EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024365 (Gene tree)
Gene ID: 110283883
Gene Symbol: Esf1
Alias: 2610101J03Rik
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 52098 bases
Position: chr2:132534058-132586155
Accession: 110283883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0054901	NUC153	PF08159.12	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0054902	-	650	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054903	-	614	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054901	-	3375	XM_021149435	MGP_CAROLIEiJ_P0054901	842 (aa)	XP_021005094	UPI000A3176A3
MGP_CAROLIEiJ_T0054904	-	528	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024365	Esf1	100	79.859	ENSG00000089048	ESF1	99	84.989	Homo_sapiens
MGP_CAROLIEiJ_G0024365	Esf1	59	54.476	ENSAPOG00000003004	esf1	99	54.972	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.544	ENSAMEG00000008830	ESF1	100	77.544	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024365	Esf1	76	70.667	ENSACIG00000018305	esf1	90	70.833	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024365	Esf1	75	74.026	ENSAOCG00000006033	esf1	88	73.611	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024365	Esf1	75	74.026	ENSAPEG00000022385	esf1	88	73.611	Amphiprion_percula
MGP_CAROLIEiJ_G0024365	Esf1	77	72.973	ENSATEG00000016321	esf1	85	73.611	Anabas_testudineus
MGP_CAROLIEiJ_G0024365	Esf1	100	61.170	ENSAPLG00000012113	ESF1	100	60.727	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024365	Esf1	100	61.833	ENSACAG00000000963	ESF1	66	74.552	Anolis_carolinensis
MGP_CAROLIEiJ_G0024365	Esf1	100	79.083	ENSANAG00000036778	ESF1	100	78.621	Aotus_nancymaae
MGP_CAROLIEiJ_G0024365	Esf1	76	70.130	ENSACLG00000002972	esf1	88	69.444	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024365	Esf1	75	64.261	ENSAMXG00000001172	esf1	99	64.737	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.674	ENSBTAG00000007130	ESF1	100	77.442	Bos_taurus
MGP_CAROLIEiJ_G0024365	Esf1	100	78.824	ENSCJAG00000004640	ESF1	100	78.941	Callithrix_jacchus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.934	ENSCAFG00000005587	ESF1	100	77.934	Canis_familiaris
MGP_CAROLIEiJ_G0024365	Esf1	100	77.934	ENSCAFG00020027530	ESF1	100	77.934	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024365	Esf1	100	79.172	ENSCHIG00000021188	ESF1	100	79.408	Capra_hircus
MGP_CAROLIEiJ_G0024365	Esf1	100	80.094	ENSTSYG00000009956	ESF1	100	79.623	Carlito_syrichta
MGP_CAROLIEiJ_G0024365	Esf1	100	68.802	ENSCAPG00000010466	-	100	68.683	Cavia_aperea
MGP_CAROLIEiJ_G0024365	Esf1	80	80.832	ENSCAPG00000010333	-	89	95.833	Cavia_aperea
MGP_CAROLIEiJ_G0024365	Esf1	100	80.404	ENSCPOG00000014027	-	100	79.691	Cavia_porcellus
MGP_CAROLIEiJ_G0024365	Esf1	100	79.412	ENSCCAG00000024521	ESF1	100	79.059	Cebus_capucinus
MGP_CAROLIEiJ_G0024365	Esf1	100	80.024	ENSCATG00000042792	ESF1	100	80.657	Cercocebus_atys
MGP_CAROLIEiJ_G0024365	Esf1	100	81.613	ENSCLAG00000013266	-	100	81.257	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024365	Esf1	100	79.529	ENSCSAG00000011777	ESF1	100	79.906	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024365	Esf1	67	50.000	ENSCSAVG00000009015	-	87	49.206	Ciona_savignyi
