EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024394 (Gene tree)
Gene ID
110309327
Gene Symbol
Crnkl1
Alias
1200013P10Rik|5730590A01Rik|crn
Full Name
crooked neck pre-mRNA splicing factor 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
17383 bases
Position
chr2:138136727-138154109
Accession
110309327
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0055025HATPF02184.162.5e-3912
MGP_CAROLIEiJ_P0055025HATPF02184.162.5e-3922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0055026-431--- (aa)--
MGP_CAROLIEiJ_T0055027-683--- (aa)--
MGP_CAROLIEiJ_T0055025-3485-MGP_CAROLIEiJ_P0055025690 (aa)XP_021037580UPI000A31517C
Gene Model
Click here to download MGP_CAROLIEiJ_G0024394's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024394's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSG00000101343CRNKL110096.361Homo_sapiens
MGP_CAROLIEiJ_G0024394Crnkl19986.152ENSAPOG00000009705crnkl19786.222Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSAMEG00000000270CRNKL18398.544Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024394Crnkl19886.202ENSACIG00000015267crnkl18986.202Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024394Crnkl19986.297ENSAOCG00000021964crnkl19186.297Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024394Crnkl19986.026ENSAPEG00000015041crnkl19186.026Amphiprion_percula
MGP_CAROLIEiJ_G0024394Crnkl19985.320ENSATEG00000001068crnkl18986.176Anabas_testudineus
MGP_CAROLIEiJ_G0024394Crnkl19990.102ENSAPLG00000013105CRNKL19990.102Anas_platyrhynchos
MGP_CAROLIEiJ_G0024394Crnkl19992.533ENSACAG00000005284CRNKL19992.533Anolis_carolinensis
MGP_CAROLIEiJ_G0024394Crnkl19296.994ENSANAG00000024889CRNKL110096.994Aotus_nancymaae
MGP_CAROLIEiJ_G0024394Crnkl19986.172ENSACLG00000010813crnkl19186.172Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024394Crnkl19687.651ENSAMXG00000018334crnkl19385.735Astyanax_mexicanus
MGP_CAROLIEiJ_G0024394Crnkl19996.802ENSBTAG00000008472CRNKL19996.802Bos_taurus
MGP_CAROLIEiJ_G0024394Crnkl19361.957WBGene00019762M03F8.39261.014Caenorhabditis_elegans
MGP_CAROLIEiJ_G0024394Crnkl19996.215ENSCJAG00000005393CRNKL110096.215Callithrix_jacchus
MGP_CAROLIEiJ_G0024394Crnkl19998.253ENSCAFG00000005333CRNKL19498.253Canis_familiaris
MGP_CAROLIEiJ_G0024394Crnkl19998.253ENSCAFG00020027488CRNKL110098.253Canis_lupus_dingo
MGP_CAROLIEiJ_G0024394Crnkl19996.076ENSCHIG00000013171CRNKL19996.076Capra_hircus
MGP_CAROLIEiJ_G0024394Crnkl19997.089ENSTSYG00000004197CRNKL110097.089Carlito_syrichta
MGP_CAROLIEiJ_G0024394Crnkl19596.613ENSCAPG00000010501CRNKL19996.613Cavia_aperea
MGP_CAROLIEiJ_G0024394Crnkl19996.798ENSCPOG00000004418CRNKL110096.798Cavia_porcellus
MGP_CAROLIEiJ_G0024394Crnkl19996.215ENSCCAG00000027037CRNKL110096.215Cebus_capucinus
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSCATG00000034247CRNKL110096.361Cercocebus_atys
MGP_CAROLIEiJ_G0024394Crnkl19997.525ENSCLAG00000013859CRNKL110097.525Chinchilla_lanigera
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSCSAG00000011434CRNKL110096.361Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024394Crnkl19997.671ENSCHOG00000006371CRNKL18497.671Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024394Crnkl19993.869ENSCPBG00000023501CRNKL19993.869Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024394Crnkl19669.335ENSCING00000002709-9967.836Ciona_intestinalis
MGP_CAROLIEiJ_G0024394Crnkl19996.507ENSCANG00000038789CRNKL110096.507Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024394Crnkl110098.986ENSCGRG00001001115-10098.986Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024394Crnkl110098.986ENSCGRG00001000687-10098.986Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024394Crnkl110098.986ENSCGRG00000007854Crnkl110098.986Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024394Crnkl19886.095ENSCSEG00000005594crnkl18784.928Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024394Crnkl19787.237ENSCVAG00000015172crnkl19285.444Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024394Crnkl19686.707ENSDARG00000007901crnkl19185.234Danio_rerio
