EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024385 (Gene tree)
Gene ID: 110287283
Gene Symbol: Polr3f
Alias: 2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 11191 bases
Position: chr2:136788693-136799883
Accession: 110287283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0054984	RNA_pol_Rpc34	PF05158.12	3.6e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0054982	-	2169	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054983	-	809	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054986	-	492	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054987	-	690	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0054984	-	951	-	MGP_CAROLIEiJ_P0054984	316 (aa)	XP_021009602	UPI0000003FF2
MGP_CAROLIEiJ_T0054985	-	835	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSG00000132664	POLR3F	100	98.734	Homo_sapiens
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.127	ENSAPOG00000008271	polr3f	100	85.127	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSAMEG00000005222	POLR3F	100	98.418	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024385	Polr3f	100	79.430	ENSACIG00000006705	polr3f	100	79.430	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.759	ENSAOCG00000000687	polr3f	100	85.759	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.443	ENSAPEG00000015263	polr3f	100	85.443	Amphiprion_percula
MGP_CAROLIEiJ_G0024385	Polr3f	87	88.727	ENSATEG00000015539	polr3f	100	88.727	Anabas_testudineus
MGP_CAROLIEiJ_G0024385	Polr3f	87	94.545	ENSAPLG00000005533	POLR3F	100	94.545	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024385	Polr3f	96	91.749	ENSACAG00000014293	POLR3F	98	91.749	Anolis_carolinensis
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSANAG00000026726	POLR3F	100	98.418	Aotus_nancymaae
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.759	ENSACLG00000003615	polr3f	100	85.759	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.392	ENSAMXG00000036020	polr3f	100	86.392	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSBTAG00000008825	POLR3F	100	98.101	Bos_taurus
MGP_CAROLIEiJ_G0024385	Polr3f	94	33.779	WBGene00021112	W09C3.4	95	33.779	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSCJAG00000005159	POLR3F	100	98.418	Callithrix_jacchus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSCAFG00000005420	POLR3F	100	98.101	Canis_familiaris
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSCAFG00020027500	POLR3F	100	98.101	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSCHIG00000014743	POLR3F	100	98.101	Capra_hircus
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSTSYG00000004207	POLR3F	100	97.785	Carlito_syrichta
MGP_CAROLIEiJ_G0024385	Polr3f	93	55.068	ENSCAPG00000008423	POLR3F	100	55.068	Cavia_aperea
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSCPOG00000002400	POLR3F	100	97.785	Cavia_porcellus
MGP_CAROLIEiJ_G0024385	Polr3f	100	87.658	ENSCCAG00000021800	POLR3F	100	87.658	Cebus_capucinus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSCATG00000019507	POLR3F	100	98.418	Cercocebus_atys
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSCLAG00000016296	POLR3F	100	97.785	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSCSAG00000011513	POLR3F	100	98.418	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024385	Polr3f	73	98.601	ENSCHOG00000013268	POLR3F	73	98.601	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024385	Polr3f	87	93.091	ENSCPBG00000023473	POLR3F	100	93.091	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024385	Polr3f	99	60.635	ENSCING00000001212	-	99	60.635	Ciona_intestinalis
MGP_CAROLIEiJ_G0024385	Polr3f	70	59.193	ENSCSAVG00000003340	-	96	65.680	Ciona_savignyi
MGP_CAROLIEiJ_G0024385	Polr3f	92	98.625	ENSCANG00000037390	POLR3F	100	98.625	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSCGRG00001002032	Polr3f	100	98.101	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSCGRG00000010852	Polr3f	100	98.101	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024385	Polr3f	100	83.544	ENSCSEG00000001247	polr3f	100	83.544	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.443	ENSCVAG00000007611	polr3f	100	85.443	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	87.342	ENSDARG00000012572	polr3f	100	87.342	Danio_rerio
MGP_CAROLIEiJ_G0024385	Polr3f	100	95.886	ENSDNOG00000010719	POLR3F	100	95.886	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSDORG00000016352	Polr3f	100	98.734	Dipodomys_ordii
MGP_CAROLIEiJ_G0024385	Polr3f	95	49.667	FBgn0038951	CG5380	99	49.667	Drosophila_melanogaster
MGP_CAROLIEiJ_G0024385	Polr3f	89	60.142	ENSETEG00000015485	-	100	60.142	Echinops_telfairi
MGP_CAROLIEiJ_G0024385	Polr3f	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSEASG00005002022	POLR3F	100	98.734	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSECAG00000009920	POLR3F	100	98.734	Equus_caballus
MGP_CAROLIEiJ_G0024385	Polr3f	80	88.000	ENSEEUG00000000184	POLR3F	80	88.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024385	Polr3f	100	87.975	ENSELUG00000001558	polr3f	100	87.975	Esox_lucius