MGP_CAROLIEiJ_G0024365	Esf1	100	79.649	ENSCANG00000030674	ESF1	100	80.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024365	Esf1	100	87.173	ENSCGRG00001018257	Esf1	100	87.189	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024365	Esf1	74	63.077	ENSCSEG00000001159	esf1	85	63.492	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024365	Esf1	73	74.242	ENSCVAG00000007894	esf1	91	68.056	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024365	Esf1	74	67.568	ENSDARG00000008740	esf1	86	68.056	Danio_rerio
MGP_CAROLIEiJ_G0024365	Esf1	100	77.412	ENSDNOG00000019409	ESF1	100	76.941	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024365	Esf1	100	81.613	ENSDORG00000016313	Esf1	100	81.257	Dipodomys_ordii
MGP_CAROLIEiJ_G0024365	Esf1	70	49.412	FBgn0024364	CG11417	80	54.286	Drosophila_melanogaster
MGP_CAROLIEiJ_G0024365	Esf1	79	79.957	ENSETEG00000004471	ESF1	78	79.531	Echinops_telfairi
MGP_CAROLIEiJ_G0024365	Esf1	99	43.715	ENSEBUG00000015161	esf1	99	43.922	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024365	Esf1	100	80.235	ENSEASG00005001777	ESF1	100	79.529	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024365	Esf1	100	80.118	ENSECAG00000019188	ESF1	100	79.647	Equus_caballus
MGP_CAROLIEiJ_G0024365	Esf1	74	56.495	ENSEEUG00000015837	-	100	56.495	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024365	Esf1	75	67.949	ENSELUG00000000408	esf1	82	68.056	Esox_lucius
MGP_CAROLIEiJ_G0024365	Esf1	100	78.074	ENSFCAG00000000919	ESF1	100	78.023	Felis_catus
MGP_CAROLIEiJ_G0024365	Esf1	66	73.874	ENSFALG00000010914	ESF1	99	60.859	Ficedula_albicollis
MGP_CAROLIEiJ_G0024365	Esf1	100	79.454	ENSFDAG00000014777	ESF1	100	79.097	Fukomys_damarensis
MGP_CAROLIEiJ_G0024365	Esf1	59	60.792	ENSFHEG00000014984	esf1	99	61.188	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024365	Esf1	100	61.176	ENSGALG00000034768	ESF1	100	59.606	Gallus_gallus
MGP_CAROLIEiJ_G0024365	Esf1	75	67.568	ENSGAFG00000000540	esf1	99	68.056	Gambusia_affinis
MGP_CAROLIEiJ_G0024365	Esf1	100	79.157	ENSGGOG00000006692	ESF1	100	79.391	Gorilla_gorilla
MGP_CAROLIEiJ_G0024365	Esf1	82	71.429	ENSHBUG00000001890	esf1	88	70.833	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024365	Esf1	100	80.190	ENSHGLG00000011505	ESF1	100	79.834	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024365	Esf1	100	80.190	ENSHGLG00100015045	ESF1	100	79.834	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024365	Esf1	75	67.949	ENSIPUG00000006507	esf1	85	68.056	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024365	Esf1	100	81.139	ENSSTOG00000009846	ESF1	100	80.190	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024365	Esf1	100	80.094	ENSJJAG00000012570	Esf1	100	80.094	Jaculus_jaculus
MGP_CAROLIEiJ_G0024365	Esf1	65	67.549	ENSLACG00000016439	ESF1	66	67.958	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024365	Esf1	75	66.667	ENSLOCG00000015979	esf1	82	68.056	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024365	Esf1	100	78.251	ENSLAFG00000005479	ESF1	100	78.487	Loxodonta_africana
