EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024454 (Gene tree)
Gene ID: 110290128
Gene Symbol: Zcchc3
Alias: 2810406K24Rik
Full Name: zinc finger CCHC-type containing 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 3054 bases
Position: chr2:144287115-144290168
Accession: 110290128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0055231	zf-CCHC	PF00098.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0055231	-	3054	XM_021156612	MGP_CAROLIEiJ_P0055231	400 (aa)	XP_021012271	UPI000A3176CF

Gene Model

Click here to download MGP_CAROLIEiJ_G0024454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.444	ENSG00000247315	ZCCHC3	100	86.207	Homo_sapiens
MGP_CAROLIEiJ_G0024454	Zcchc3	67	92.537	ENSAMEG00000013999	ZCCHC3	86	92.537	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.856	ENSANAG00000013484	ZCCHC3	100	85.856	Aotus_nancymaae
MGP_CAROLIEiJ_G0024454	Zcchc3	60	32.917	ENSACLG00000026211	-	50	32.780	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024454	Zcchc3	64	32.472	ENSACLG00000024271	-	73	31.783	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024454	Zcchc3	60	30.579	ENSAMXG00000029829	-	58	30.579	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024454	Zcchc3	70	32.624	ENSAMXG00000037658	-	82	32.624	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024454	Zcchc3	59	30.638	ENSAMXG00000035044	-	65	30.638	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024454	Zcchc3	52	30.806	ENSAMXG00000033087	-	63	30.806	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.049	ENSBTAG00000002116	ZCCHC3	100	85.049	Bos_taurus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.367	ENSCJAG00000020839	ZCCHC3	100	85.714	Callithrix_jacchus
MGP_CAROLIEiJ_G0024454	Zcchc3	61	96.327	ENSCAFG00000025206	ZCCHC3	99	87.857	Canis_familiaris
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.578	ENSCAFG00020004076	ZCCHC3	100	86.275	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.843	ENSCHIG00000009882	ZCCHC3	100	85.539	Capra_hircus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	79.302	ENSCPOG00000023974	ZCCHC3	100	80.299	Cavia_porcellus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.047	ENSCCAG00000016869	ZCCHC3	100	85.012	Cebus_capucinus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.644	ENSCATG00000022200	ZCCHC3	100	85.679	Cercocebus_atys
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.911	ENSCLAG00000000269	ZCCHC3	100	85.149	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.891	ENSCSAG00000018761	ZCCHC3	100	85.926	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024454	Zcchc3	66	94.297	ENSCANG00000010812	ZCCHC3	95	94.297	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	89.851	ENSCGRG00001009163	-	100	90.099	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024454	Zcchc3	88	82.000	ENSCGRG00001011895	-	95	82.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024454	Zcchc3	88	82.000	ENSCGRG00000008273	-	95	82.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.824	ENSDNOG00000047357	ZCCHC3	100	84.804	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.759	ENSEASG00005003629	ZCCHC3	100	85.468	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.512	ENSECAG00000001035	ZCCHC3	100	85.222	Equus_caballus
MGP_CAROLIEiJ_G0024454	Zcchc3	63	35.115	ENSELUG00000017799	-	81	35.115	Esox_lucius
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.968	ENSFCAG00000026760	ZCCHC3	100	84.915	Felis_catus
MGP_CAROLIEiJ_G0024454	Zcchc3	82	96.970	ENSGGOG00000044213	ZCCHC3	100	96.970	Gorilla_gorilla
MGP_CAROLIEiJ_G0024454	Zcchc3	59	32.377	ENSHBUG00000005879	-	88	32.510	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.673	ENSHGLG00000019351	ZCCHC3	100	83.663	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024454	Zcchc3	65	85.768	ENSHGLG00100009699	ZCCHC3	83	81.250	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024454	Zcchc3	52	37.799	ENSIPUG00000000506	-	54	37.799	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.439	ENSJJAG00000020375	Zcchc3	100	82.927	Jaculus_jaculus
MGP_CAROLIEiJ_G0024454	Zcchc3	55	39.726	ENSLACG00000012216	-	70	39.726	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	53	36.667	ENSLACG00000000032	-	59	36.667	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	58	37.826	ENSLACG00000002973	-	60	37.826	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	59	38.034	ENSLACG00000002300	-	70	38.034	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	59	37.607	ENSLACG00000002864	-	78	37.607	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	59	35.593	ENSLACG00000003445	-	58	35.593	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	53	38.389	ENSLACG00000003328	-	75	38.389	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	57	40.708	ENSLACG00000022202	-	56	40.708	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	53	38.571	ENSLACG00000022551	-	54	38.571	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	58	37.931	ENSLACG00000012103	-	68	37.931	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024454	Zcchc3	56	33.186	ENSLOCG00000017623	-	90	33.186	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024454	Zcchc3	66	30.403	ENSLOCG00000000227	-	85	30.403	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024454	Zcchc3	67	91.176	ENSLAFG00000030593	ZCCHC3	100	92.647	Loxodonta_africana
