EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024344 (Gene tree)
Gene ID: 110284789
Gene Symbol: Trmt6
Alias: 3300001M20Rik
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 12044 bases
Position: chr2:125588822-125600865
Accession: 110284789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0054817	Gcd10p	PF04189.13	1.6e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0054820	-	622	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054815	-	4131	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054816	-	2934	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054817	-	2814	XM_021150692	MGP_CAROLIEiJ_P0054817	497 (aa)	XP_021006351	UPI000A31AC60
MGP_CAROLIEiJ_T0054818	-	460	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054819	-	641	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.538	ENSG00000089195	TRMT6	100	84.538	Homo_sapiens
MGP_CAROLIEiJ_G0024344	Trmt6	96	57.588	ENSAPOG00000008036	trmt6	98	57.796	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024344	Trmt6	100	85.141	ENSAMEG00000010635	TRMT6	100	85.141	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024344	Trmt6	95	55.720	ENSACIG00000004608	trmt6	97	55.252	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.933	ENSAOCG00000024322	trmt6	98	56.576	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024344	Trmt6	96	58.246	ENSAPEG00000017334	trmt6	98	57.884	Amphiprion_percula
MGP_CAROLIEiJ_G0024344	Trmt6	91	57.987	ENSATEG00000018498	trmt6	97	59.081	Anabas_testudineus
MGP_CAROLIEiJ_G0024344	Trmt6	92	72.767	ENSAPLG00000007761	TRMT6	99	72.767	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024344	Trmt6	96	66.597	ENSACAG00000000575	TRMT6	98	66.597	Anolis_carolinensis
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.538	ENSANAG00000021260	TRMT6	100	84.538	Aotus_nancymaae
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.513	ENSACLG00000026034	trmt6	95	56.513	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024344	Trmt6	96	57.113	ENSAMXG00000017116	trmt6	96	58.750	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.455	ENSBTAG00000001314	TRMT6	99	85.455	Bos_taurus
MGP_CAROLIEiJ_G0024344	Trmt6	100	83.936	ENSCJAG00000021296	TRMT6	100	83.936	Callithrix_jacchus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSCAFG00000005969	TRMT6	100	84.337	Canis_familiaris
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSCAFG00020000777	TRMT6	100	84.337	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.051	ENSCHIG00000010338	TRMT6	99	85.051	Capra_hircus
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.020	ENSTSYG00000004286	TRMT6	99	85.020	Carlito_syrichta
MGP_CAROLIEiJ_G0024344	Trmt6	83	85.472	ENSCAPG00000015467	TRMT6	93	85.472	Cavia_aperea
MGP_CAROLIEiJ_G0024344	Trmt6	99	84.008	ENSCPOG00000013809	TRMT6	99	84.008	Cavia_porcellus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSCCAG00000026939	TRMT6	100	84.337	Cebus_capucinus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.137	ENSCATG00000041111	TRMT6	100	84.137	Cercocebus_atys
MGP_CAROLIEiJ_G0024344	Trmt6	100	85.141	ENSCLAG00000013978	TRMT6	100	85.141	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.137	ENSCSAG00000013461	TRMT6	100	84.137	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024344	Trmt6	83	74.114	ENSCHOG00000012537	TRMT6	74	74.114	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024344	Trmt6	95	73.013	ENSCPBG00000023406	TRMT6	97	72.803	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024344	Trmt6	90	34.914	ENSCING00000002472	-	96	34.298	Ciona_intestinalis
MGP_CAROLIEiJ_G0024344	Trmt6	87	39.503	ENSCSAVG00000001680	-	94	38.837	Ciona_savignyi