MGP_CAROLIEiJ_G0024394Crnkl19998.099ENSDNOG00000016226CRNKL19598.099Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024394Crnkl19788.955ENSDORG00000023724-9988.955Dipodomys_ordii
MGP_CAROLIEiJ_G0024394Crnkl19996.681ENSDORG00000000394-10096.681Dipodomys_ordii
MGP_CAROLIEiJ_G0024394Crnkl19788.358ENSDORG00000030174-9988.358Dipodomys_ordii
MGP_CAROLIEiJ_G0024394Crnkl19669.219FBgn0000377crn9967.050Drosophila_melanogaster
MGP_CAROLIEiJ_G0024394Crnkl19985.007ENSETEG00000003711CRNKL18485.007Echinops_telfairi
MGP_CAROLIEiJ_G0024394Crnkl19960.956ENSEBUG00000013461crnkl19658.272Eptatretus_burgeri
MGP_CAROLIEiJ_G0024394Crnkl19998.253ENSEASG00005002072CRNKL110098.253Equus_asinus_asinus
MGP_CAROLIEiJ_G0024394Crnkl19998.253ENSECAG00000022215CRNKL110098.253Equus_caballus
MGP_CAROLIEiJ_G0024394Crnkl19995.000ENSEEUG00000000413CRNKL19295.051Erinaceus_europaeus
MGP_CAROLIEiJ_G0024394Crnkl19785.224ENSELUG00000015424crnkl19883.890Esox_lucius
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSFCAG00000000714CRNKL110098.544Felis_catus
MGP_CAROLIEiJ_G0024394Crnkl19791.369ENSFALG00000004611CRNKL110091.369Ficedula_albicollis
MGP_CAROLIEiJ_G0024394Crnkl19997.525ENSFDAG00000000604CRNKL110097.525Fukomys_damarensis
MGP_CAROLIEiJ_G0024394Crnkl19886.330ENSFHEG00000013163crnkl19085.072Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024394Crnkl19785.629ENSGMOG00000007609crnkl19285.629Gadus_morhua
MGP_CAROLIEiJ_G0024394Crnkl19993.139ENSGALG00000008429CRNKL19993.139Gallus_gallus
MGP_CAROLIEiJ_G0024394Crnkl19786.787ENSGAFG00000014249crnkl18985.926Gambusia_affinis
MGP_CAROLIEiJ_G0024394Crnkl19786.357ENSGACG00000011852crnkl18986.357Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024394Crnkl19592.683ENSGAGG00000021233CRNKL110092.730Gopherus_agassizii
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSGGOG00000014176CRNKL110096.361Gorilla_gorilla
MGP_CAROLIEiJ_G0024394Crnkl19986.026ENSHBUG00000005246crnkl19186.026Haplochromis_burtoni
MGP_CAROLIEiJ_G0024394Crnkl19997.380ENSHGLG00000010856CRNKL110097.380Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024394Crnkl19997.380ENSHGLG00100011521CRNKL110097.380Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024394Crnkl19784.408ENSHCOG00000006420crnkl19982.387Hippocampus_comes
MGP_CAROLIEiJ_G0024394Crnkl19675.639ENSIPUG00000006836-9975.000Ictalurus_punctatus
MGP_CAROLIEiJ_G0024394Crnkl19268.603ENSIPUG00000000315-10069.811Ictalurus_punctatus
MGP_CAROLIEiJ_G0024394Crnkl19487.365ENSIPUG00000006751crnkl19385.672Ictalurus_punctatus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSSTOG00000014747CRNKL110098.544Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024394Crnkl19996.586ENSJJAG00000016926Crnkl110096.586Jaculus_jaculus
MGP_CAROLIEiJ_G0024394Crnkl19985.486ENSKMAG00000003620crnkl18885.486Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024394Crnkl19770.431ENSLBEG00000003543crnkl19370.478Labrus_bergylta
MGP_CAROLIEiJ_G0024394Crnkl19987.994ENSLACG00000001129CRNKL19987.994Latimeria_chalumnae
MGP_CAROLIEiJ_G0024394Crnkl19689.006ENSLOCG00000016889crnkl19488.035Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024394Crnkl19997.820ENSLAFG00000004512CRNKL110097.820Loxodonta_africana
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSMFAG00000039893CRNKL110096.361Macaca_fascicularis
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSMMUG00000007709CRNKL110096.361Macaca_mulatta
