EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024519 (Gene tree)
Gene ID: 110309985
Gene Symbol: Raly
Alias: Merc
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 76561 bases
Position: chr2:146728777-146805337
Accession: 110309985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0055436	RRM_1	PF00076.22	1.8e-12	1	1
MGP_CAROLIEiJ_P0055434	RRM_1	PF00076.22	3.7e-12	1	1
MGP_CAROLIEiJ_P0055433	RRM_1	PF00076.22	6.9e-12	1	1
MGP_CAROLIEiJ_P0055438	RRM_1	PF00076.22	6.9e-12	1	1
MGP_CAROLIEiJ_P0055439	RRM_1	PF00076.22	7.3e-12	1	1
MGP_CAROLIEiJ_P0055435	RRM_1	PF00076.22	7.8e-12	1	1
MGP_CAROLIEiJ_P0055437	RRM_1	PF00076.22	7.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0055440	-	1594	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0055441	-	410	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0055443	-	337	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0055435	-	1761	XM_021182718	MGP_CAROLIEiJ_P0055435	312 (aa)	XP_021038367	UPI000A316CB4
MGP_CAROLIEiJ_T0055434	-	851	-	MGP_CAROLIEiJ_P0055434	211 (aa)	-	UPI0000D77989
MGP_CAROLIEiJ_T0055437	-	1804	-	MGP_CAROLIEiJ_P0055437	312 (aa)	XP_021038367	UPI000A316CB4
MGP_CAROLIEiJ_T0055436	-	546	-	MGP_CAROLIEiJ_P0055436	141 (aa)	-	UPI0000D7798A
MGP_CAROLIEiJ_T0055433	-	1711	XM_021182732	MGP_CAROLIEiJ_P0055433	296 (aa)	XP_021038391	UPI000A31A341
MGP_CAROLIEiJ_T0055439	-	1100	-	MGP_CAROLIEiJ_P0055439	298 (aa)	-	-
MGP_CAROLIEiJ_T0055438	-	1749	XM_021182726	MGP_CAROLIEiJ_P0055438	296 (aa)	XP_021038385	UPI000A31A341

Gene Model

Click here to download MGP_CAROLIEiJ_G0024519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0024519	Raly	54	35.526	MGP_CAROLIEiJ_G0024606	Srsf6	56	35.526
MGP_CAROLIEiJ_G0024519	Raly	51	32.500	MGP_CAROLIEiJ_G0033098	Rbmx	77	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSG00000125970	RALY	100	95.506	Homo_sapiens
MGP_CAROLIEiJ_G0024519	Raly	99	74.839	ENSAPOG00000001026	raly	72	75.000	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024519	Raly	100	89.172	ENSAMEG00000009050	RALY	100	84.615	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024519	Raly	100	77.707	ENSACIG00000024288	raly	87	75.330	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024519	Raly	99	75.484	ENSAOCG00000009883	raly	65	75.000	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024519	Raly	99	76.129	ENSAPEG00000024106	raly	65	75.472	Amphiprion_percula
MGP_CAROLIEiJ_G0024519	Raly	100	78.344	ENSATEG00000004870	raly	72	74.208	Anabas_testudineus
MGP_CAROLIEiJ_G0024519	Raly	99	78.319	ENSAPLG00000012983	RALY	94	69.565	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024519	Raly	100	80.255	ENSACAG00000008983	RALY	88	67.197	Anolis_carolinensis
MGP_CAROLIEiJ_G0024519	Raly	100	96.454	ENSANAG00000019376	RALY	100	87.162	Aotus_nancymaae
MGP_CAROLIEiJ_G0024519	Raly	100	85.816	ENSACLG00000007561	raly	67	75.576	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024519	Raly	100	98.582	ENSBTAG00000016524	RALY	100	88.851	Bos_taurus
MGP_CAROLIEiJ_G0024519	Raly	100	96.454	ENSCJAG00000018361	-	100	88.514	Callithrix_jacchus
MGP_CAROLIEiJ_G0024519	Raly	100	95.035	ENSCJAG00000009449	-	100	86.824	Callithrix_jacchus
MGP_CAROLIEiJ_G0024519	Raly	100	91.189	ENSCAFG00000007490	RALY	100	87.821	Canis_familiaris
MGP_CAROLIEiJ_G0024519	Raly	100	91.630	ENSCAFG00020005069	RALY	100	88.141	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024519	Raly	100	90.749	ENSCHIG00000026609	RALY	100	88.462	Capra_hircus
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSTSYG00000002598	RALY	99	83.108	Carlito_syrichta
MGP_CAROLIEiJ_G0024519	Raly	100	90.995	ENSCAPG00000008110	RALY	100	90.995	Cavia_aperea
MGP_CAROLIEiJ_G0024519	Raly	100	98.582	ENSCPOG00000000309	RALY	100	97.630	Cavia_porcellus
MGP_CAROLIEiJ_G0024519	Raly	100	96.454	ENSCCAG00000024548	RALY	100	88.514	Cebus_capucinus
