EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024205 (Gene tree)
Gene ID: 110310673
Gene Symbol: Patl2
Alias: 4930424G05Rik|Pat1a
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 68436 bases
Position: chr2:114964291-115032726
Accession: 110310673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0054228	PAT1	PF09770.9	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0054228	-	2437	XM_021183793	MGP_CAROLIEiJ_P0054228	532 (aa)	XP_021039452	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024205	Patl2	100	67.993	ENSG00000229474	PATL2	96	80.000	Homo_sapiens
MGP_CAROLIEiJ_G0024205	Patl2	78	43.560	ENSAPOG00000022988	patl2	60	43.326	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024205	Patl2	89	72.485	ENSAMEG00000014997	PATL2	93	71.743	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024205	Patl2	78	43.560	ENSAOCG00000023738	patl2	53	43.326	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024205	Patl2	78	43.468	ENSAPEG00000011299	patl2	64	43.128	Amphiprion_percula
MGP_CAROLIEiJ_G0024205	Patl2	78	42.143	ENSATEG00000019567	patl2	63	41.805	Anabas_testudineus
MGP_CAROLIEiJ_G0024205	Patl2	89	46.731	ENSAPLG00000003980	PATL2	83	46.538	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024205	Patl2	51	37.586	ENSAPLG00000013394	PATL1	59	37.716	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024205	Patl2	62	51.039	ENSACAG00000006951	-	97	49.451	Anolis_carolinensis
MGP_CAROLIEiJ_G0024205	Patl2	100	67.572	ENSANAG00000022701	PATL2	97	67.572	Aotus_nancymaae
MGP_CAROLIEiJ_G0024205	Patl2	81	42.605	ENSACLG00000010326	patl2	59	42.605	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024205	Patl2	78	45.131	ENSAMXG00000020293	patl2	60	42.857	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024205	Patl2	64	76.765	ENSBTAG00000001558	PATL2	95	76.765	Bos_taurus
MGP_CAROLIEiJ_G0024205	Patl2	100	67.210	ENSCJAG00000002379	PATL2	97	67.210	Callithrix_jacchus
MGP_CAROLIEiJ_G0024205	Patl2	98	68.566	ENSCAFG00000013629	PATL2	97	68.382	Canis_familiaris
MGP_CAROLIEiJ_G0024205	Patl2	98	68.704	ENSCAFG00020022169	PATL2	96	68.519	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024205	Patl2	99	66.098	ENSCHIG00000026665	PATL2	96	66.098	Capra_hircus
MGP_CAROLIEiJ_G0024205	Patl2	100	65.880	ENSTSYG00000032456	PATL2	97	66.062	Carlito_syrichta
MGP_CAROLIEiJ_G0024205	Patl2	98	66.290	ENSCPOG00000002922	PATL2	100	66.290	Cavia_porcellus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.248	ENSCCAG00000025261	PATL2	98	68.796	Cebus_capucinus
MGP_CAROLIEiJ_G0024205	Patl2	100	67.935	ENSCATG00000034794	PATL2	96	80.294	Cercocebus_atys
MGP_CAROLIEiJ_G0024205	Patl2	98	68.260	ENSCLAG00000014407	PATL2	99	68.260	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024205	Patl2	65	37.535	ENSCSAG00000006095	PATL1	51	37.535	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024205	Patl2	98	67.956	ENSCSAG00000009601	PATL2	97	68.877	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024205	Patl2	65	37.255	ENSCHOG00000001611	PATL1	57	37.255	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024205	Patl2	83	51.794	ENSCPBG00000006150	PATL2	62	53.521	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024205	Patl2	53	31.208	ENSCSAVG00000002430	-	77	31.208	Ciona_savignyi
