EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024409 (Gene tree)
Gene ID: 110289673
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336
Full Name: GDNF inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 12374 bases
Position: chr2:140805984-140818357
Accession: 110289673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	1	6
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	2	6
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	3	6
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	4	6
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	5	6
MGP_CAROLIEiJ_P0055079	zf-C2H2	PF00096.26	1.2e-34	6	6
MGP_CAROLIEiJ_P0055079	zf-met	PF12874.7	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0055080	-	701	-	MGP_CAROLIEiJ_P0055080	146 (aa)	-	-
MGP_CAROLIEiJ_T0055079	-	4246	XM_021155981	MGP_CAROLIEiJ_P0055079	708 (aa)	XP_021011640	UPI000A319280
MGP_CAROLIEiJ_T0055081	-	734	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0024409	Gzf1	50	30.750	MGP_CAROLIEiJ_G0029356	Zfp574	86	32.468
MGP_CAROLIEiJ_G0024409	Gzf1	58	44.853	MGP_CAROLIEiJ_G0016622	Bcl6b	70	44.853
MGP_CAROLIEiJ_G0024409	Gzf1	64	37.725	MGP_CAROLIEiJ_G0032830	Zfp651	51	37.725
MGP_CAROLIEiJ_G0024409	Gzf1	58	44.103	MGP_CAROLIEiJ_G0027176	Zbtb49	62	46.479
MGP_CAROLIEiJ_G0024409	Gzf1	56	42.529	MGP_CAROLIEiJ_G0029143	-	79	38.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.841	ENSG00000125812	GZF1	100	91.667	Homo_sapiens
MGP_CAROLIEiJ_G0024409	Gzf1	85	49.670	ENSAPOG00000012930	GZF1	94	49.429	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024409	Gzf1	100	76.397	ENSAMEG00000009853	GZF1	100	76.397	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024409	Gzf1	89	45.789	ENSACIG00000004753	-	76	47.205	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024409	Gzf1	84	49.069	ENSAOCG00000024275	GZF1	93	49.662	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024409	Gzf1	86	47.327	ENSAPEG00000017195	GZF1	73	47.642	Amphiprion_percula
MGP_CAROLIEiJ_G0024409	Gzf1	87	42.434	ENSATEG00000018374	GZF1	88	77.596	Anabas_testudineus
MGP_CAROLIEiJ_G0024409	Gzf1	100	81.013	ENSANAG00000028240	GZF1	100	81.013	Aotus_nancymaae
MGP_CAROLIEiJ_G0024409	Gzf1	87	47.634	ENSAMXG00000017178	GZF1	84	46.688	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.591	ENSCJAG00000000733	GZF1	100	80.591	Callithrix_jacchus
MGP_CAROLIEiJ_G0024409	Gzf1	100	79.184	ENSCAFG00000005142	GZF1	100	79.184	Canis_familiaris
MGP_CAROLIEiJ_G0024409	Gzf1	55	84.091	ENSCAFG00020027463	-	100	84.091	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024409	Gzf1	100	76.471	ENSTSYG00000028054	GZF1	100	76.471	Carlito_syrichta
MGP_CAROLIEiJ_G0024409	Gzf1	100	75.698	ENSCAPG00000002173	GZF1	100	75.559	Cavia_aperea
MGP_CAROLIEiJ_G0024409	Gzf1	100	75.559	ENSCPOG00000010790	GZF1	100	75.419	Cavia_porcellus
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.591	ENSCCAG00000035601	GZF1	100	80.591	Cebus_capucinus
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.468	ENSCATG00000039279	GZF1	100	82.468	Cercocebus_atys
MGP_CAROLIEiJ_G0024409	Gzf1	100	74.727	ENSCLAG00000014714	GZF1	100	74.317	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.303	ENSCSAG00000011054	GZF1	100	82.303	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024409	Gzf1	100	72.284	ENSCPBG00000023415	GZF1	100	72.145	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024409	Gzf1	90	52.516	ENSCPBG00000023418	-	50	55.172	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.419	ENSCANG00000041260	GZF1	100	82.419	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024409	Gzf1	100	87.712	ENSCGRG00001003944	Gzf1	100	87.429	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024409	Gzf1	100	87.712	ENSCGRG00000012721	Gzf1	100	87.429	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024409	Gzf1	80	77.391	ENSDNOG00000014290	GZF1	100	77.043	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.048	ENSDORG00000011855	Gzf1	100	81.767	Dipodomys_ordii
MGP_CAROLIEiJ_G0024409	Gzf1	64	75.093	ENSEBUG00000004858	GZF1	58	75.093	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024409	Gzf1	55	87.727	ENSECAG00000040045	-	100	87.727	Equus_caballus
