EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024540 (Gene tree)
Gene ID: 110290548
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 7394 bases
Position: chr2:147786623-147794016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0055544	FAM83	PF07894.12	5.7e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0055544	-	3956	-	MGP_CAROLIEiJ_P0055544	776 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024540	-	95	79.189	ENSG00000125998	FAM83C	99	79.189	Homo_sapiens
MGP_CAROLIEiJ_G0024540	-	95	78.049	ENSAMEG00000009786	FAM83C	99	78.049	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024540	-	77	44.792	ENSAPLG00000007684	FAM83C	76	61.639	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSANAG00000024148	FAM83C	99	79.054	Aotus_nancymaae
MGP_CAROLIEiJ_G0024540	-	94	75.341	ENSBTAG00000006278	FAM83C	100	75.341	Bos_taurus
MGP_CAROLIEiJ_G0024540	-	95	78.919	ENSCJAG00000017842	FAM83C	99	78.919	Callithrix_jacchus
MGP_CAROLIEiJ_G0024540	-	95	76.287	ENSCAFG00000008011	FAM83C	99	76.287	Canis_familiaris
MGP_CAROLIEiJ_G0024540	-	97	74.934	ENSCAFG00020005360	FAM83C	99	74.934	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024540	-	94	74.659	ENSCHIG00000020912	FAM83C	100	74.659	Capra_hircus
MGP_CAROLIEiJ_G0024540	-	95	78.184	ENSTSYG00000036093	FAM83C	99	78.184	Carlito_syrichta
MGP_CAROLIEiJ_G0024540	-	99	71.649	ENSCAPG00000016579	FAM83C	99	72.036	Cavia_aperea
MGP_CAROLIEiJ_G0024540	-	99	74.356	ENSCPOG00000027379	FAM83C	99	74.742	Cavia_porcellus
MGP_CAROLIEiJ_G0024540	-	95	78.167	ENSCCAG00000025013	FAM83C	99	78.302	Cebus_capucinus
MGP_CAROLIEiJ_G0024540	-	95	78.919	ENSCATG00000045115	FAM83C	99	78.919	Cercocebus_atys
MGP_CAROLIEiJ_G0024540	-	94	78.338	ENSCLAG00000016840	FAM83C	99	78.255	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSCSAG00000010439	FAM83C	99	79.054	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024540	-	69	53.012	ENSCPBG00000002041	FAM83C	67	53.012	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024540	-	95	78.649	ENSCANG00000039615	FAM83C	99	78.649	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024540	-	99	88.774	ENSCGRG00001009663	Fam83c	99	88.774	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024540	-	99	88.774	ENSCGRG00000017631	Fam83c	99	88.774	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024540	-	94	74.255	ENSDNOG00000034661	FAM83C	98	74.290	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024540	-	99	75.835	ENSDORG00000001424	Fam83c	99	75.835	Dipodomys_ordii
MGP_CAROLIEiJ_G0024540	-	52	82.310	ENSETEG00000000068	-	56	80.235	Echinops_telfairi
MGP_CAROLIEiJ_G0024540	-	99	77.022	ENSEASG00005005839	FAM83C	99	77.022	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024540	-	99	77.022	ENSECAG00000010974	FAM83C	99	77.022	Equus_caballus
MGP_CAROLIEiJ_G0024540	-	97	76.291	ENSFCAG00000006431	FAM83C	99	76.291	Felis_catus
MGP_CAROLIEiJ_G0024540	-	94	76.630	ENSFDAG00000020451	FAM83C	100	75.613	Fukomys_damarensis
MGP_CAROLIEiJ_G0024540	-	56	48.684	ENSGAGG00000011761	FAM83C	76	49.119	Gopherus_agassizii
MGP_CAROLIEiJ_G0024540	-	94	78.349	ENSGGOG00000012107	FAM83C	99	78.378	Gorilla_gorilla
MGP_CAROLIEiJ_G0024540	-	99	75.416	ENSHGLG00000006814	FAM83C	99	75.416	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024540	-	99	74.392	ENSHGLG00100018815	FAM83C	99	74.392	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024540	-	53	48.580	ENSHCOG00000014079	fam83c	63	48.580	Hippocampus_comes
MGP_CAROLIEiJ_G0024540	-	95	80.189	ENSSTOG00000019705	FAM83C	99	80.189	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024540	-	96	79.867	ENSJJAG00000013689	Fam83c	98	79.867	Jaculus_jaculus
MGP_CAROLIEiJ_G0024540	-	95	75.474	ENSLAFG00000029152	FAM83C	99	75.610	Loxodonta_africana
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSMFAG00000038878	FAM83C	99	79.054	Macaca_fascicularis
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSMMUG00000018210	FAM83C	99	79.054	Macaca_mulatta
MGP_CAROLIEiJ_G0024540	-	95	78.919	ENSMNEG00000028152	FAM83C	99	78.919	Macaca_nemestrina
