Exd1	100	86.364	ENSCGRG00000011633	Exd1	100	86.364	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024145	Exd1	67	43.702	ENSCSEG00000000904	-	68	43.702	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024145	Exd1	64	36.339	ENSDARG00000098669	exd1	88	42.066	Danio_rerio
MGP_CAROLIEiJ_G0024145	Exd1	99	74.042	ENSDNOG00000011410	EXD1	99	74.042	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024145	Exd1	91	72.460	ENSDORG00000012079	Exd1	99	72.460	Dipodomys_ordii
MGP_CAROLIEiJ_G0024145	Exd1	69	68.333	ENSETEG00000014257	-	78	68.333	Echinops_telfairi
MGP_CAROLIEiJ_G0024145	Exd1	99	72.743	ENSEASG00005016394	EXD1	99	72.743	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024145	Exd1	99	74.346	ENSECAG00000021250	EXD1	99	74.346	Equus_caballus
MGP_CAROLIEiJ_G0024145	Exd1	87	66.000	ENSEEUG00000001232	EXD1	99	66.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024145	Exd1	70	43.500	ENSELUG00000006324	-	66	43.500	Esox_lucius
MGP_CAROLIEiJ_G0024145	Exd1	99	75.482	ENSFCAG00000028533	EXD1	99	75.916	Felis_catus
MGP_CAROLIEiJ_G0024145	Exd1	57	46.130	ENSGMOG00000015956	-	96	45.342	Gadus_morhua
MGP_CAROLIEiJ_G0024145	Exd1	69	51.478	ENSGALG00000041449	EXD1	98	51.478	Gallus_gallus
MGP_CAROLIEiJ_G0024145	Exd1	70	42.317	ENSGAFG00000017161	-	72	42.569	Gambusia_affinis
MGP_CAROLIEiJ_G0024145	Exd1	99	51.864	ENSGAGG00000019200	EXD1	93	51.864	Gopherus_agassizii
MGP_CAROLIEiJ_G0024145	Exd1	99	73.997	ENSGGOG00000004594	EXD1	99	73.997	Gorilla_gorilla
MGP_CAROLIEiJ_G0024145	Exd1	99	71.804	ENSHGLG00000015369	EXD1	99	71.804	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024145	Exd1	99	70.928	ENSHGLG00100007398	EXD1	100	70.928	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024145	Exd1	99	78.284	ENSSTOG00000014980	EXD1	99	78.284	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024145	Exd1	78	42.257	ENSLBEG00000000022	-	69	44.527	Labrus_bergylta
MGP_CAROLIEiJ_G0024145	Exd1	75	50.346	ENSLACG00000006680	EXD1	72	50.346	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024145	Exd1	70	45.297	ENSLOCG00000012278	-	97	45.297	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024145	Exd1	92	70.169	ENSLAFG00000014739	EXD1	99	70.169	Loxodonta_africana
MGP_CAROLIEiJ_G0024145	Exd1	99	73.822	ENSMFAG00000034670	EXD1	99	73.822	Macaca_fascicularis
MGP_CAROLIEiJ_G0024145	Exd1	99	73.822	ENSMMUG00000013991	EXD1	99	73.822	Macaca_mulatta
MGP_CAROLIEiJ_G0024145	Exd1	99	73.997	ENSMNEG00000037333	EXD1	99	73.997	Macaca_nemestrina
MGP_CAROLIEiJ_G0024145	Exd1	62	79.830	ENSMLEG00000033153	EXD1	97	85.263	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024145	Exd1	70	43.424	ENSMZEG00005009193	-	75	43.921	Maylandia_zebra
MGP_CAROLIEiJ_G0024145	Exd1	67	51.020	ENSMGAG00000011179	EXD1	98	51.020	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024145	Exd1	100	84.939	ENSMAUG00000002698	Exd1	100	84.939	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024145	Exd1	99	76.307	ENSMICG00000014337	EXD1	99	76.307	Microcebus_murinus
MGP_CAROLIEiJ_G0024145	Exd1	100	81.786	ENSMOCG00000018151	Exd1	100	81.786	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024145	Exd1	90	64.190	ENSMODG00000000164	EXD1	99	64.190	Monodelphis_domestica
MGP_CAROLIEiJ_G0024145	Exd1	69	42.494	ENSMALG00000015814	-	87	41.975	Monopterus_albus
MGP_CAROLIEiJ_G0024145	Exd1	100	95.614	ENSMUSG00000048647	Exd1	100	95.614	Mus_musculus
MGP_CAROLIEiJ_G0024145	Exd1	100	88.772	MGP_PahariEiJ_G0025588	Exd1	100	88.772	Mus_pahari
MGP_CAROLIEiJ_G0024145	Exd1	100	95.789	MGP_SPRETEiJ_G0025061	Exd1	100	95.789	Mus_spretus
MGP_CAROLIEiJ_G0024145	Exd1	99	75.261	ENSMPUG00000008811	EXD1	99	75.261	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024145	Exd1	92	72.968	ENSMLUG00000001466	EXD1	99	72.968	Myotis_lucifugus
MGP_CAROLIEiJ_G0024145	Exd1	100	78.147	ENSNGAG00000002319	Exd1	100	78.147	Nannospalax_galili
MGP_CAROLIEiJ_G0024145	Exd1	99	70.486	ENSNLEG00000003456	EXD1	98	71.937	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024145	Exd1	88	61.731	ENSOPRG00000016433	EXD1	99	61.731	Ochotona_princeps