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSMNEG00000037490CRNKL110096.361Macaca_nemestrina
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSMLEG00000034885CRNKL110096.361Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024394Crnkl19985.444ENSMAMG00000008757crnkl19185.444Mastacembelus_armatus
MGP_CAROLIEiJ_G0024394Crnkl19986.172ENSMZEG00005022345crnkl19186.172Maylandia_zebra
MGP_CAROLIEiJ_G0024394Crnkl19992.420ENSMGAG00000003452CRNKL19492.420Meleagris_gallopavo
MGP_CAROLIEiJ_G0024394Crnkl110098.841ENSMAUG00000020764Crnkl110098.841Mesocricetus_auratus
MGP_CAROLIEiJ_G0024394Crnkl19997.525ENSMICG00000006048CRNKL110097.525Microcebus_murinus
MGP_CAROLIEiJ_G0024394Crnkl110090.883ENSMOCG00000000681-10090.883Microtus_ochrogaster
MGP_CAROLIEiJ_G0024394Crnkl19670.420ENSMOCG00000004179-9869.320Microtus_ochrogaster
MGP_CAROLIEiJ_G0024394Crnkl19185.261ENSMMOG00000017601crnkl19785.261Mola_mola
MGP_CAROLIEiJ_G0024394Crnkl110085.797ENSMODG00000010857-10085.797Monodelphis_domestica
MGP_CAROLIEiJ_G0024394Crnkl19991.810ENSMODG00000005961-9991.810Monodelphis_domestica
MGP_CAROLIEiJ_G0024394Crnkl19962.063ENSMALG00000011211crnkl19062.428Monopterus_albus
MGP_CAROLIEiJ_G0024394Crnkl110099.855ENSMUSG00000001767Crnkl110099.855Mus_musculus
MGP_CAROLIEiJ_G0024394Crnkl110097.826MGP_PahariEiJ_G0025838Crnkl110097.826Mus_pahari
MGP_CAROLIEiJ_G0024394Crnkl110099.710MGP_SPRETEiJ_G0025312Crnkl110099.710Mus_spretus
MGP_CAROLIEiJ_G0024394Crnkl19998.399ENSMPUG00000001226CRNKL110098.399Mustela_putorius_furo
MGP_CAROLIEiJ_G0024394Crnkl19997.674ENSMLUG00000016513CRNKL18997.674Myotis_lucifugus
MGP_CAROLIEiJ_G0024394Crnkl19996.143ENSNGAG00000023097Crnkl110096.143Nannospalax_galili
MGP_CAROLIEiJ_G0024394Crnkl19986.317ENSNBRG00000007867crnkl19186.317Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024394Crnkl19992.868ENSNLEG00000009862CRNKL110092.868Nomascus_leucogenys
MGP_CAROLIEiJ_G0024394Crnkl19986.047ENSMEUG00000002361-9986.047Notamacropus_eugenii
MGP_CAROLIEiJ_G0024394Crnkl19794.925ENSMEUG00000012167-10094.925Notamacropus_eugenii
MGP_CAROLIEiJ_G0024394Crnkl18668.147ENSOPRG00000009242-6168.147Ochotona_princeps
MGP_CAROLIEiJ_G0024394Crnkl19997.380ENSODEG00000012175CRNKL110097.380Octodon_degus
MGP_CAROLIEiJ_G0024394Crnkl19986.463ENSONIG00000018728crnkl19186.463Oreochromis_niloticus
MGP_CAROLIEiJ_G0024394Crnkl19998.251ENSOCUG00000015484CRNKL18398.251Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024394Crnkl19983.796ENSORLG00000017240crnkl19679.827Oryzias_latipes
MGP_CAROLIEiJ_G0024394Crnkl19785.736ENSORLG00020001742crnkl18985.736Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024394Crnkl19983.942ENSORLG00015019564crnkl19183.942Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024394Crnkl19984.818ENSOMEG00000019895crnkl19184.818Oryzias_melastigma
MGP_CAROLIEiJ_G0024394Crnkl19996.507ENSOGAG00000011544CRNKL110096.507Otolemur_garnettii
MGP_CAROLIEiJ_G0024394Crnkl19997.093ENSOARG00000002150CRNKL19097.093Ovis_aries
MGP_CAROLIEiJ_G0024394Crnkl19995.147ENSPPAG00000027847CRNKL18395.197Pan_paniscus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSPPRG00000001955CRNKL110098.544Panthera_pardus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSPTIG00000007393CRNKL110098.544Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024394Crnkl19996.215ENSPTRG00000030609CRNKL110096.215Pan_troglodytes
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSPANG00000017420CRNKL110096.361Papio_anubis