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSCATG00000031769	RALY	100	87.500	Cercocebus_atys
MGP_CAROLIEiJ_G0024519	Raly	100	98.582	ENSCLAG00000016899	RALY	100	90.909	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024519	Raly	99	87.500	ENSCSAG00000012199	RALY	100	86.032	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024519	Raly	96	83.562	ENSCHOG00000000266	RALY	97	87.168	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024519	Raly	100	79.618	ENSCPBG00000019164	RALY	100	68.562	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSCANG00000037952	RALY	100	88.851	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSCGRG00001014652	Raly	100	95.695	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSCGRG00000011726	Raly	100	95.695	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024519	Raly	57	90.000	ENSCVAG00000003556	raly	70	90.000	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024519	Raly	92	90.000	ENSDARG00000059972	raly	81	79.048	Danio_rerio
MGP_CAROLIEiJ_G0024519	Raly	100	96.454	ENSDNOG00000046782	-	100	86.824	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024519	Raly	100	90.749	ENSDNOG00000003227	-	99	85.906	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSDORG00000013400	Raly	100	96.682	Dipodomys_ordii
MGP_CAROLIEiJ_G0024519	Raly	96	77.169	ENSETEG00000012464	-	100	82.192	Echinops_telfairi
MGP_CAROLIEiJ_G0024519	Raly	100	73.885	ENSETEG00000001919	-	63	76.562	Echinops_telfairi
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSEASG00005008501	RALY	100	87.838	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSECAG00000030217	-	100	87.179	Equus_caballus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSECAG00000012357	RALY	100	87.179	Equus_caballus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSECAG00000037642	-	100	87.179	Equus_caballus
MGP_CAROLIEiJ_G0024519	Raly	99	78.761	ENSEEUG00000005356	RALY	100	72.756	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024519	Raly	94	81.407	ENSELUG00000011138	raly	78	73.276	Esox_lucius
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSFCAG00000025252	RALY	100	88.141	Felis_catus
MGP_CAROLIEiJ_G0024519	Raly	100	97.872	ENSFDAG00000010175	RALY	100	98.824	Fukomys_damarensis
MGP_CAROLIEiJ_G0024519	Raly	100	76.433	ENSFHEG00000018618	raly	82	75.926	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024519	Raly	100	62.420	ENSGMOG00000012589	raly	99	58.371	Gadus_morhua
MGP_CAROLIEiJ_G0024519	Raly	100	80.255	ENSGALG00000033696	RALY	100	69.649	Gallus_gallus
MGP_CAROLIEiJ_G0024519	Raly	100	72.611	ENSGACG00000003636	raly	81	68.584	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024519	Raly	100	78.981	ENSGAGG00000016266	RALY	83	68.562	Gopherus_agassizii
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSGGOG00000022709	RALY	100	85.473	Gorilla_gorilla
MGP_CAROLIEiJ_G0024519	Raly	100	86.525	ENSHBUG00000021321	raly	67	77.778	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024519	Raly	100	91.489	ENSHGLG00000021175	-	100	83.108	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024519	Raly	100	97.872	ENSHGLG00000017779	-	100	96.209	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024519	Raly	100	97.872	ENSHGLG00100003933	RALY	100	97.872	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024519	Raly	100	78.673	ENSHGLG00100003829	-	100	70.270	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024519	Raly	99	78.095	ENSHGLG00100000278	-	100	65.878	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024519	Raly	100	62.338	ENSHCOG00000012268	raly	91	54.425	Hippocampus_comes
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSSTOG00000008810	RALY	100	88.462	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024519	Raly	100	97.872	ENSJJAG00000008473	Raly	100	97.872	Jaculus_jaculus