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.891	ENSMFAG00000044780	ZCCHC3	100	86.173	Macaca_fascicularis
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.891	ENSMMUG00000038935	ZCCHC3	100	86.173	Macaca_mulatta
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.891	ENSMNEG00000000405	ZCCHC3	100	86.173	Macaca_nemestrina
MGP_CAROLIEiJ_G0024454	Zcchc3	55	34.234	ENSMZEG00005021211	-	59	32.906	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	50	31.707	ENSMZEG00005025869	-	51	31.163	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	64	32.171	ENSMZEG00005000499	-	73	32.171	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	54	31.532	ENSMZEG00005008237	-	62	31.532	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	57	31.169	ENSMZEG00005000211	-	56	31.169	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	50	31.707	ENSMZEG00005025868	-	51	31.163	Maylandia_zebra
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.396	ENSMICG00000031267	ZCCHC3	100	85.396	Microcebus_murinus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	91.750	ENSMOCG00000002870	Zcchc3	100	91.750	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024454	Zcchc3	59	32.911	ENSMMOG00000004516	-	71	33.333	Mola_mola
MGP_CAROLIEiJ_G0024454	Zcchc3	100	98.250	ENSMUSG00000074682	Zcchc3	100	98.250	Mus_musculus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	97.750	MGP_PahariEiJ_G0025898	Zcchc3	100	97.750	Mus_pahari
MGP_CAROLIEiJ_G0024454	Zcchc3	100	98.500	MGP_SPRETEiJ_G0025375	Zcchc3	100	98.500	Mus_spretus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.250	ENSNGAG00000006074	Zcchc3	100	84.000	Nannospalax_galili
MGP_CAROLIEiJ_G0024454	Zcchc3	50	33.171	ENSNBRG00000024091	-	56	33.171	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024454	Zcchc3	100	80.941	ENSNLEG00000009533	ZCCHC3	100	82.222	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024454	Zcchc3	100	80.825	ENSOPRG00000005081	ZCCHC3	100	81.068	Ochotona_princeps
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.744	ENSODEG00000010730	ZCCHC3	100	83.251	Octodon_degus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	79.950	ENSOCUG00000017024	ZCCHC3	100	81.188	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	82.396	ENSOGAG00000025208	ZCCHC3	100	82.885	Otolemur_garnettii
MGP_CAROLIEiJ_G0024454	Zcchc3	65	93.585	ENSOARG00000019161	ZCCHC3	100	89.726	Ovis_aries
MGP_CAROLIEiJ_G0024454	Zcchc3	65	94.340	ENSPPAG00000010453	-	100	94.340	Pan_paniscus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	81.863	ENSPPRG00000014724	ZCCHC3	100	85.539	Panthera_pardus
MGP_CAROLIEiJ_G0024454	Zcchc3	61	88.980	ENSPTIG00000009393	ZCCHC3	100	88.980	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024454	Zcchc3	100	83.578	ENSPTRG00000047645	ZCCHC3	100	85.330	Pan_troglodytes
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.891	ENSPANG00000013450	ZCCHC3	100	85.926	Papio_anubis
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.691	ENSPEMG00000009059	Zcchc3	100	85.679	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024454	Zcchc3	90	81.522	ENSPCAG00000008034	ZCCHC3	100	81.843	Procavia_capensis
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.149	ENSPCOG00000012289	ZCCHC3	100	85.149	Propithecus_coquereli
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.275	ENSPVAG00000000182	ZCCHC3	100	84.275	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	95.250	ENSRNOG00000007520	Zcchc3	100	95.250	Rattus_norvegicus
MGP_CAROLIEiJ_G0024454	Zcchc3	100	86.139	ENSRBIG00000029757	ZCCHC3	100	85.926	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024454	Zcchc3	100	86.139	ENSRROG00000005210	ZCCHC3	100	85.926	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024454	Zcchc3	100	85.222	ENSSSCG00000007211	ZCCHC3	100	84.314	Sus_scrofa
MGP_CAROLIEiJ_G0024454	Zcchc3	100	84.069	ENSTTRG00000008511	ZCCHC3	100	85.294	Tursiops_truncatus
MGP_CAROLIEiJ_G0024454	Zcchc3	98	80.451	ENSUAMG00000023407	ZCCHC3	98	80.451	Ursus_americanus
MGP_CAROLIEiJ_G0024454	Zcchc3	62	93.089	ENSVPAG00000011267	-	100	93.089	Vicugna_pacos
MGP_CAROLIEiJ_G0024454	Zcchc3	76	35.082	ENSXETG00000033341	-	94	44.295	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024454	Zcchc3	75	34.551	ENSXETG00000005590	-	100	34.884	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024454	Zcchc3	54	35.321	ENSXCOG00000010666	-	57	35.321	Xiphophorus_couchianus