MGP_CAROLIEiJ_G0024344	Trmt6	100	83.936	ENSCANG00000002381	TRMT6	100	83.936	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024344	Trmt6	100	90.946	ENSCGRG00001003385	Trmt6	100	90.946	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024344	Trmt6	100	90.946	ENSCGRG00000006540	Trmt6	100	90.946	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024344	Trmt6	96	58.873	ENSCSEG00000002228	trmt6	97	58.873	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.612	ENSCVAG00000000341	trmt6	98	56.612	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024344	Trmt6	97	57.971	ENSDARG00000042344	trmt6	97	57.971	Danio_rerio
MGP_CAROLIEiJ_G0024344	Trmt6	100	78.304	ENSDNOG00000012785	TRMT6	100	78.304	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024344	Trmt6	98	85.890	ENSDORG00000006458	Trmt6	99	85.890	Dipodomys_ordii
MGP_CAROLIEiJ_G0024344	Trmt6	60	91.667	ENSETEG00000003490	-	60	91.667	Echinops_telfairi
MGP_CAROLIEiJ_G0024344	Trmt6	65	48.615	ENSETEG00000017282	-	95	48.615	Echinops_telfairi
MGP_CAROLIEiJ_G0024344	Trmt6	97	86.071	ENSEASG00005001411	TRMT6	99	85.366	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024344	Trmt6	97	85.447	ENSECAG00000023914	TRMT6	99	84.413	Equus_caballus
MGP_CAROLIEiJ_G0024344	Trmt6	99	82.828	ENSEEUG00000006635	TRMT6	99	82.828	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024344	Trmt6	95	57.764	ENSELUG00000013378	trmt6	78	59.560	Esox_lucius
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.598	ENSFCAG00000003102	TRMT6	99	85.598	Felis_catus
MGP_CAROLIEiJ_G0024344	Trmt6	90	73.009	ENSFALG00000013575	TRMT6	97	72.566	Ficedula_albicollis
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.859	ENSFDAG00000015117	TRMT6	99	85.859	Fukomys_damarensis
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.485	ENSFHEG00000019957	trmt6	97	56.485	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024344	Trmt6	71	68.627	ENSGMOG00000011059	trmt6	97	63.780	Gadus_morhua
MGP_CAROLIEiJ_G0024344	Trmt6	95	70.860	ENSGALG00000009169	TRMT6	97	70.860	Gallus_gallus
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.133	ENSGAFG00000008618	trmt6	97	56.133	Gambusia_affinis
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.695	ENSGACG00000012471	trmt6	96	57.620	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024344	Trmt6	95	72.803	ENSGAGG00000008464	TRMT6	98	72.967	Gopherus_agassizii
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSGGOG00000008597	TRMT6	100	84.739	Gorilla_gorilla
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.513	ENSHBUG00000016631	trmt6	96	56.513	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.253	ENSHGLG00000015405	TRMT6	99	85.253	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.253	ENSHGLG00100004120	TRMT6	99	85.253	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024344	Trmt6	96	57.230	ENSHCOG00000000118	trmt6	97	57.230	Hippocampus_comes
MGP_CAROLIEiJ_G0024344	Trmt6	95	59.705	ENSIPUG00000019365	trmt6	97	59.916	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024344	Trmt6	100	85.111	ENSSTOG00000006863	TRMT6	100	85.111	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024344	Trmt6	99	84.211	ENSJJAG00000007315	Trmt6	99	84.211	Jaculus_jaculus
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.303	ENSKMAG00000001295	trmt6	97	57.442	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024344	Trmt6	96	57.023	ENSLBEG00000025654	trmt6	97	57.231	Labrus_bergylta
MGP_CAROLIEiJ_G0024344	Trmt6	96	66.527	ENSLACG00000016478	TRMT6	96	66.527	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024344	Trmt6	96	62.994	ENSLOCG00000016451	trmt6	97	62.994	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024344	Trmt6	99	83.300	ENSLAFG00000032216	TRMT6	99	83.300	Loxodonta_africana
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSMFAG00000044360	TRMT6	100	84.337	Macaca_fascicularis
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSMMUG00000013728	TRMT6	100	84.337	Macaca_mulatta
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.137	ENSMNEG00000041831	TRMT6	100	84.137	Macaca_nemestrina