MGP_CAROLIEiJ_G0024205	Patl2	100	68.364	ENSCANG00000013856	PATL2	97	69.273	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024205	Patl2	98	78.626	ENSCGRG00001010801	Patl2	100	78.626	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024205	Patl2	98	78.626	ENSCGRG00000013007	Patl2	100	78.626	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024205	Patl2	93	39.057	ENSCSEG00000009438	patl2	59	43.124	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024205	Patl2	78	38.173	ENSCVAG00000016203	patl2	62	37.617	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024205	Patl2	80	44.138	ENSDARG00000089567	patl2	59	43.678	Danio_rerio
MGP_CAROLIEiJ_G0024205	Patl2	100	66.964	ENSDNOG00000036837	PATL2	92	67.500	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024205	Patl2	73	36.409	ENSDNOG00000038865	PATL1	64	37.255	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024205	Patl2	97	65.957	ENSDORG00000026649	Patl2	99	65.764	Dipodomys_ordii
MGP_CAROLIEiJ_G0024205	Patl2	64	72.941	ENSETEG00000005068	PATL2	96	74.118	Echinops_telfairi
MGP_CAROLIEiJ_G0024205	Patl2	99	66.484	ENSEASG00005017984	PATL2	97	66.117	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024205	Patl2	99	68.440	ENSECAG00000013462	PATL2	97	69.541	Equus_caballus
MGP_CAROLIEiJ_G0024205	Patl2	77	46.172	ENSELUG00000023244	patl2	56	45.215	Esox_lucius
MGP_CAROLIEiJ_G0024205	Patl2	100	68.750	ENSFCAG00000027170	PATL2	97	68.382	Felis_catus
MGP_CAROLIEiJ_G0024205	Patl2	81	51.474	ENSFALG00000009768	PATL2	58	53.302	Ficedula_albicollis
MGP_CAROLIEiJ_G0024205	Patl2	98	66.221	ENSFDAG00000012242	PATL2	100	65.341	Fukomys_damarensis
MGP_CAROLIEiJ_G0024205	Patl2	58	41.346	ENSFHEG00000009727	patl2	59	40.984	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024205	Patl2	77	41.725	ENSGMOG00000005666	patl2	98	40.855	Gadus_morhua
MGP_CAROLIEiJ_G0024205	Patl2	79	52.267	ENSGALG00000002167	PATL2	52	52.267	Gallus_gallus
MGP_CAROLIEiJ_G0024205	Patl2	78	44.084	ENSGAFG00000019344	patl2	58	43.750	Gambusia_affinis
MGP_CAROLIEiJ_G0024205	Patl2	73	36.973	ENSGAGG00000004461	PATL1	51	37.430	Gopherus_agassizii
MGP_CAROLIEiJ_G0024205	Patl2	100	67.572	ENSGGOG00000025923	PATL2	97	68.478	Gorilla_gorilla
MGP_CAROLIEiJ_G0024205	Patl2	81	43.207	ENSHBUG00000005929	patl2	67	42.984	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024205	Patl2	98	65.725	ENSHGLG00000017415	-	100	65.913	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024205	Patl2	98	66.290	ENSHGLG00100008419	-	100	66.478	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024205	Patl2	78	42.923	ENSHCOG00000016754	patl2	57	42.923	Hippocampus_comes
MGP_CAROLIEiJ_G0024205	Patl2	80	42.857	ENSIPUG00000020692	patl2	60	41.743	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.592	ENSSTOG00000033848	PATL2	97	68.592	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024205	Patl2	82	41.126	ENSKMAG00000021275	patl2	60	40.909	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024205	Patl2	81	41.758	ENSLBEG00000022344	patl2	58	41.538	Labrus_bergylta
MGP_CAROLIEiJ_G0024205	Patl2	86	40.365	ENSLACG00000005291	-	61	41.152	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024205	Patl2	98	66.856	ENSLAFG00000031124	PATL2	98	67.614	Loxodonta_africana
MGP_CAROLIEiJ_G0024205	Patl2	100	68.058	ENSMFAG00000003565	PATL2	97	69.388	Macaca_fascicularis
MGP_CAROLIEiJ_G0024205	Patl2	64	80.000	ENSMMUG00000014294	PATL2	96	80.000	Macaca_mulatta
MGP_CAROLIEiJ_G0024205	Patl2	100	68.116	ENSMNEG00000034510	PATL2	97	69.259	Macaca_nemestrina