MGP_CAROLIEiJ_G0024365	Esf1	100	79.906	ENSMFAG00000036841	ESF1	100	80.539	Macaca_fascicularis
MGP_CAROLIEiJ_G0024365	Esf1	100	79.788	ENSMNEG00000044042	ESF1	100	80.422	Macaca_nemestrina
MGP_CAROLIEiJ_G0024365	Esf1	100	79.788	ENSMLEG00000037121	ESF1	100	80.422	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024365	Esf1	75	72.973	ENSMAMG00000018648	esf1	88	73.611	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024365	Esf1	59	60.714	ENSMZEG00005013912	esf1	99	60.317	Maylandia_zebra
MGP_CAROLIEiJ_G0024365	Esf1	100	61.475	ENSMGAG00000004291	ESF1	100	61.027	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024365	Esf1	100	87.411	ENSMAUG00000015975	Esf1	100	87.411	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024365	Esf1	100	81.316	ENSMICG00000010711	ESF1	100	81.904	Microcebus_murinus
MGP_CAROLIEiJ_G0024365	Esf1	100	85.392	ENSMOCG00000005902	Esf1	100	84.798	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024365	Esf1	59	59.579	ENSMMOG00000018693	esf1	99	59.886	Mola_mola
MGP_CAROLIEiJ_G0024365	Esf1	100	68.241	ENSMODG00000005066	ESF1	100	67.178	Monodelphis_domestica
MGP_CAROLIEiJ_G0024365	Esf1	72	68.919	ENSMALG00000007338	esf1	86	69.444	Monopterus_albus
MGP_CAROLIEiJ_G0024365	Esf1	100	97.160	ENSMUSG00000045624	Esf1	100	97.160	Mus_musculus
MGP_CAROLIEiJ_G0024365	Esf1	100	95.616	MGP_PahariEiJ_G0025810	Esf1	100	95.616	Mus_pahari
MGP_CAROLIEiJ_G0024365	Esf1	100	97.743	MGP_SPRETEiJ_G0025285	Esf1	100	97.743	Mus_spretus
MGP_CAROLIEiJ_G0024365	Esf1	100	79.157	ENSMPUG00000001450	ESF1	100	79.040	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024365	Esf1	100	77.817	ENSMLUG00000013080	ESF1	100	78.521	Myotis_lucifugus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.049	ENSNLEG00000014563	ESF1	100	77.166	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024365	Esf1	60	81.028	ENSOPRG00000004862	ESF1	100	81.028	Ochotona_princeps
MGP_CAROLIEiJ_G0024365	Esf1	100	79.597	ENSODEG00000006824	ESF1	100	79.478	Octodon_degus
MGP_CAROLIEiJ_G0024365	Esf1	78	71.429	ENSONIG00000006804	esf1	87	70.833	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024365	Esf1	100	67.450	ENSOANG00000008432	-	100	68.213	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.700	ENSOCUG00000005414	ESF1	100	77.700	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024365	Esf1	59	55.703	ENSORLG00000018625	esf1	99	54.373	Oryzias_latipes
MGP_CAROLIEiJ_G0024365	Esf1	75	70.513	ENSORLG00015022826	esf1	91	69.444	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024365	Esf1	59	53.700	ENSOMEG00000009311	esf1	99	54.389	Oryzias_melastigma
MGP_CAROLIEiJ_G0024365	Esf1	100	77.396	ENSOGAG00000016912	ESF1	100	77.160	Otolemur_garnettii
MGP_CAROLIEiJ_G0024365	Esf1	100	76.617	ENSOARG00000011158	ESF1	100	76.504	Ovis_aries
MGP_CAROLIEiJ_G0024365	Esf1	100	79.412	ENSPPAG00000024379	ESF1	100	79.647	Pan_paniscus
MGP_CAROLIEiJ_G0024365	Esf1	100	78.231	ENSPPRG00000012007	ESF1	100	78.180	Panthera_pardus
