EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024551 (Gene tree)
Gene ID: 110310310
Gene Symbol: Rbm12
Alias: 5730420G12Rik|9430070C08Rik|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 20396 bases
Position: chr2:148057823-148078218
Accession: 110310310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0055633	RRM_1	PF00076.22	5.8e-29	1	3
MGP_CAROLIEiJ_P0055633	RRM_1	PF00076.22	5.8e-29	2	3
MGP_CAROLIEiJ_P0055633	RRM_1	PF00076.22	5.8e-29	3	3
MGP_CAROLIEiJ_P0055634	RRM_1	PF00076.22	5.8e-29	1	3
MGP_CAROLIEiJ_P0055634	RRM_1	PF00076.22	5.8e-29	2	3
MGP_CAROLIEiJ_P0055634	RRM_1	PF00076.22	5.8e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0055633	-	6684	-	MGP_CAROLIEiJ_P0055633	1007 (aa)	XP_021038803	UPI000A3161A3
MGP_CAROLIEiJ_T0055637	-	561	-	MGP_CAROLIEiJ_P0055637	133 (aa)	-	-
MGP_CAROLIEiJ_T0055636	-	575	-	MGP_CAROLIEiJ_P0055636	143 (aa)	-	-
MGP_CAROLIEiJ_T0055635	-	1059	-	MGP_CAROLIEiJ_P0055635	288 (aa)	-	-
MGP_CAROLIEiJ_T0055634	-	6716	-	MGP_CAROLIEiJ_P0055634	1007 (aa)	XP_021038803	UPI000A3161A3

Gene Model

Click here to download MGP_CAROLIEiJ_G0024551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.295	ENSG00000244462	RBM12	100	98.601	Homo_sapiens
MGP_CAROLIEiJ_G0024551	Rbm12	96	95.075	ENSAMEG00000019189	RBM12	75	94.493	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024551	Rbm12	88	81.707	ENSACAG00000006330	RBM12	98	81.707	Anolis_carolinensis
MGP_CAROLIEiJ_G0024551	Rbm12	99	92.867	ENSANAG00000032596	RBM12	98	77.028	Aotus_nancymaae
MGP_CAROLIEiJ_G0024551	Rbm12	100	86.224	ENSBTAG00000044015	RBM12	100	86.918	Bos_taurus
MGP_CAROLIEiJ_G0024551	Rbm12	88	96.018	ENSCAFG00000008256	RBM12	98	96.018	Canis_familiaris
MGP_CAROLIEiJ_G0024551	Rbm12	88	95.897	ENSCAFG00020005650	RBM12	75	94.638	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024551	Rbm12	98	92.960	ENSCHIG00000024592	RBM12	75	93.074	Capra_hircus
MGP_CAROLIEiJ_G0024551	Rbm12	94	93.979	ENSTSYG00000030563	RBM12	98	93.979	Carlito_syrichta
MGP_CAROLIEiJ_G0024551	Rbm12	86	88.051	ENSCAPG00000006176	RBM12	96	87.326	Cavia_aperea
MGP_CAROLIEiJ_G0024551	Rbm12	100	88.055	ENSCPOG00000035170	RBM12	100	87.660	Cavia_porcellus
MGP_CAROLIEiJ_G0024551	Rbm12	96	89.717	ENSCCAG00000036056	-	98	75.615	Cebus_capucinus
MGP_CAROLIEiJ_G0024551	Rbm12	86	89.362	ENSCCAG00000035899	-	100	89.617	Cebus_capucinus
MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	ENSCATG00000030934	RBM12	98	77.483	Cercocebus_atys
MGP_CAROLIEiJ_G0024551	Rbm12	100	91.226	ENSCLAG00000017230	RBM12	100	87.885	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	ENSCANG00000030552	RBM12	98	77.483	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.240	ENSCGRG00001021144	Rbm12	100	93.942	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.240	ENSCGRG00000012719	Rbm12	100	93.942	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024551	Rbm12	97	93.333	ENSDORG00000028509	-	100	88.020	Dipodomys_ordii
MGP_CAROLIEiJ_G0024551	Rbm12	100	82.044	ENSDORG00000000606	-	100	81.746	Dipodomys_ordii
MGP_CAROLIEiJ_G0024551	Rbm12	100	93.438	ENSECAG00000021997	RBM12	76	91.123	Equus_caballus
MGP_CAROLIEiJ_G0024551	Rbm12	59	96.237	ENSEEUG00000008858	-	56	96.237	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024551	Rbm12	99	92.493	ENSFDAG00000014663	RBM12	100	77.789	Fukomys_damarensis
MGP_CAROLIEiJ_G0024551	Rbm12	95	78.338	ENSGALG00000030253	RBM12	100	85.407	Gallus_gallus
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSGGOG00000028500	RBM12	98	77.581	Gorilla_gorilla
MGP_CAROLIEiJ_G0024551	Rbm12	99	93.343	ENSHGLG00000013208	RBM12	100	87.611	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024551	Rbm12	82	95.768	ENSHGLG00100019158	RBM12	88	95.768	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024551	Rbm12	100	84.806	ENSSTOG00000019739	RBM12	100	85.204	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024551	Rbm12	96	75.882	ENSJJAG00000009879	-	55	86.735	Jaculus_jaculus
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.113	ENSLAFG00000010341	RBM12	100	77.193	Loxodonta_africana
MGP_CAROLIEiJ_G0024551	Rbm12	99	92.493	ENSMFAG00000032583	RBM12	98	77.202	Macaca_fascicularis
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSMMUG00000020960	CPNE1	100	77.581	Macaca_mulatta
