EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024606 (Gene tree)
Gene ID
110285043
Gene Symbol
Srsf6
Alias
1210001E11Rik|Sfrs6
Full Name
serine and arginine rich splicing factor 6
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
5365 bases
Position
chr2:154759664-154765028
Accession
110285043
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0055924RRM_1PF00076.228.1e-3212
MGP_CAROLIEiJ_P0055924RRM_1PF00076.228.1e-3222
MGP_CAROLIEiJ_P0055926RRM_1PF00076.222e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0055926-515-MGP_CAROLIEiJ_P0055926135 (aa)-UPI00001CF3B4
MGP_CAROLIEiJ_T0055925-1666-MGP_CAROLIEiJ_P0055925135 (aa)-UPI00001CF3B4
MGP_CAROLIEiJ_T0055924-3514XM_021151078MGP_CAROLIEiJ_P0055924339 (aa)XP_021006737UPI000A317714
MGP_CAROLIEiJ_T0055923-2896--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0024606's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024606's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0024606Srsf65635.526MGP_CAROLIEiJ_G0024519Raly5435.526
MGP_CAROLIEiJ_G0024606Srsf65634.667MGP_CAROLIEiJ_G0022516-5234.667
MGP_CAROLIEiJ_G0024606Srsf65335.443MGP_CAROLIEiJ_G0033098Rbmx7735.443
MGP_CAROLIEiJ_G0024606Srsf65840.670MGP_CAROLIEiJ_G0016943Srsf18242.857
MGP_CAROLIEiJ_G0024606Srsf66131.868MGP_CAROLIEiJ_G0015568Cirbp8431.868
MGP_CAROLIEiJ_G0024606Srsf65147.297MGP_CAROLIEiJ_G0027622Srsf97038.674
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSG00000124193SRSF610098.519Homo_sapiens
MGP_CAROLIEiJ_G0024606Srsf65893.590ENSAPOG00000016635-8481.618Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024606Srsf69584.877ENSAMEG00000003710SRSF69484.877Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024606Srsf68768.581ENSACIG00000023658-5687.778Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024606Srsf66387.059ENSACIG00000020091-9580.315Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024606Srsf69267.939ENSAOCG00000019438-9867.939Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024606Srsf66582.955ENSAOCG00000004309-5783.152Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024606Srsf69861.871ENSAPEG00000013086-5388.172Amphiprion_percula
MGP_CAROLIEiJ_G0024606Srsf66683.146ENSATEG00000007255-5480.978Anabas_testudineus
MGP_CAROLIEiJ_G0024606Srsf610082.029ENSACAG00000002061SRSF69883.188Anolis_carolinensis
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSANAG00000024080SRSF610098.519Aotus_nancymaae
MGP_CAROLIEiJ_G0024606Srsf65489.041ENSACLG00000024373-9679.570Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024606Srsf65590.541ENSAMXG00000003101-5184.737Astyanax_mexicanus
MGP_CAROLIEiJ_G0024606Srsf65591.892ENSAMXG00000042692-9678.519Astyanax_mexicanus
MGP_CAROLIEiJ_G0024606Srsf610099.259ENSBTAG00000008527SRSF610099.259Bos_taurus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSCJAG00000048403SRSF610098.519Callithrix_jacchus
MGP_CAROLIEiJ_G0024606Srsf610099.259ENSCAFG00000009289SRSF610099.259Canis_familiaris
MGP_CAROLIEiJ_G0024606Srsf610099.259ENSCAFG00020013559SRSF610099.259Canis_lupus_dingo
MGP_CAROLIEiJ_G0024606Srsf69595.988ENSCHIG00000009148-9495.988Capra_hircus
MGP_CAROLIEiJ_G0024606Srsf610099.259ENSCHIG00000015890-10099.259Capra_hircus
MGP_CAROLIEiJ_G0024606Srsf69480.124ENSTSYG00000026476SRSF69377.778Carlito_syrichta
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSCPOG00000011761SRSF610098.519Cavia_porcellus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSCCAG00000026018-10098.519Cebus_capucinus
MGP_CAROLIEiJ_G0024606Srsf69565.432ENSCCAG00000018540-6287.234Cebus_capucinus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSCATG00000030794SRSF610098.519Cercocebus_atys
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSCLAG00000010247SRSF610098.519Chinchilla_lanigera