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSFCAG00000013828	POLR3F	100	98.418	Felis_catus
MGP_CAROLIEiJ_G0024385	Polr3f	87	94.182	ENSFALG00000007623	POLR3F	100	94.182	Ficedula_albicollis
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.468	ENSFDAG00000002528	POLR3F	100	97.468	Fukomys_damarensis
MGP_CAROLIEiJ_G0024385	Polr3f	100	82.911	ENSFHEG00000006450	polr3f	100	82.911	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024385	Polr3f	100	92.722	ENSGALG00000008749	POLR3F	100	92.722	Gallus_gallus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSGAFG00000003698	polr3f	100	84.494	Gambusia_affinis
MGP_CAROLIEiJ_G0024385	Polr3f	100	92.089	ENSGAGG00000006151	POLR3F	100	92.089	Gopherus_agassizii
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSGGOG00000011543	POLR3F	100	98.734	Gorilla_gorilla
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.076	ENSHBUG00000013806	polr3f	100	86.076	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSHGLG00000011867	POLR3F	100	97.785	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSHGLG00100012577	POLR3F	100	97.785	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024385	Polr3f	100	76.582	ENSHCOG00000011751	polr3f	100	76.582	Hippocampus_comes
MGP_CAROLIEiJ_G0024385	Polr3f	98	86.495	ENSIPUG00000013347	polr3f	99	86.495	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSSTOG00000013588	POLR3F	100	98.418	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSJJAG00000017513	Polr3f	100	98.418	Jaculus_jaculus
MGP_CAROLIEiJ_G0024385	Polr3f	87	81.091	ENSKMAG00000016495	polr3f	100	81.091	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024385	Polr3f	73	92.241	ENSLBEG00000011998	polr3f	100	92.241	Labrus_bergylta
MGP_CAROLIEiJ_G0024385	Polr3f	100	89.241	ENSLACG00000009371	POLR3F	100	89.241	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024385	Polr3f	100	88.924	ENSLOCG00000015701	polr3f	100	88.924	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSLAFG00000004929	POLR3F	100	97.785	Loxodonta_africana
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSMFAG00000002227	POLR3F	100	98.418	Macaca_fascicularis
MGP_CAROLIEiJ_G0024385	Polr3f	87	98.182	ENSMMUG00000004143	POLR3F	100	98.182	Macaca_mulatta
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSMNEG00000033404	POLR3F	100	98.418	Macaca_nemestrina
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSMLEG00000021905	POLR3F	100	98.418	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.127	ENSMAMG00000017975	polr3f	100	85.127	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.076	ENSMZEG00005015134	polr3f	100	86.076	Maylandia_zebra
MGP_CAROLIEiJ_G0024385	Polr3f	100	92.405	ENSMGAG00000006691	POLR3F	100	92.405	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSMAUG00000020176	Polr3f	100	98.418	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024385	Polr3f	100	99.051	ENSMICG00000044519	POLR3F	100	99.051	Microcebus_murinus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSMOCG00000018352	Polr3f	100	98.101	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024385	Polr3f	93	86.869	ENSMMOG00000018477	polr3f	100	86.869	Mola_mola
MGP_CAROLIEiJ_G0024385	Polr3f	100	96.835	ENSMODG00000005624	POLR3F	100	96.835	Monodelphis_domestica
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.076	ENSMALG00000006685	polr3f	100	86.076	Monopterus_albus
MGP_CAROLIEiJ_G0024385	Polr3f	100	100.000	ENSMUSG00000027427	Polr3f	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0024385	Polr3f	100	100.000	MGP_PahariEiJ_G0025829	Polr3f	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0024385	Polr3f	100	100.000	MGP_SPRETEiJ_G0025304	Polr3f	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0024385	Polr3f	100	76.615	ENSMPUG00000001252	-	100	76.615	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSMLUG00000014844	POLR3F	100	98.101	Myotis_lucifugus
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.785	ENSNGAG00000010898	Polr3f	100	97.785	Nannospalax_galili
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.392	ENSNBRG00000020796	polr3f	100	86.392	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSNLEG00000009778	POLR3F	100	98.734	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024385	Polr3f	93	90.508	ENSMEUG00000010320	POLR3F	100	90.508	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024385	Polr3f	100	95.570	ENSOPRG00000003385	POLR3F	100	95.570	Ochotona_princeps
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.468	ENSODEG00000011521	POLR3F	100	97.468	Octodon_degus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.810	ENSONIG00000006858	polr3f	100	84.810	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024385	Polr3f	100	95.570	ENSOANG00000001253	POLR3F	100	95.570	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSOCUG00000015067	POLR3F	100	98.101	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSORLG00000022412	polr3f	100	84.494	Oryzias_latipes
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSORLG00020021944	polr3f	100	84.494	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.468	ENSOGAG00000002916	POLR3F	100	97.468	Otolemur_garnettii