MGP_CAROLIEiJ_G0024205	Patl2	100	68.297	ENSMLEG00000042248	PATL2	97	68.297	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024205	Patl2	78	42.243	ENSMAMG00000013327	patl2	63	41.429	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024205	Patl2	81	42.605	ENSMZEG00005014292	patl2	59	42.605	Maylandia_zebra
MGP_CAROLIEiJ_G0024205	Patl2	79	51.074	ENSMGAG00000001309	PATL2	67	51.790	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024205	Patl2	100	77.903	ENSMAUG00000001008	Patl2	98	78.464	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024205	Patl2	64	79.118	ENSMICG00000005037	PATL2	96	79.118	Microcebus_murinus
MGP_CAROLIEiJ_G0024205	Patl2	100	79.737	ENSMOCG00000015367	Patl2	100	79.550	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024205	Patl2	80	34.694	ENSMMOG00000013711	patl1	50	37.069	Mola_mola
MGP_CAROLIEiJ_G0024205	Patl2	78	38.425	ENSMMOG00000001299	patl2	61	38.663	Mola_mola
MGP_CAROLIEiJ_G0024205	Patl2	89	65.102	ENSMODG00000017690	PATL2	87	64.000	Monodelphis_domestica
MGP_CAROLIEiJ_G0024205	Patl2	65	38.611	ENSMALG00000018706	patl1	51	38.611	Monopterus_albus
MGP_CAROLIEiJ_G0024205	Patl2	79	43.357	ENSMALG00000008131	patl2	54	43.056	Monopterus_albus
MGP_CAROLIEiJ_G0024205	Patl2	98	96.743	ENSMUSG00000027233	Patl2	98	96.743	Mus_musculus
MGP_CAROLIEiJ_G0024205	Patl2	100	95.113	MGP_PahariEiJ_G0025648	Patl2	100	94.925	Mus_pahari
MGP_CAROLIEiJ_G0024205	Patl2	100	97.556	MGP_SPRETEiJ_G0025122	Patl2	100	97.556	Mus_spretus
MGP_CAROLIEiJ_G0024205	Patl2	97	65.631	ENSNGAG00000020368	Patl2	99	64.717	Nannospalax_galili
MGP_CAROLIEiJ_G0024205	Patl2	81	42.762	ENSNBRG00000011745	patl2	63	42.539	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024205	Patl2	100	68.431	ENSNLEG00000005673	PATL2	97	69.216	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024205	Patl2	65	37.535	ENSOPRG00000007963	PATL1	54	37.535	Ochotona_princeps
MGP_CAROLIEiJ_G0024205	Patl2	81	42.511	ENSONIG00000011519	patl2	59	42.511	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024205	Patl2	65	37.709	ENSOANG00000011117	-	87	37.709	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024205	Patl2	84	58.407	ENSOANG00000001538	-	100	57.965	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024205	Patl2	98	68.631	ENSOCUG00000006339	PATL2	99	68.620	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024205	Patl2	78	42.227	ENSORLG00000005780	patl2	56	42.032	Oryzias_latipes
MGP_CAROLIEiJ_G0024205	Patl2	81	41.758	ENSORLG00020016506	patl2	58	41.575	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024205	Patl2	78	42.227	ENSORLG00015014500	patl2	56	42.032	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024205	Patl2	74	42.402	ENSOMEG00000021628	patl2	60	41.704	Oryzias_melastigma
MGP_CAROLIEiJ_G0024205	Patl2	99	67.343	ENSOGAG00000004709	PATL2	97	66.974	Otolemur_garnettii
MGP_CAROLIEiJ_G0024205	Patl2	98	65.607	ENSOARG00000003762	PATL2	98	65.607	Ovis_aries
MGP_CAROLIEiJ_G0024205	Patl2	100	67.568	ENSPPAG00000007221	PATL2	97	67.748	Pan_paniscus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.440	ENSPPRG00000004279	PATL2	97	68.073	Panthera_pardus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.566	ENSPTIG00000018964	PATL2	97	68.199	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024205	Patl2	100	67.748	ENSPTRG00000041536	PATL2	97	67.928	Pan_troglodytes
MGP_CAROLIEiJ_G0024205	Patl2	100	67.877	ENSPANG00000018026	PATL2	97	69.202	Papio_anubis