MGP_CAROLIEiJ_G0024606Srsf69996.746ENSCSAG00000014022SRSF69996.746Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024606Srsf67997.222ENSCHOG00000000561SRSF67797.222Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024606Srsf65894.872ENSCPBG00000018200SRSF69484.404Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024606Srsf69996.450ENSCANG00000037774-9996.450Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024606Srsf69581.988ENSCANG00000042529-9379.503Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024606Srsf6100100.000ENSCGRG00001022339Srsf6100100.000Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024606Srsf66298.571ENSCGRG00000006618Srsf610098.571Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024606Srsf65893.590ENSCSEG00000019778SRSF69084.252Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSCVAG00000001863SRSF69585.039Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024606Srsf65590.541ENSDARG00000016783srsf6b8789.157Danio_rerio
MGP_CAROLIEiJ_G0024606Srsf69595.370ENSDNOG00000008410SRSF69495.370Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSDORG00000028378Srsf610098.519Dipodomys_ordii
MGP_CAROLIEiJ_G0024606Srsf69491.562ENSETEG00000006221SRSF69489.198Echinops_telfairi
MGP_CAROLIEiJ_G0024606Srsf65898.718ENSEASG00005023429SRSF69495.679Equus_asinus_asinus
MGP_CAROLIEiJ_G0024606Srsf65898.718ENSECAG00000023932SRSF69495.679Equus_caballus
MGP_CAROLIEiJ_G0024606Srsf65792.308ENSEEUG00000002324SRSF69092.386Erinaceus_europaeus
MGP_CAROLIEiJ_G0024606Srsf67377.778ENSELUG00000013506SRSF68877.778Esox_lucius
MGP_CAROLIEiJ_G0024606Srsf69859.286ENSELUG00000024182SRSF68587.356Esox_lucius
MGP_CAROLIEiJ_G0024606Srsf69596.285ENSFCAG00000032814SRSF69496.285Felis_catus
MGP_CAROLIEiJ_G0024606Srsf69580.247ENSFDAG00000012191SRSF69377.778Fukomys_damarensis
MGP_CAROLIEiJ_G0024606Srsf68871.287ENSFHEG00000023065srsf6a5587.500Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024606Srsf65688.158ENSGMOG00000014458srsf6a5277.604Gadus_morhua
MGP_CAROLIEiJ_G0024606Srsf66176.829ENSGMOG00000006105srsf6a6270.391Gadus_morhua
MGP_CAROLIEiJ_G0024606Srsf610095.556ENSGALG00000000990SRSF610095.556Gallus_gallus
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSGAFG00000019088-7282.400Gambusia_affinis
MGP_CAROLIEiJ_G0024606Srsf69861.194ENSGACG00000006084srsf6a5383.871Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024606Srsf65894.872ENSGAGG00000003238SRSF69484.404Gopherus_agassizii
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSGGOG00000009808SRSF610098.519Gorilla_gorilla
MGP_CAROLIEiJ_G0024606Srsf65689.474ENSHBUG00000006386-5883.696Haplochromis_burtoni
MGP_CAROLIEiJ_G0024606Srsf69175.728ENSHGLG00000007701-5878.610Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSHGLG00000007348SRSF610098.519Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024606Srsf69580.556ENSHGLG00100005043SRSF69378.086Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024606Srsf65887.179ENSHCOG00000002740srsf6a5782.065Hippocampus_comes
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSIPUG00000004776-7272.103Ictalurus_punctatus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSSTOG00000010866SRSF610098.519Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024606Srsf65695.812ENSJJAG00000020690Srsf69194.819Jaculus_jaculus
MGP_CAROLIEiJ_G0024606Srsf65493.151ENSKMAG00000011934srsf6a5985.870Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSLBEG00000007356srsf6a5285.484Labrus_bergylta
MGP_CAROLIEiJ_G0024606Srsf610078.125ENSLACG00000005466SRSF610075.731Latimeria_chalumnae
MGP_CAROLIEiJ_G0024606Srsf67093.305ENSLAFG00000006682SRSF68993.450Loxodonta_africana
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSMFAG00000036925SRSF610098.519Macaca_fascicularis