MGP_CAROLIEiJ_G0024519	Raly	97	75.122	ENSKMAG00000015656	raly	83	75.122	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024519	Raly	100	77.070	ENSLBEG00000022656	raly	85	72.768	Labrus_bergylta
MGP_CAROLIEiJ_G0024519	Raly	60	92.941	ENSLBEG00000028617	raly	93	92.941	Labrus_bergylta
MGP_CAROLIEiJ_G0024519	Raly	100	75.796	ENSLACG00000008596	RALY	78	78.475	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024519	Raly	100	78.344	ENSLOCG00000007219	raly	79	80.269	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024519	Raly	100	89.172	ENSLAFG00000000321	RALY	100	86.262	Loxodonta_africana
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSMFAG00000033131	RALY	100	88.514	Macaca_fascicularis
MGP_CAROLIEiJ_G0024519	Raly	100	85.987	ENSMMUG00000018093	RALY	100	86.538	Macaca_mulatta
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSMNEG00000044988	RALY	100	87.500	Macaca_nemestrina
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSMLEG00000028900	RALY	100	88.176	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024519	Raly	100	86.525	ENSMAMG00000012529	raly	62	78.049	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024519	Raly	100	85.816	ENSMZEG00005016550	raly	64	78.283	Maylandia_zebra
MGP_CAROLIEiJ_G0024519	Raly	100	80.255	ENSMGAG00000002214	RALY	100	70.607	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSMAUG00000005739	Raly	100	99.526	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024519	Raly	100	98.582	ENSMICG00000039074	RALY	100	87.838	Microcebus_murinus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSMOCG00000009450	Raly	100	95.033	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024519	Raly	100	76.433	ENSMMOG00000013788	raly	86	75.556	Mola_mola
MGP_CAROLIEiJ_G0024519	Raly	100	75.904	ENSMODG00000002819	-	100	61.059	Monodelphis_domestica
MGP_CAROLIEiJ_G0024519	Raly	100	77.707	ENSMALG00000007071	raly	55	76.852	Monopterus_albus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSMUSG00000027593	Raly	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	MGP_PahariEiJ_G0025963	Raly	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	MGP_SPRETEiJ_G0025441	Raly	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0024519	Raly	100	91.189	ENSMPUG00000017820	RALY	100	88.141	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024519	Raly	99	82.143	ENSMLUG00000027895	-	98	79.808	Myotis_lucifugus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSMLUG00000005330	-	100	87.500	Myotis_lucifugus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSNGAG00000001263	Raly	100	99.052	Nannospalax_galili
MGP_CAROLIEiJ_G0024519	Raly	100	87.234	ENSNBRG00000014761	raly	67	78.283	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024519	Raly	87	72.426	ENSNLEG00000010031	-	86	75.875	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024519	Raly	100	87.261	ENSOPRG00000008423	RALY	100	84.936	Ochotona_princeps
MGP_CAROLIEiJ_G0024519	Raly	100	82.270	ENSODEG00000012831	-	100	84.772	Octodon_degus
MGP_CAROLIEiJ_G0024519	Raly	100	90.260	ENSODEG00000008369	-	100	82.372	Octodon_degus
MGP_CAROLIEiJ_G0024519	Raly	84	81.461	ENSODEG00000011160	-	100	71.375	Octodon_degus
MGP_CAROLIEiJ_G0024519	Raly	100	77.070	ENSONIG00000004416	raly	75	75.576	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024519	Raly	100	87.898	ENSOCUG00000000477	RALY	86	87.107	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024519	Raly	100	87.898	ENSOGAG00000032337	RALY	100	82.051	Otolemur_garnettii
MGP_CAROLIEiJ_G0024519	Raly	100	90.749	ENSOARG00000008957	RALY	100	88.141	Ovis_aries