MGP_CAROLIEiJ_G0024205	Patl2	74	43.659	ENSPKIG00000016887	patl2	60	41.342	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024205	Patl2	89	45.657	ENSPSIG00000017690	PATL2	98	49.015	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024205	Patl2	82	39.955	ENSPMGG00000014550	patl2	68	39.286	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024205	Patl2	98	80.806	ENSPEMG00000016509	Patl2	98	80.806	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024205	Patl2	89	63.103	ENSPCIG00000018256	PATL2	92	61.134	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024205	Patl2	78	44.084	ENSPFOG00000007305	patl2	57	43.852	Poecilia_formosa
MGP_CAROLIEiJ_G0024205	Patl2	78	44.084	ENSPLAG00000020713	patl2	57	43.852	Poecilia_latipinna
MGP_CAROLIEiJ_G0024205	Patl2	78	44.084	ENSPMEG00000018942	patl2	57	43.852	Poecilia_mexicana
MGP_CAROLIEiJ_G0024205	Patl2	65	42.659	ENSPREG00000023066	patl2	55	42.541	Poecilia_reticulata
MGP_CAROLIEiJ_G0024205	Patl2	100	68.401	ENSPCOG00000000295	PATL2	96	79.412	Propithecus_coquereli
MGP_CAROLIEiJ_G0024205	Patl2	81	42.984	ENSPNYG00000017381	patl2	67	42.762	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024205	Patl2	78	44.208	ENSPNAG00000002315	patl2	59	42.824	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024205	Patl2	98	88.868	ENSRNOG00000017061	Patl2	98	88.868	Rattus_norvegicus
MGP_CAROLIEiJ_G0024205	Patl2	100	67.572	ENSRBIG00000040369	PATL2	97	68.478	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024205	Patl2	100	67.754	ENSRROG00000028786	PATL2	97	68.659	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024205	Patl2	100	67.029	ENSSBOG00000034766	PATL2	98	67.029	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024205	Patl2	78	44.419	ENSSFOG00015000720	patl2	57	44.316	Scleropages_formosus
MGP_CAROLIEiJ_G0024205	Patl2	82	41.758	ENSSMAG00000017262	patl2	70	40.625	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024205	Patl2	81	41.501	ENSSDUG00000022927	patl2	59	41.280	Seriola_dumerili
MGP_CAROLIEiJ_G0024205	Patl2	78	41.686	ENSSLDG00000017922	patl2	53	44.886	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024205	Patl2	92	65.455	ENSSARG00000009047	PATL2	97	65.979	Sorex_araneus
MGP_CAROLIEiJ_G0024205	Patl2	64	55.362	ENSSPUG00000019065	PATL2	97	55.362	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024205	Patl2	78	40.845	ENSSPAG00000004784	patl2	62	40.749	Stegastes_partitus
MGP_CAROLIEiJ_G0024205	Patl2	73	36.409	ENSSSCG00000013124	PATL1	53	36.975	Sus_scrofa
MGP_CAROLIEiJ_G0024205	Patl2	72	53.213	ENSTGUG00000004619	-	98	53.213	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024205	Patl2	77	43.602	ENSTRUG00000005647	patl2	58	43.128	Takifugu_rubripes
MGP_CAROLIEiJ_G0024205	Patl2	65	37.535	ENSTTRG00000009389	PATL1	54	37.535	Tursiops_truncatus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.223	ENSUAMG00000018533	PATL2	97	67.864	Ursus_americanus
MGP_CAROLIEiJ_G0024205	Patl2	73	36.160	ENSUMAG00000018634	PATL1	52	37.151	Ursus_maritimus
MGP_CAROLIEiJ_G0024205	Patl2	100	68.223	ENSUMAG00000007738	PATL2	97	67.864	Ursus_maritimus
MGP_CAROLIEiJ_G0024205	Patl2	96	68.668	ENSVVUG00000011576	PATL2	96	68.293	Vulpes_vulpes
MGP_CAROLIEiJ_G0024205	Patl2	73	36.658	ENSVVUG00000016668	PATL1	51	37.255	Vulpes_vulpes
MGP_CAROLIEiJ_G0024205	Patl2	74	44.717	ENSXETG00000014167	patl2	68	43.590	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024205	Patl2	73	36.186	ENSXCOG00000010808	patl1	66	37.598	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024205	Patl2	78	44.316	ENSXMAG00000018464	patl2	56	44.084	Xiphophorus_maculatus