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSMMUG00000006742SRSF610098.519Macaca_mulatta
MGP_CAROLIEiJ_G0024606Srsf69495.938ENSMNEG00000038270-9495.963Macaca_nemestrina
MGP_CAROLIEiJ_G0024606Srsf610097.037ENSMNEG00000027392-10097.037Macaca_nemestrina
MGP_CAROLIEiJ_G0024606Srsf65796.373ENSMLEG00000031524SRSF69096.373Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024606Srsf66387.059ENSMAMG00000023477-8987.059Mastacembelus_armatus
MGP_CAROLIEiJ_G0024606Srsf69861.871ENSMAMG00000017161srsf6a5387.634Mastacembelus_armatus
MGP_CAROLIEiJ_G0024606Srsf69858.333ENSMZEG00005020658-6082.873Maylandia_zebra
MGP_CAROLIEiJ_G0024606Srsf65689.474ENSMZEG00005008032-5783.696Maylandia_zebra
MGP_CAROLIEiJ_G0024606Srsf6100100.000ENSMAUG00000019086-100100.000Mesocricetus_auratus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSMICG00000008537SRSF610098.519Microcebus_murinus
MGP_CAROLIEiJ_G0024606Srsf66298.571ENSMOCG00000018738Srsf610098.571Microtus_ochrogaster
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSMMOG00000015241-7890.361Mola_mola
MGP_CAROLIEiJ_G0024606Srsf65894.872ENSMODG00000003107SRSF69586.687Monodelphis_domestica
MGP_CAROLIEiJ_G0024606Srsf6100100.000ENSMUSG00000016921Srsf6100100.000Mus_musculus
MGP_CAROLIEiJ_G0024606Srsf6100100.000MGP_PahariEiJ_G0026050Srsf6100100.000Mus_pahari
MGP_CAROLIEiJ_G0024606Srsf6100100.000MGP_SPRETEiJ_G0025528Srsf6100100.000Mus_spretus
MGP_CAROLIEiJ_G0024606Srsf68496.516ENSMPUG00000017692SRSF69996.516Mustela_putorius_furo
MGP_CAROLIEiJ_G0024606Srsf69480.124ENSMLUG00000016618SRSF69480.247Myotis_lucifugus
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSNGAG00000017560Srsf610098.519Nannospalax_galili
MGP_CAROLIEiJ_G0024606Srsf69861.871ENSNBRG00000001846-5287.634Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024606Srsf65689.474ENSNBRG00000014709-5883.696Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSNLEG00000006524SRSF610098.519Nomascus_leucogenys
MGP_CAROLIEiJ_G0024606Srsf65894.872ENSMEUG00000014615SRSF66295.745Notamacropus_eugenii
MGP_CAROLIEiJ_G0024606Srsf67094.561ENSOPRG00000002017-8994.760Ochotona_princeps
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSODEG00000016510-10098.519Octodon_degus
MGP_CAROLIEiJ_G0024606Srsf65893.590ENSONIG00000001925-6672.766Oreochromis_niloticus
MGP_CAROLIEiJ_G0024606Srsf66186.585ENSONIG00000020247-5384.239Oreochromis_niloticus
MGP_CAROLIEiJ_G0024606Srsf69839.865ENSOCUG00000009785-6476.804Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024606Srsf67557.874ENSOCUG00000023999-7063.128Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSORLG00020017506srsf6a9069.032Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024606Srsf65897.436ENSOGAG00000014468SRSF69495.062Otolemur_garnettii
MGP_CAROLIEiJ_G0024606Srsf69492.857ENSOARG00000003117SRSF69492.901Ovis_aries
MGP_CAROLIEiJ_G0024606Srsf610095.640ENSPPAG00000034327-10095.640Pan_paniscus
MGP_CAROLIEiJ_G0024606Srsf69184.142ENSPPAG00000043131-10086.408Pan_paniscus
MGP_CAROLIEiJ_G0024606Srsf69596.285ENSPPRG00000008917SRSF69496.285Panthera_pardus
MGP_CAROLIEiJ_G0024606Srsf65794.845ENSPTIG00000019153SRSF69094.845Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024606Srsf69184.142ENSPTRG00000046274-10086.408Pan_troglodytes
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSPTRG00000044686-10098.519Pan_troglodytes
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSPANG00000035224SRSF610098.519Papio_anubis
MGP_CAROLIEiJ_G0024606Srsf65975.000ENSPKIG00000015703-9560.403Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024606Srsf65893.590ENSPKIG00000015603-8884.252Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024606Srsf69862.121ENSPKIG00000018463-8389.286Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024606Srsf69072.078ENSPMGG00000014963srsf6a5589.130Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024606Srsf68588.793ENSPEMG00000022405-9688.793Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024606Srsf610097.037ENSPCIG00000003820SRSF610097.037Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSPFOG00000006437srsf6a5083.158Poecilia_formosa