MGP_CAROLIEiJ_G0024394Crnkl19683.008ENSPKIG00000017093crnkl18982.096Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024394Crnkl19992.679ENSPSIG00000012705CRNKL19992.679Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024394Crnkl19979.179ENSPMGG00000006263crnkl19679.179Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024394Crnkl110098.986ENSPEMG00000000073-9998.986Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024394Crnkl19981.739ENSPMAG00000002250crnkl19981.739Petromyzon_marinus
MGP_CAROLIEiJ_G0024394Crnkl19994.323ENSPCIG00000025825CRNKL19694.323Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024394Crnkl19786.637ENSPFOG00000005102crnkl19384.638Poecilia_formosa
MGP_CAROLIEiJ_G0024394Crnkl19786.637ENSPLAG00000007288crnkl19084.515Poecilia_latipinna
MGP_CAROLIEiJ_G0024394Crnkl19786.787ENSPMEG00000008865crnkl19484.783Poecilia_mexicana
MGP_CAROLIEiJ_G0024394Crnkl19786.336ENSPREG00000012615crnkl19284.425Poecilia_reticulata
MGP_CAROLIEiJ_G0024394Crnkl19996.361ENSPPYG00000010747CRNKL18196.361Pongo_abelii
MGP_CAROLIEiJ_G0024394Crnkl19991.912ENSPCAG00000003296CRNKL18591.994Procavia_capensis
MGP_CAROLIEiJ_G0024394Crnkl19996.176ENSPCOG00000017608CRNKL18396.215Propithecus_coquereli
MGP_CAROLIEiJ_G0024394Crnkl19997.817ENSPVAG00000006207CRNKL18397.817Pteropus_vampyrus
MGP_CAROLIEiJ_G0024394Crnkl19986.026ENSPNYG00000001977crnkl19186.026Pundamilia_nyererei
MGP_CAROLIEiJ_G0024394Crnkl19788.507ENSPNAG00000001507crnkl19883.721Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024394Crnkl110099.855ENSRNOG00000010587Crnkl110099.855Rattus_norvegicus
MGP_CAROLIEiJ_G0024394Crnkl110099.420ENSRNOG00000040045Crnkl110099.420Rattus_norvegicus
MGP_CAROLIEiJ_G0024394Crnkl19996.215ENSRBIG00000031770CRNKL110096.215Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024394Crnkl19996.070ENSRROG00000040450CRNKL110096.070Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024394Crnkl19437.536YLR117CCLF19937.627Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0024394Crnkl19996.215ENSSBOG00000029672CRNKL110096.215Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024394Crnkl19574.355ENSSHAG00000011199CRNKL19974.355Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024394Crnkl19687.764ENSSFOG00015000946crnkl18986.257Scleropages_formosus
MGP_CAROLIEiJ_G0024394Crnkl19786.398ENSSMAG00000007933crnkl18786.398Scophthalmus_maximus
MGP_CAROLIEiJ_G0024394Crnkl19979.330ENSSDUG00000012625crnkl18879.330Seriola_dumerili
MGP_CAROLIEiJ_G0024394Crnkl19985.860ENSSLDG00000021413crnkl18985.860Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024394Crnkl19997.089ENSSARG00000006443CRNKL18297.089Sorex_araneus
MGP_CAROLIEiJ_G0024394Crnkl19992.972ENSSPUG00000005254CRNKL19992.972Sphenodon_punctatus
MGP_CAROLIEiJ_G0024394Crnkl19985.735ENSSPAG00000016150crnkl18985.735Stegastes_partitus
MGP_CAROLIEiJ_G0024394Crnkl19998.110ENSSSCG00000038587CRNKL19998.110Sus_scrofa
MGP_CAROLIEiJ_G0024394Crnkl19991.837ENSTGUG00000007645CRNKL19891.837Taeniopygia_guttata
MGP_CAROLIEiJ_G0024394Crnkl19780.838ENSTRUG00000015417crnkl19079.971Takifugu_rubripes
MGP_CAROLIEiJ_G0024394Crnkl19785.007ENSTNIG00000010710crnkl19983.819Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024394Crnkl19296.519ENSTBEG00000001304CRNKL18296.519Tupaia_belangeri
MGP_CAROLIEiJ_G0024394Crnkl19193.920ENSTTRG00000000484CRNKL18193.987Tursiops_truncatus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSUAMG00000018586CRNKL110098.544Ursus_americanus
MGP_CAROLIEiJ_G0024394Crnkl19998.544ENSUMAG00000024957CRNKL110098.544Ursus_maritimus
MGP_CAROLIEiJ_G0024394Crnkl19998.253ENSVVUG00000012559CRNKL18298.253Vulpes_vulpes
MGP_CAROLIEiJ_G0024394Crnkl19990.539ENSXETG00000009698crnkl19990.539Xenopus_tropicalis
MGP_CAROLIEiJ_G0024394Crnkl19785.907ENSXCOG00000000824crnkl19184.334Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024394Crnkl19786.787ENSXMAG00000006896crnkl19185.191Xiphophorus_maculatus

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