MGP_CAROLIEiJ_G0024145	Exd1	68	43.622	ENSONIG00000012043	-	98	44.388	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024145	Exd1	89	69.455	ENSOCUG00000013817	EXD1	99	69.455	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024145	Exd1	69	42.569	ENSORLG00000026344	-	74	42.569	Oryzias_latipes
MGP_CAROLIEiJ_G0024145	Exd1	70	42.506	ENSORLG00020005465	-	76	42.506	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024145	Exd1	70	42.752	ENSORLG00015004848	-	77	42.752	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024145	Exd1	67	44.730	ENSOMEG00000019812	-	77	43.980	Oryzias_melastigma
MGP_CAROLIEiJ_G0024145	Exd1	90	66.346	ENSOGAG00000013095	EXD1	99	66.538	Otolemur_garnettii
MGP_CAROLIEiJ_G0024145	Exd1	99	74.256	ENSOARG00000020330	EXD1	99	74.256	Ovis_aries
MGP_CAROLIEiJ_G0024145	Exd1	99	74.171	ENSPPAG00000033760	EXD1	99	74.171	Pan_paniscus
MGP_CAROLIEiJ_G0024145	Exd1	99	75.742	ENSPPRG00000011128	EXD1	99	75.742	Panthera_pardus
MGP_CAROLIEiJ_G0024145	Exd1	99	75.350	ENSPTIG00000020026	EXD1	99	75.784	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024145	Exd1	99	74.346	ENSPTRG00000006941	EXD1	99	74.346	Pan_troglodytes
MGP_CAROLIEiJ_G0024145	Exd1	99	73.997	ENSPANG00000019000	EXD1	99	73.997	Papio_anubis
MGP_CAROLIEiJ_G0024145	Exd1	69	42.211	ENSPKIG00000000671	-	71	42.211	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024145	Exd1	98	52.197	ENSPSIG00000014473	EXD1	92	52.373	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024145	Exd1	79	37.086	ENSPMGG00000015466	-	88	37.086	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024145	Exd1	85	65.182	ENSPCIG00000027845	EXD1	98	65.182	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024145	Exd1	70	41.481	ENSPFOG00000013673	-	97	41.481	Poecilia_formosa
MGP_CAROLIEiJ_G0024145	Exd1	77	40.625	ENSPLAG00000014262	-	81	40.625	Poecilia_latipinna
MGP_CAROLIEiJ_G0024145	Exd1	77	40.625	ENSPMEG00000012071	-	81	40.848	Poecilia_mexicana
MGP_CAROLIEiJ_G0024145	Exd1	77	41.518	ENSPREG00000019468	-	97	36.918	Poecilia_reticulata
MGP_CAROLIEiJ_G0024145	Exd1	88	73.123	ENSPPYG00000006369	EXD1	98	73.123	Pongo_abelii
MGP_CAROLIEiJ_G0024145	Exd1	68	61.795	ENSPCAG00000005269	-	75	61.795	Procavia_capensis
MGP_CAROLIEiJ_G0024145	Exd1	99	72.997	ENSPCOG00000026598	EXD1	99	74.806	Propithecus_coquereli
MGP_CAROLIEiJ_G0024145	Exd1	88	74.850	ENSPVAG00000003149	EXD1	98	74.850	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024145	Exd1	70	43.826	ENSPNAG00000008931	exd1	80	43.826	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024145	Exd1	100	87.368	ENSRNOG00000025360	Exd1	100	87.368	Rattus_norvegicus
MGP_CAROLIEiJ_G0024145	Exd1	62	84.659	ENSRBIG00000037257	EXD1	100	84.659	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024145	Exd1	99	73.822	ENSRROG00000034491	EXD1	99	73.822	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024145	Exd1	99	66.143	ENSSBOG00000024842	EXD1	99	66.143	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024145	Exd1	89	64.559	ENSSHAG00000016701	EXD1	97	64.559	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024145	Exd1	70	46.000	ENSSDUG00000004368	exd1	67	46.500	Seriola_dumerili
MGP_CAROLIEiJ_G0024145	Exd1	85	70.204	ENSSARG00000009556	-	98	69.583	Sorex_araneus
MGP_CAROLIEiJ_G0024145	Exd1	98	44.234	ENSSPUG00000001716	EXD1	91	44.234	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024145	Exd1	99	74.913	ENSSSCG00000004752	EXD1	99	74.913	Sus_scrofa
MGP_CAROLIEiJ_G0024145	Exd1	67	40.513	ENSTNIG00000017431	-	93	40.513	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024145	Exd1	74	59.574	ENSTBEG00000003085	EXD1	99	59.574	Tupaia_belangeri
MGP_CAROLIEiJ_G0024145	Exd1	87	73.307	ENSTTRG00000009809	EXD1	97	73.307	Tursiops_truncatus
MGP_CAROLIEiJ_G0024145	Exd1	99	75.610	ENSUMAG00000012170	EXD1	99	75.610	Ursus_maritimus
MGP_CAROLIEiJ_G0024145	Exd1	89	73.281	ENSVPAG00000007758	EXD1	99	73.281	Vicugna_pacos
MGP_CAROLIEiJ_G0024145	Exd1	99	72.125	ENSVVUG00000026704	EXD1	99	72.125	Vulpes_vulpes
MGP_CAROLIEiJ_G0024145	Exd1	68	47.250	ENSXETG00000017895	exd1	95	47.250	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024145	Exd1	58	41.818	ENSXCOG00000010879	-	84	41.818	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024145	Exd1	62	42.655	ENSXMAG00000014462	-	86	41.742	Xiphophorus_maculatus