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSMLEG00000040762	TRMT6	100	84.337	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.275	ENSMAMG00000012101	trmt6	98	58.678	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.513	ENSMZEG00005010771	trmt6	95	56.513	Maylandia_zebra
MGP_CAROLIEiJ_G0024344	Trmt6	95	70.860	ENSMGAG00000007678	TRMT6	96	70.860	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024344	Trmt6	100	91.147	ENSMAUG00000008719	Trmt6	100	91.147	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024344	Trmt6	96	86.042	ENSMICG00000011626	TRMT6	99	84.818	Microcebus_murinus
MGP_CAROLIEiJ_G0024344	Trmt6	100	91.348	ENSMOCG00000022320	Trmt6	100	91.348	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.184	ENSMMOG00000004412	trmt6	97	56.184	Mola_mola
MGP_CAROLIEiJ_G0024344	Trmt6	97	76.507	ENSMODG00000003784	TRMT6	97	76.507	Monodelphis_domestica
MGP_CAROLIEiJ_G0024344	Trmt6	96	53.862	ENSMALG00000018140	trmt6	96	53.862	Monopterus_albus
MGP_CAROLIEiJ_G0024344	Trmt6	100	97.586	ENSMUSG00000037376	Trmt6	100	97.586	Mus_musculus
MGP_CAROLIEiJ_G0024344	Trmt6	100	96.177	MGP_PahariEiJ_G0025789	Trmt6	100	96.177	Mus_pahari
MGP_CAROLIEiJ_G0024344	Trmt6	100	96.982	MGP_SPRETEiJ_G0025264	Trmt6	100	96.982	Mus_spretus
MGP_CAROLIEiJ_G0024344	Trmt6	87	85.977	ENSMPUG00000006317	TRMT6	93	85.977	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024344	Trmt6	97	85.031	ENSMLUG00000006491	TRMT6	100	83.735	Myotis_lucifugus
MGP_CAROLIEiJ_G0024344	Trmt6	100	85.371	ENSNGAG00000015251	Trmt6	100	85.371	Nannospalax_galili
MGP_CAROLIEiJ_G0024344	Trmt6	95	53.586	ENSNBRG00000020261	trmt6	96	53.586	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSNLEG00000013957	TRMT6	100	84.337	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024344	Trmt6	84	77.566	ENSMEUG00000009179	TRMT6	99	77.566	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024344	Trmt6	96	83.576	ENSOPRG00000008564	TRMT6	98	83.576	Ochotona_princeps
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSODEG00000005657	TRMT6	100	84.739	Octodon_degus
MGP_CAROLIEiJ_G0024344	Trmt6	95	57.143	ENSONIG00000000968	trmt6	96	57.143	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024344	Trmt6	91	76.264	ENSOANG00000008403	-	99	76.264	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024344	Trmt6	99	84.413	ENSOCUG00000014669	TRMT6	99	84.413	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024344	Trmt6	95	55.324	ENSORLG00000009862	trmt6	97	53.027	Oryzias_latipes
MGP_CAROLIEiJ_G0024344	Trmt6	95	55.115	ENSORLG00020001466	trmt6	97	52.818	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024344	Trmt6	95	55.115	ENSORLG00015015552	trmt6	97	53.027	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024344	Trmt6	96	54.149	ENSOMEG00000019874	trmt6	97	54.564	Oryzias_melastigma
MGP_CAROLIEiJ_G0024344	Trmt6	97	84.647	ENSOGAG00000012950	TRMT6	98	83.570	Otolemur_garnettii
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.657	ENSOARG00000017993	TRMT6	99	85.657	Ovis_aries
MGP_CAROLIEiJ_G0024344	Trmt6	100	83.968	ENSPPAG00000036809	TRMT6	100	83.968	Pan_paniscus
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.801	ENSPPRG00000000424	TRMT6	99	85.801	Panthera_pardus
MGP_CAROLIEiJ_G0024344	Trmt6	99	85.801	ENSPTIG00000010629	TRMT6	99	85.801	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.538	ENSPTRG00000013231	TRMT6	100	84.538	Pan_troglodytes
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSPANG00000009284	TRMT6	100	84.337	Papio_anubis