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSMLEG00000004620	FAM83C	99	79.054	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024540	-	96	89.960	ENSMAUG00000011286	Fam83c	99	89.960	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024540	-	97	77.351	ENSMICG00000013976	FAM83C	99	77.351	Microcebus_murinus
MGP_CAROLIEiJ_G0024540	-	96	91.153	ENSMOCG00000016691	Fam83c	100	91.153	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024540	-	94	55.619	ENSMODG00000019691	FAM83C	99	54.847	Monodelphis_domestica
MGP_CAROLIEiJ_G0024540	-	100	97.552	ENSMUSG00000074647	Fam83c	100	97.552	Mus_musculus
MGP_CAROLIEiJ_G0024540	-	100	94.852	MGP_PahariEiJ_G0025985	Fam83c	100	94.852	Mus_pahari
MGP_CAROLIEiJ_G0024540	-	100	97.036	MGP_SPRETEiJ_G0025462	Fam83c	100	97.036	Mus_spretus
MGP_CAROLIEiJ_G0024540	-	95	78.591	ENSMPUG00000017801	FAM83C	99	78.591	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024540	-	94	79.484	ENSMLUG00000004473	FAM83C	99	78.278	Myotis_lucifugus
MGP_CAROLIEiJ_G0024540	-	95	84.934	ENSNGAG00000010632	Fam83c	96	84.934	Nannospalax_galili
MGP_CAROLIEiJ_G0024540	-	94	79.404	ENSNLEG00000010219	FAM83C	99	78.307	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024540	-	92	56.854	ENSMEUG00000007181	FAM83C	99	53.469	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024540	-	94	76.081	ENSOPRG00000005474	FAM83C	99	76.081	Ochotona_princeps
MGP_CAROLIEiJ_G0024540	-	94	78.155	ENSOCUG00000000488	FAM83C	99	78.562	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024540	-	94	78.320	ENSOGAG00000001833	FAM83C	99	78.320	Otolemur_garnettii
MGP_CAROLIEiJ_G0024540	-	95	73.289	ENSOARG00000012242	FAM83C	99	73.289	Ovis_aries
MGP_CAROLIEiJ_G0024540	-	95	79.324	ENSPPAG00000037890	FAM83C	99	79.324	Pan_paniscus
MGP_CAROLIEiJ_G0024540	-	97	76.159	ENSPPRG00000006244	FAM83C	99	76.159	Panthera_pardus
MGP_CAROLIEiJ_G0024540	-	97	72.185	ENSPTIG00000020766	FAM83C	99	72.185	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024540	-	95	79.189	ENSPTRG00000013437	FAM83C	99	79.189	Pan_troglodytes
MGP_CAROLIEiJ_G0024540	-	95	79.324	ENSPANG00000009736	FAM83C	99	79.324	Papio_anubis
MGP_CAROLIEiJ_G0024540	-	99	90.360	ENSPEMG00000021622	Fam83c	99	90.360	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024540	-	94	54.467	ENSPCIG00000027973	FAM83C	99	53.735	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024540	-	94	78.755	ENSPPYG00000010950	FAM83C	99	78.784	Pongo_abelii
MGP_CAROLIEiJ_G0024540	-	94	74.797	ENSPCAG00000003794	FAM83C	99	73.712	Procavia_capensis
MGP_CAROLIEiJ_G0024540	-	94	78.969	ENSPCOG00000022524	FAM83C	99	77.881	Propithecus_coquereli
MGP_CAROLIEiJ_G0024540	-	95	74.390	ENSPVAG00000010434	FAM83C	99	74.390	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024540	-	100	92.278	ENSRNOG00000046772	Fam83c	100	92.278	Rattus_norvegicus
MGP_CAROLIEiJ_G0024540	-	95	79.054	ENSRBIG00000040153	FAM83C	99	79.054	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024540	-	95	78.919	ENSRROG00000040897	FAM83C	99	78.919	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024540	-	95	79.595	ENSSBOG00000025721	FAM83C	99	79.595	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024540	-	94	56.863	ENSSHAG00000018354	FAM83C	99	53.464	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024540	-	81	87.013	ENSSARG00000000723	FAM83C	86	86.335	Sorex_araneus
MGP_CAROLIEiJ_G0024540	-	89	52.273	ENSSPUG00000012470	FAM83C	97	52.273	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024540	-	94	77.248	ENSSSCG00000028858	FAM83C	100	77.520	Sus_scrofa
MGP_CAROLIEiJ_G0024540	-	82	81.366	ENSTBEG00000008768	FAM83C	85	80.124	Tupaia_belangeri
MGP_CAROLIEiJ_G0024540	-	88	72.807	ENSTTRG00000017014	FAM83C	99	72.807	Tursiops_truncatus
MGP_CAROLIEiJ_G0024540	-	98	75.785	ENSUAMG00000007959	FAM83C	99	75.785	Ursus_americanus
MGP_CAROLIEiJ_G0024540	-	99	75.000	ENSUMAG00000005095	FAM83C	99	75.000	Ursus_maritimus
MGP_CAROLIEiJ_G0024540	-	97	75.328	ENSVVUG00000003966	FAM83C	99	75.328	Vulpes_vulpes
MGP_CAROLIEiJ_G0024540	-	63	40.119	ENSXETG00000019789	fam83c	81	50.456	Xenopus_tropicalis