MGP_CAROLIEiJ_G0024409	Gzf1	83	48.257	ENSELUG00000013581	GZF1	86	48.059	Esox_lucius
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.280	ENSFCAG00000006484	GZF1	100	80.140	Felis_catus
MGP_CAROLIEiJ_G0024409	Gzf1	93	76.505	ENSFDAG00000019468	GZF1	96	76.176	Fukomys_damarensis
MGP_CAROLIEiJ_G0024409	Gzf1	89	45.633	ENSFHEG00000020498	GZF1	76	46.729	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024409	Gzf1	87	47.293	ENSGMOG00000011017	GZF1	100	47.352	Gadus_morhua
MGP_CAROLIEiJ_G0024409	Gzf1	100	72.841	ENSGALG00000053640	GZF1	100	72.981	Gallus_gallus
MGP_CAROLIEiJ_G0024409	Gzf1	89	46.213	ENSGAFG00000008725	GZF1	73	46.479	Gambusia_affinis
MGP_CAROLIEiJ_G0024409	Gzf1	87	48.714	ENSGACG00000012415	GZF1	99	70.408	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.749	ENSGGOG00000023248	GZF1	100	82.584	Gorilla_gorilla
MGP_CAROLIEiJ_G0024409	Gzf1	99	42.576	ENSHBUG00000016502	-	51	54.374	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024409	Gzf1	100	75.136	ENSHGLG00000008891	GZF1	100	75.580	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024409	Gzf1	100	75.136	ENSHGLG00100015117	GZF1	100	75.580	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024409	Gzf1	99	41.470	ENSHCOG00000004326	GZF1	57	52.475	Hippocampus_comes
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.609	ENSSTOG00000009820	GZF1	100	82.468	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024409	Gzf1	100	84.196	ENSJJAG00000008172	Gzf1	100	84.196	Jaculus_jaculus
MGP_CAROLIEiJ_G0024409	Gzf1	50	71.579	ENSKMAG00000001453	-	60	72.340	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024409	Gzf1	86	48.403	ENSLBEG00000025803	-	73	47.582	Labrus_bergylta
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.138	ENSLAFG00000002458	GZF1	100	81.997	Loxodonta_africana
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.468	ENSMFAG00000042408	GZF1	100	82.468	Macaca_fascicularis
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.468	ENSMMUG00000022387	GZF1	100	82.468	Macaca_mulatta
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.444	ENSMNEG00000033117	GZF1	100	82.444	Macaca_nemestrina
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.444	ENSMLEG00000036831	GZF1	100	82.444	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024409	Gzf1	99	44.537	ENSMAMG00000011931	-	87	44.242	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024409	Gzf1	87	89.748	ENSMAUG00000019656	Gzf1	100	90.420	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024409	Gzf1	100	81.882	ENSMICG00000046070	GZF1	100	81.742	Microcebus_murinus
MGP_CAROLIEiJ_G0024409	Gzf1	100	87.870	ENSMOCG00000017816	Gzf1	100	87.729	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024409	Gzf1	87	48.940	ENSMMOG00000004395	-	75	47.812	Mola_mola
MGP_CAROLIEiJ_G0024409	Gzf1	100	74.652	ENSMODG00000006238	GZF1	100	81.154	Monodelphis_domestica
MGP_CAROLIEiJ_G0024409	Gzf1	100	97.599	ENSMUSG00000027439	Gzf1	100	97.599	Mus_musculus
MGP_CAROLIEiJ_G0024409	Gzf1	100	97.743	MGP_PahariEiJ_G0025852	Gzf1	100	97.743	Mus_pahari
MGP_CAROLIEiJ_G0024409	Gzf1	100	97.740	MGP_SPRETEiJ_G0025327	Gzf1	100	97.740	Mus_spretus
MGP_CAROLIEiJ_G0024409	Gzf1	100	79.860	ENSMPUG00000001160	GZF1	89	79.441	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024409	Gzf1	98	78.143	ENSMLUG00000002194	GZF1	100	78.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0024409	Gzf1	100	86.639	ENSNGAG00000024012	Gzf1	100	86.217	Nannospalax_galili
MGP_CAROLIEiJ_G0024409	Gzf1	85	42.349	ENSNBRG00000019987	GZF1	98	45.073	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024409	Gzf1	100	81.997	ENSNLEG00000011565	GZF1	100	81.997	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024409	Gzf1	100	74.348	ENSOPRG00000004697	GZF1	100	75.583	Ochotona_princeps
MGP_CAROLIEiJ_G0024409	Gzf1	100	72.191	ENSODEG00000013020	GZF1	100	72.472	Octodon_degus
MGP_CAROLIEiJ_G0024409	Gzf1	87	48.622	ENSONIG00000000989	GZF1	100	48.622	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024409	Gzf1	100	78.652	ENSOCUG00000025214	GZF1	100	78.511	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.872	ENSOGAG00000028389	GZF1	100	80.731	Otolemur_garnettii