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSPPAG00000034951	RALY	100	86.486	Pan_paniscus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSPPRG00000014593	RALY	100	89.865	Panthera_pardus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSPTIG00000021910	RALY	100	89.865	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSPTRG00000013410	RALY	100	87.500	Pan_troglodytes
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSPANG00000018093	RALY	100	87.838	Papio_anubis
MGP_CAROLIEiJ_G0024519	Raly	100	78.981	ENSPKIG00000004894	raly	77	78.899	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024519	Raly	79	91.964	ENSPSIG00000017714	RALY	96	59.677	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024519	Raly	72	83.333	ENSPMGG00000007007	raly	94	83.333	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSPEMG00000021466	Raly	100	92.632	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024519	Raly	100	80.255	ENSPCIG00000011153	-	100	65.385	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024519	Raly	63	69.663	ENSPCIG00000014019	-	100	69.663	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024519	Raly	100	86.624	ENSPPYG00000010932	RALY	100	84.936	Pongo_abelii
MGP_CAROLIEiJ_G0024519	Raly	99	84.071	ENSPCAG00000016867	RALY	99	80.602	Procavia_capensis
MGP_CAROLIEiJ_G0024519	Raly	100	97.872	ENSPCOG00000016363	RALY	100	87.500	Propithecus_coquereli
MGP_CAROLIEiJ_G0024519	Raly	100	90.749	ENSPVAG00000015827	RALY	100	87.179	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024519	Raly	100	85.106	ENSPNYG00000011247	raly	64	78.283	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024519	Raly	100	77.707	ENSPNAG00000011812	raly	79	77.578	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024519	Raly	100	100.000	ENSRNOG00000017405	Raly	100	93.243	Rattus_norvegicus
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSRBIG00000030203	RALY	100	89.632	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024519	Raly	100	95.745	ENSRROG00000038781	RALY	100	89.298	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024519	Raly	100	96.454	ENSSBOG00000001418	RALY	100	89.189	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024519	Raly	100	88.652	ENSSHAG00000016830	RALY	100	62.903	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024519	Raly	100	76.433	ENSSFOG00015012304	raly	81	79.358	Scleropages_formosus
MGP_CAROLIEiJ_G0024519	Raly	100	74.522	ENSSMAG00000001107	raly	73	73.182	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024519	Raly	100	77.707	ENSSDUG00000002411	raly	73	76.498	Seriola_dumerili
MGP_CAROLIEiJ_G0024519	Raly	55	93.506	ENSSLDG00000004903	RALY	77	93.506	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024519	Raly	100	77.707	ENSSLDG00000017872	raly	71	77.570	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024519	Raly	96	77.626	ENSSARG00000002763	-	100	65.705	Sorex_araneus
MGP_CAROLIEiJ_G0024519	Raly	100	80.255	ENSSPUG00000006251	RALY	84	85.780	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024519	Raly	81	77.692	ENSSPAG00000022480	-	76	74.359	Stegastes_partitus
MGP_CAROLIEiJ_G0024519	Raly	100	98.582	ENSSSCG00000007275	RALY	100	86.817	Sus_scrofa
MGP_CAROLIEiJ_G0024519	Raly	100	78.981	ENSTGUG00000003715	RALY	100	86.574	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024519	Raly	100	78.855	ENSTBEG00000009812	RALY	100	75.399	Tupaia_belangeri
MGP_CAROLIEiJ_G0024519	Raly	100	89.474	ENSTTRG00000006590	RALY	100	85.304	Tursiops_truncatus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSUAMG00000006993	RALY	99	87.762	Ursus_americanus
MGP_CAROLIEiJ_G0024519	Raly	100	99.291	ENSUMAG00000024106	RALY	100	88.141	Ursus_maritimus
MGP_CAROLIEiJ_G0024519	Raly	100	87.261	ENSVPAG00000000373	RALY	76	96.226	Vicugna_pacos
MGP_CAROLIEiJ_G0024519	Raly	100	91.630	ENSVVUG00000004546	RALY	100	88.141	Vulpes_vulpes
MGP_CAROLIEiJ_G0024519	Raly	100	72.941	ENSXETG00000019514	raly	79	73.799	Xenopus_tropicalis