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSPLAG00000009243srsf6a8082.677Poecilia_latipinna
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSPMEG00000006042SRSF65487.027Poecilia_mexicana
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSPREG00000001040srsf6a8783.846Poecilia_reticulata
MGP_CAROLIEiJ_G0024606Srsf610095.930ENSPPYG00000011019SRSF610095.930Pongo_abelii
MGP_CAROLIEiJ_G0024606Srsf65896.154ENSPCAG00000010954SRSF69691.304Procavia_capensis
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSPCOG00000026364SRSF610098.519Propithecus_coquereli
MGP_CAROLIEiJ_G0024606Srsf69594.720ENSPVAG00000015232SRSF69494.720Pteropus_vampyrus
MGP_CAROLIEiJ_G0024606Srsf65893.590ENSPNYG00000011272-5187.634Pundamilia_nyererei
MGP_CAROLIEiJ_G0024606Srsf65689.474ENSPNYG00000004944-5883.696Pundamilia_nyererei
MGP_CAROLIEiJ_G0024606Srsf66091.358ENSPNAG00000023179-9482.677Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024606Srsf610099.705ENSRNOG00000006380Srsf610099.705Rattus_norvegicus
MGP_CAROLIEiJ_G0024606Srsf610094.815ENSRBIG00000041414SRSF610094.815Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSRROG00000029989SRSF610098.519Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024606Srsf610098.519ENSSBOG00000033708-10098.519Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024606Srsf69469.906ENSSBOG00000034078-5476.796Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024606Srsf65894.872ENSSHAG00000012805SRSF69586.687Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024606Srsf65593.243ENSSFOG00015015169SRSF66089.130Scleropages_formosus
MGP_CAROLIEiJ_G0024606Srsf69064.583ENSSFOG00015019681-5381.959Scleropages_formosus
MGP_CAROLIEiJ_G0024606Srsf65990.000ENSSMAG00000014861-9466.929Scophthalmus_maximus
MGP_CAROLIEiJ_G0024606Srsf65688.158ENSSMAG00000017447-5579.891Scophthalmus_maximus
MGP_CAROLIEiJ_G0024606Srsf69861.151ENSSDUG00000016097srsf6a5387.634Seriola_dumerili
MGP_CAROLIEiJ_G0024606Srsf66387.059ENSSDUG00000011036-9087.059Seriola_dumerili
MGP_CAROLIEiJ_G0024606Srsf66387.059ENSSLDG00000014858-9087.059Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024606Srsf69861.871ENSSLDG00000022841srsf6a5487.634Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024606Srsf610095.556ENSSPUG00000004967SRSF610095.556Sphenodon_punctatus
MGP_CAROLIEiJ_G0024606Srsf69861.871ENSSPAG00000002362srsf6a6786.243Stegastes_partitus
MGP_CAROLIEiJ_G0024606Srsf66384.706ENSSPAG00000021913-8684.706Stegastes_partitus
MGP_CAROLIEiJ_G0024606Srsf69596.296ENSSSCG00000007362SRSF69696.540Sus_scrofa
MGP_CAROLIEiJ_G0024606Srsf69483.282ENSTGUG00000003455SRSF69484.098Taeniopygia_guttata
MGP_CAROLIEiJ_G0024606Srsf65992.500ENSTRUG00000021397-8792.500Takifugu_rubripes
MGP_CAROLIEiJ_G0024606Srsf68871.096ENSTNIG00000001692srsf6a5786.022Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024606Srsf68691.724ENSTBEG00000013448SRSF69292.042Tupaia_belangeri
MGP_CAROLIEiJ_G0024606Srsf66995.319ENSTTRG00000015410SRSF68895.197Tursiops_truncatus
MGP_CAROLIEiJ_G0024606Srsf610099.259ENSUAMG00000003559SRSF610099.259Ursus_americanus
MGP_CAROLIEiJ_G0024606Srsf65794.845ENSUMAG00000001154SRSF69094.845Ursus_maritimus
MGP_CAROLIEiJ_G0024606Srsf676100.000ENSVPAG00000003016SRSF674100.000Vicugna_pacos
MGP_CAROLIEiJ_G0024606Srsf610079.259ENSVVUG00000019276-10079.259Vulpes_vulpes
MGP_CAROLIEiJ_G0024606Srsf65892.308ENSXMAG00000021849srsf6a5586.413Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us