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.560	ENSPPAG00000028487	GZF1	100	82.560	Pan_paniscus
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.280	ENSPPRG00000010040	GZF1	100	80.000	Panthera_pardus
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.420	ENSPTIG00000019328	GZF1	100	80.140	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.278	ENSPTRG00000013320	GZF1	100	82.278	Pan_troglodytes
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.303	ENSPANG00000017419	GZF1	100	82.303	Papio_anubis
MGP_CAROLIEiJ_G0024409	Gzf1	89	50.000	ENSPKIG00000003781	GZF1	77	49.150	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024409	Gzf1	100	72.549	ENSPSIG00000014455	GZF1	100	72.145	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024409	Gzf1	62	52.612	ENSPMGG00000003778	-	66	54.733	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024409	Gzf1	100	89.831	ENSPEMG00000011285	Gzf1	100	89.407	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024409	Gzf1	100	74.791	ENSPCIG00000013803	GZF1	100	74.373	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024409	Gzf1	89	46.034	ENSPFOG00000002393	GZF1	100	47.720	Poecilia_formosa
MGP_CAROLIEiJ_G0024409	Gzf1	87	46.497	ENSPLAG00000005232	GZF1	93	46.815	Poecilia_latipinna
MGP_CAROLIEiJ_G0024409	Gzf1	88	41.206	ENSPMEG00000020017	-	70	41.206	Poecilia_mexicana
MGP_CAROLIEiJ_G0024409	Gzf1	89	36.547	ENSPREG00000016398	GZF1	72	42.405	Poecilia_reticulata
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.952	ENSPPYG00000010766	GZF1	100	64.416	Pongo_abelii
MGP_CAROLIEiJ_G0024409	Gzf1	82	81.709	ENSPCAG00000007544	GZF1	100	80.513	Procavia_capensis
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.560	ENSPCOG00000024180	GZF1	100	82.278	Propithecus_coquereli
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.450	ENSPVAG00000014056	GZF1	100	80.450	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024409	Gzf1	54	45.418	ENSPNYG00000000788	-	63	45.418	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024409	Gzf1	100	96.192	ENSRNOG00000004735	Gzf1	100	96.192	Rattus_norvegicus
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.517	ENSRBIG00000028715	GZF1	100	82.517	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024409	Gzf1	100	82.749	ENSRROG00000030533	GZF1	100	82.749	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024409	Gzf1	100	80.450	ENSSBOG00000018893	GZF1	100	80.450	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024409	Gzf1	100	74.579	ENSSHAG00000009367	GZF1	100	74.198	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024409	Gzf1	89	48.204	ENSSFOG00015008631	gzf1	75	47.541	Scleropages_formosus
MGP_CAROLIEiJ_G0024409	Gzf1	88	47.496	ENSSDUG00000008186	GZF1	74	47.130	Seriola_dumerili
MGP_CAROLIEiJ_G0024409	Gzf1	88	47.872	ENSSLDG00000002382	GZF1	74	47.416	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024409	Gzf1	81	86.614	ENSSARG00000010285	GZF1	79	86.614	Sorex_araneus
MGP_CAROLIEiJ_G0024409	Gzf1	99	64.141	ENSSPUG00000004147	GZF1	100	67.627	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024409	Gzf1	85	45.887	ENSSPAG00000011759	GZF1	93	41.040	Stegastes_partitus
MGP_CAROLIEiJ_G0024409	Gzf1	85	75.204	ENSSSCG00000007117	GZF1	100	75.204	Sus_scrofa
MGP_CAROLIEiJ_G0024409	Gzf1	60	68.317	ENSTRUG00000006128	-	52	68.212	Takifugu_rubripes
MGP_CAROLIEiJ_G0024409	Gzf1	87	44.984	ENSTNIG00000010722	GZF1	100	44.984	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024409	Gzf1	100	76.356	ENSTTRG00000011345	GZF1	100	76.078	Tursiops_truncatus
MGP_CAROLIEiJ_G0024409	Gzf1	55	84.545	ENSUAMG00000021858	-	100	84.545	Ursus_americanus
MGP_CAROLIEiJ_G0024409	Gzf1	100	79.720	ENSUMAG00000004065	GZF1	100	79.580	Ursus_maritimus
MGP_CAROLIEiJ_G0024409	Gzf1	100	79.184	ENSVVUG00000012086	GZF1	100	79.184	Vulpes_vulpes
MGP_CAROLIEiJ_G0024409	Gzf1	99	58.956	ENSXETG00000004510	gzf1	99	58.557	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024409	Gzf1	89	46.296	ENSXMAG00000023249	GZF1	74	46.855	Xiphophorus_maculatus