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSMNEG00000045365	RBM12	98	77.581	Macaca_nemestrina
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSMLEG00000032492	RBM12	98	77.581	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024551	Rbm12	96	78.883	ENSMGAG00000001502	RBM12	100	85.714	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.935	ENSMAUG00000012800	Rbm12	100	94.638	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024551	Rbm12	97	82.686	ENSMICG00000029540	-	95	87.634	Microcebus_murinus
MGP_CAROLIEiJ_G0024551	Rbm12	90	94.127	ENSMICG00000032761	-	98	93.333	Microcebus_murinus
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.737	ENSMOCG00000012950	Rbm12	100	94.240	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024551	Rbm12	95	83.956	ENSMODG00000001591	RBM12	98	89.634	Monodelphis_domestica
MGP_CAROLIEiJ_G0024551	Rbm12	100	97.319	ENSMUSG00000089824	Rbm12	100	97.319	Mus_musculus
MGP_CAROLIEiJ_G0024551	Rbm12	100	98.123	MGP_PahariEiJ_G0025996	Rbm12	100	98.123	Mus_pahari
MGP_CAROLIEiJ_G0024551	Rbm12	100	98.411	MGP_SPRETEiJ_G0025473	Rbm12	100	98.411	Mus_spretus
MGP_CAROLIEiJ_G0024551	Rbm12	97	93.642	ENSMPUG00000017789	-	75	91.123	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024551	Rbm12	100	93.295	ENSMLUG00000011217	RBM12	98	78.381	Myotis_lucifugus
MGP_CAROLIEiJ_G0024551	Rbm12	100	92.751	ENSNGAG00000015846	Rbm12	100	91.857	Nannospalax_galili
MGP_CAROLIEiJ_G0024551	Rbm12	100	92.776	ENSNLEG00000010268	RBM12	98	77.299	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024551	Rbm12	95	84.052	ENSMEUG00000007621	RBM12	74	86.967	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024551	Rbm12	100	90.014	ENSOPRG00000005687	RBM12	100	84.440	Ochotona_princeps
MGP_CAROLIEiJ_G0024551	Rbm12	100	84.825	ENSODEG00000013870	RBM12	100	84.922	Octodon_degus
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.295	ENSPPAG00000040719	RBM12	98	77.778	Pan_paniscus
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.295	ENSPTRG00000013446	RBM12	98	77.778	Pan_troglodytes
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.295	ENSPTRG00000040708	-	98	77.778	Pan_troglodytes
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSPANG00000020003	CPNE1	98	77.581	Papio_anubis
MGP_CAROLIEiJ_G0024551	Rbm12	81	85.077	ENSPSIG00000007369	RBM12	98	85.077	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024551	Rbm12	100	96.226	ENSPEMG00000017769	Rbm12	100	96.226	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024551	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	92	78.873	Poecilia_formosa
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.153	ENSPPYG00000010960	RBM12	100	77.126	Pongo_abelii
MGP_CAROLIEiJ_G0024551	Rbm12	95	92.052	ENSPCAG00000008653	RBM12	100	75.902	Procavia_capensis
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.534	ENSPCOG00000023724	RBM12	73	93.768	Propithecus_coquereli
MGP_CAROLIEiJ_G0024551	Rbm12	84	93.153	ENSPVAG00000014937	RBM12	100	78.578	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.283	ENSRNOG00000049913	LOC100910990	100	92.442	Rattus_norvegicus
MGP_CAROLIEiJ_G0024551	Rbm12	100	94.283	ENSRNOG00000019723	Rbm12	100	92.442	Rattus_norvegicus
MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	ENSRBIG00000042965	RBM12	98	77.483	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	ENSRROG00000037485	RBM12	98	77.483	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	ENSSBOG00000027633	RBM12	98	77.224	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024551	Rbm12	95	84.052	ENSSHAG00000018585	RBM12	100	89.634	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024551	Rbm12	100	93.249	ENSSSCG00000036156	RBM12	100	86.819	Sus_scrofa
MGP_CAROLIEiJ_G0024551	Rbm12	90	85.692	ENSTGUG00000003002	RBM12	100	85.213	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024551	Rbm12	100	93.153	ENSTTRG00000017035	RBM12	100	77.322	Tursiops_truncatus
MGP_CAROLIEiJ_G0024551	Rbm12	96	94.651	ENSUAMG00000010430	RBM12	100	77.517	Ursus_americanus
MGP_CAROLIEiJ_G0024551	Rbm12	87	100.000	ENSVPAG00000003812	RBM12	89	100.000	Vicugna_pacos
MGP_CAROLIEiJ_G0024551	Rbm12	89	63.716	ENSXETG00000033541	RBM12	72	62.291	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024551	Rbm12	95	47.347	ENSXCOG00000014073	rbm12	60	78.205	Xiphophorus_couchianus