MGP_CAROLIEiJ_G0024385	Polr3f	100	61.709	ENSOARG00000008647	-	100	61.709	Ovis_aries
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSOARG00000000315	-	100	98.101	Ovis_aries
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSPPAG00000036681	POLR3F	100	98.734	Pan_paniscus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSPPRG00000024604	POLR3F	100	98.418	Panthera_pardus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSPTIG00000020292	POLR3F	100	98.418	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSPTRG00000013287	POLR3F	100	98.734	Pan_troglodytes
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSPANG00000025015	POLR3F	100	98.418	Papio_anubis
MGP_CAROLIEiJ_G0024385	Polr3f	100	87.975	ENSPKIG00000004427	polr3f	100	87.975	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024385	Polr3f	87	94.182	ENSPSIG00000016613	POLR3F	100	94.182	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024385	Polr3f	100	53.918	ENSPMGG00000018350	polr3f	100	56.013	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSPEMG00000006966	Polr3f	100	98.418	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024385	Polr3f	100	79.747	ENSPMAG00000005530	polr3f	100	79.747	Petromyzon_marinus
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.152	ENSPCIG00000000908	POLR3F	85	97.152	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSPFOG00000018334	polr3f	100	84.494	Poecilia_formosa
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSPLAG00000021803	polr3f	100	84.494	Poecilia_latipinna
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSPMEG00000013150	polr3f	100	84.494	Poecilia_mexicana
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSPREG00000005278	polr3f	100	84.494	Poecilia_reticulata
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.734	ENSPPYG00000010737	POLR3F	100	98.734	Pongo_abelii
MGP_CAROLIEiJ_G0024385	Polr3f	66	98.333	ENSPCAG00000004893	POLR3F	71	98.333	Procavia_capensis
MGP_CAROLIEiJ_G0024385	Polr3f	100	99.051	ENSPCOG00000004543	POLR3F	100	99.051	Propithecus_coquereli
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSPVAG00000000403	POLR3F	100	98.101	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024385	Polr3f	100	86.076	ENSPNYG00000016276	polr3f	100	86.076	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024385	Polr3f	100	87.025	ENSPNAG00000005164	polr3f	100	87.025	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024385	Polr3f	100	99.051	ENSRNOG00000007548	Polr3f	85	99.051	Rattus_norvegicus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSRBIG00000021268	POLR3F	100	98.418	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSRROG00000039911	POLR3F	100	98.418	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSSBOG00000018207	POLR3F	100	98.418	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024385	Polr3f	100	76.341	ENSSHAG00000018160	POLR3F	100	75.394	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024385	Polr3f	100	88.291	ENSSFOG00015022433	polr3f	100	88.291	Scleropages_formosus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.494	ENSSMAG00000021029	polr3f	100	84.494	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024385	Polr3f	100	76.266	ENSSDUG00000022435	polr3f	100	76.266	Seriola_dumerili
MGP_CAROLIEiJ_G0024385	Polr3f	100	85.759	ENSSLDG00000012761	polr3f	100	85.759	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024385	Polr3f	100	88.291	ENSSARG00000006039	POLR3F	100	88.291	Sorex_araneus
MGP_CAROLIEiJ_G0024385	Polr3f	100	93.038	ENSSPUG00000001873	POLR3F	100	93.038	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024385	Polr3f	100	78.165	ENSSPAG00000002092	polr3f	100	78.165	Stegastes_partitus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	ENSSSCG00000007095	POLR3F	100	98.418	Sus_scrofa
MGP_CAROLIEiJ_G0024385	Polr3f	100	92.089	ENSTGUG00000005839	POLR3F	100	92.089	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024385	Polr3f	100	83.861	ENSTRUG00000012101	polr3f	100	83.861	Takifugu_rubripes
MGP_CAROLIEiJ_G0024385	Polr3f	100	83.228	ENSTNIG00000006456	polr3f	100	83.228	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024385	Polr3f	100	81.962	ENSTBEG00000007921	POLR3F	100	81.962	Tupaia_belangeri
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSTTRG00000002580	POLR3F	100	98.101	Tursiops_truncatus
MGP_CAROLIEiJ_G0024385	Polr3f	53	96.386	ENSUAMG00000024166	POLR3F	100	96.386	Ursus_americanus
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSUMAG00000024944	POLR3F	100	98.101	Ursus_maritimus
MGP_CAROLIEiJ_G0024385	Polr3f	100	97.468	ENSVPAG00000009063	POLR3F	100	97.468	Vicugna_pacos
MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	ENSVVUG00000012925	POLR3F	100	98.101	Vulpes_vulpes
MGP_CAROLIEiJ_G0024385	Polr3f	100	88.291	ENSXETG00000024898	polr3f	100	88.291	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024385	Polr3f	87	86.909	ENSXCOG00000010301	polr3f	100	86.909	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024385	Polr3f	100	84.810	ENSXMAG00000004604	polr3f	100	84.810	Xiphophorus_maculatus