MGP_CAROLIEiJ_G0024344	Trmt6	96	60.251	ENSPKIG00000003441	trmt6	97	58.577	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024344	Trmt6	98	70.825	ENSPSIG00000017048	TRMT6	99	70.825	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024344	Trmt6	91	58.079	ENSPMGG00000021074	trmt6	96	58.079	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024344	Trmt6	97	92.100	ENSPEMG00000023268	Trmt6	100	90.763	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024344	Trmt6	99	75.911	ENSPCIG00000001546	TRMT6	96	75.911	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.405	ENSPFOG00000003037	trmt6	97	56.405	Poecilia_formosa
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.576	ENSPLAG00000005143	trmt6	97	56.576	Poecilia_latipinna
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.576	ENSPMEG00000014875	trmt6	97	56.576	Poecilia_mexicana
MGP_CAROLIEiJ_G0024344	Trmt6	96	52.521	ENSPREG00000016227	trmt6	96	54.202	Poecilia_reticulata
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSPPYG00000010691	TRMT6	100	84.739	Pongo_abelii
MGP_CAROLIEiJ_G0024344	Trmt6	99	82.688	ENSPCAG00000012098	TRMT6	99	82.688	Procavia_capensis
MGP_CAROLIEiJ_G0024344	Trmt6	97	85.892	ENSPCOG00000020723	TRMT6	99	84.848	Propithecus_coquereli
MGP_CAROLIEiJ_G0024344	Trmt6	99	81.048	ENSPVAG00000007539	TRMT6	99	81.048	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024344	Trmt6	95	55.814	ENSPNYG00000000918	trmt6	97	55.814	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024344	Trmt6	96	59.252	ENSPNAG00000019279	trmt6	96	59.252	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024344	Trmt6	100	92.958	ENSRNOG00000021270	Trmt6	100	92.958	Rattus_norvegicus
MGP_CAROLIEiJ_G0024344	Trmt6	100	83.133	ENSRBIG00000031132	TRMT6	100	83.133	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSRROG00000045329	TRMT6	100	84.337	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024344	Trmt6	85	83.914	ENSSBOG00000019803	-	99	83.914	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.337	ENSSBOG00000033602	-	100	84.337	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024344	Trmt6	99	75.506	ENSSHAG00000010754	TRMT6	96	75.506	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024344	Trmt6	96	64.033	ENSSFOG00015008429	trmt6	97	64.033	Scleropages_formosus
MGP_CAROLIEiJ_G0024344	Trmt6	96	57.884	ENSSMAG00000005352	trmt6	97	58.299	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024344	Trmt6	96	58.038	ENSSDUG00000008294	trmt6	97	58.750	Seriola_dumerili
MGP_CAROLIEiJ_G0024344	Trmt6	96	58.873	ENSSLDG00000002180	trmt6	97	59.583	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024344	Trmt6	97	79.834	ENSSARG00000005487	TRMT6	100	78.715	Sorex_araneus
MGP_CAROLIEiJ_G0024344	Trmt6	96	59.167	ENSSPAG00000011628	trmt6	97	59.375	Stegastes_partitus
MGP_CAROLIEiJ_G0024344	Trmt6	99	84.476	ENSSSCG00000007046	TRMT6	71	84.476	Sus_scrofa
MGP_CAROLIEiJ_G0024344	Trmt6	95	72.211	ENSTGUG00000002195	TRMT6	97	73.053	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024344	Trmt6	95	54.737	ENSTRUG00000007153	trmt6	97	54.526	Takifugu_rubripes
MGP_CAROLIEiJ_G0024344	Trmt6	95	56.818	ENSTNIG00000010726	TRMT6	96	56.818	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024344	Trmt6	76	87.742	ENSTBEG00000016317	TRMT6	76	87.742	Tupaia_belangeri
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSTTRG00000012889	TRMT6	100	84.739	Tursiops_truncatus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSUAMG00000008674	TRMT6	100	84.739	Ursus_americanus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.739	ENSUMAG00000004999	TRMT6	100	84.739	Ursus_maritimus
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.095	ENSVPAG00000002371	TRMT6	100	84.095	Vicugna_pacos
MGP_CAROLIEiJ_G0024344	Trmt6	100	84.538	ENSVVUG00000023370	TRMT6	100	84.538	Vulpes_vulpes
MGP_CAROLIEiJ_G0024344	Trmt6	96	64.682	ENSXETG00000004501	trmt6	98	64.634	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024344	Trmt6	96	51.891	ENSXCOG00000007761	trmt6	97	52.731	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024344	Trmt6	96	56.875	ENSXMAG00000008592	trmt6	97	56.875	Xiphophorus_maculatus