MGP_CAROLIEiJ_G0024365	Esf1	100	78.322	ENSPTIG00000020063	ESF1	100	78.154	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024365	Esf1	100	79.298	ENSPTRG00000013258	ESF1	100	79.298	Pan_troglodytes
MGP_CAROLIEiJ_G0024365	Esf1	76	67.442	ENSPKIG00000024448	esf1	78	70.833	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024365	Esf1	80	64.935	ENSPMGG00000016911	esf1	81	65.278	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024365	Esf1	100	67.133	ENSPCIG00000019331	ESF1	100	61.982	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024365	Esf1	77	63.514	ENSPFOG00000010101	esf1	88	65.278	Poecilia_formosa
MGP_CAROLIEiJ_G0024365	Esf1	59	56.867	ENSPLAG00000006452	esf1	99	56.673	Poecilia_latipinna
MGP_CAROLIEiJ_G0024365	Esf1	75	64.865	ENSPMEG00000000713	esf1	89	65.278	Poecilia_mexicana
MGP_CAROLIEiJ_G0024365	Esf1	75	66.216	ENSPREG00000004431	esf1	86	66.667	Poecilia_reticulata
MGP_CAROLIEiJ_G0024365	Esf1	100	79.766	ENSPPYG00000010715	ESF1	100	79.649	Pongo_abelii
MGP_CAROLIEiJ_G0024365	Esf1	100	71.529	ENSPCAG00000006881	ESF1	100	71.412	Procavia_capensis
MGP_CAROLIEiJ_G0024365	Esf1	83	91.667	ENSPVAG00000001295	ESF1	83	91.667	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024365	Esf1	82	68.831	ENSPNYG00000015735	esf1	88	69.444	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024365	Esf1	74	64.865	ENSPNAG00000014721	esf1	100	51.370	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024365	Esf1	100	90.684	ENSRNOG00000004777	Esf1	100	90.802	Rattus_norvegicus
MGP_CAROLIEiJ_G0024365	Esf1	100	79.577	ENSRBIG00000035763	ESF1	100	79.812	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024365	Esf1	100	79.625	ENSRROG00000032022	ESF1	100	79.742	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024365	Esf1	55	32.998	YDR365C	-	73	33.333	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0024365	Esf1	100	78.195	ENSSBOG00000030387	ESF1	100	78.312	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024365	Esf1	100	68.042	ENSSHAG00000000449	ESF1	100	67.409	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024365	Esf1	77	70.270	ENSSDUG00000019460	esf1	92	70.833	Seriola_dumerili
MGP_CAROLIEiJ_G0024365	Esf1	100	61.720	ENSSPUG00000012635	ESF1	70	73.262	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024365	Esf1	76	71.795	ENSSPAG00000019077	esf1	87	72.222	Stegastes_partitus
MGP_CAROLIEiJ_G0024365	Esf1	100	77.610	ENSSSCG00000007077	ESF1	100	78.770	Sus_scrofa
MGP_CAROLIEiJ_G0024365	Esf1	100	58.428	ENSTGUG00000002450	ESF1	64	73.118	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024365	Esf1	81	58.803	ENSTRUG00000009445	esf1	86	71.429	Takifugu_rubripes
MGP_CAROLIEiJ_G0024365	Esf1	72	86.131	ENSTBEG00000008552	ESF1	76	86.131	Tupaia_belangeri
MGP_CAROLIEiJ_G0024365	Esf1	100	76.779	ENSTTRG00000005335	ESF1	100	77.544	Tursiops_truncatus
MGP_CAROLIEiJ_G0024365	Esf1	100	78.246	ENSUMAG00000008579	ESF1	100	78.429	Ursus_maritimus
MGP_CAROLIEiJ_G0024365	Esf1	92	83.539	ENSVPAG00000005291	ESF1	92	83.539	Vicugna_pacos
MGP_CAROLIEiJ_G0024365	Esf1	100	77.113	ENSVVUG00000014318	ESF1	93	77.934	Vulpes_vulpes
MGP_CAROLIEiJ_G0024365	Esf1	75	68.919	ENSXMAG00000017651	esf1	87	69.444	Xiphophorus_maculatus