EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024723 (Gene tree)
Gene ID
110289493
Gene Symbol
Sall4
Alias
5730441M18Rik|C330011P20Rik|Tex20
Full Name
spalt like transcription factor 4
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
20233 bases
Position
chr2:160695672-160715904
Accession
110289493
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2916
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2926
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2936
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2946
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2956
MGP_CAROLIEiJ_P0056395zf-C2H2PF00096.261.4e-2966
MGP_CAROLIEiJ_P0056398zf-C2H2PF00096.261.9e-1312
MGP_CAROLIEiJ_P0056398zf-C2H2PF00096.261.9e-1322
MGP_CAROLIEiJ_P0056397zf-C2H2PF00096.263.3e-1112
MGP_CAROLIEiJ_P0056397zf-C2H2PF00096.263.3e-1122
MGP_CAROLIEiJ_P0056396zf-C2H2PF00096.263.4e-0812
MGP_CAROLIEiJ_P0056396zf-C2H2PF00096.263.4e-0822
MGP_CAROLIEiJ_P0056395zf-metPF12874.72.3e-1111
MGP_CAROLIEiJ_P0056398zf-metPF12874.71.3e-0912
MGP_CAROLIEiJ_P0056398zf-metPF12874.71.3e-0922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0056401-328--- (aa)--
MGP_CAROLIEiJ_T0056395-5038XM_021155714MGP_CAROLIEiJ_P00563951068 (aa)XP_021011373UPI000A316952
MGP_CAROLIEiJ_T0056400-424--- (aa)--
MGP_CAROLIEiJ_T0056397-2559XM_021155718MGP_CAROLIEiJ_P0056397278 (aa)XP_021011377UPI000A317242
MGP_CAROLIEiJ_T0056396-3706XM_021155716MGP_CAROLIEiJ_P0056396624 (aa)XP_021011375UPI000A317106
MGP_CAROLIEiJ_T0056399-777-MGP_CAROLIEiJ_P0056399216 (aa)--
MGP_CAROLIEiJ_T0056398-393-MGP_CAROLIEiJ_P0056398131 (aa)-UPI0000D779FA
Gene Model
Click here to download MGP_CAROLIEiJ_G0024723's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024723's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0024723Sall49884.507MGP_CAROLIEiJ_G0022442Sall37165.385
MGP_CAROLIEiJ_G0024723Sall47353.333MGP_CAROLIEiJ_G0022445Zfp2367653.333
MGP_CAROLIEiJ_G0024723Sall410064.706MGP_CAROLIEiJ_G0031362Sall19564.706
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024723Sall410095.833ENSG00000101115SALL410078.571Homo_sapiens
MGP_CAROLIEiJ_G0024723Sall410084.722ENSAPOG00000002465sall410041.891Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSAMEG00000013250-10072.820Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024723Sall49380.556ENSACIG00000017298sall410041.788Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSAOCG00000023678sall410042.684Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024723Sall410084.722ENSAPEG00000000751sall410042.511Amphiprion_percula
MGP_CAROLIEiJ_G0024723Sall410084.722ENSATEG00000024480sall410042.341Anabas_testudineus
MGP_CAROLIEiJ_G0024723Sall49887.500ENSAPLG00000006498SALL410051.736Anas_platyrhynchos
MGP_CAROLIEiJ_G0024723Sall410087.500ENSACAG00000012748SALL410051.724Anolis_carolinensis
MGP_CAROLIEiJ_G0024723Sall410095.833ENSANAG00000023352SALL410077.305Aotus_nancymaae
MGP_CAROLIEiJ_G0024723Sall410081.944ENSACLG00000017851sall410041.774Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024723Sall410086.111ENSAMXG00000001254sall49943.486Astyanax_mexicanus
MGP_CAROLIEiJ_G0024723Sall410091.667ENSBTAG00000003101SALL410067.963Bos_taurus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCJAG00000000591SALL49974.048Callithrix_jacchus
MGP_CAROLIEiJ_G0024723Sall410094.444ENSCAFG00000011738-10072.770Canis_familiaris
MGP_CAROLIEiJ_G0024723Sall410094.444ENSCAFG00020021870SALL410072.677Canis_lupus_dingo
MGP_CAROLIEiJ_G0024723Sall410087.500ENSCHIG00000026270SALL410067.190Capra_hircus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSTSYG00000007359SALL410076.050Carlito_syrichta
MGP_CAROLIEiJ_G0024723Sall49991.549ENSCAPG00000012135SALL49772.297Cavia_aperea
MGP_CAROLIEiJ_G0024723Sall49979.231ENSCPOG00000038489-9991.429Cavia_porcellus
MGP_CAROLIEiJ_G0024723Sall410079.211ENSCPOG00000036300-10079.498Cavia_porcellus
MGP_CAROLIEiJ_G0024723Sall410094.444ENSCCAG00000029512-10071.332Cebus_capucinus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCATG00000030757SALL410077.305Cercocebus_atys
MGP_CAROLIEiJ_G0024723Sall410091.667ENSCLAG00000010479SALL410082.008Chinchilla_lanigera
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCSAG00000015269SALL410073.860Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024723Sall49887.500ENSCPBG00000014995SALL410052.522Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCANG00000036463SALL410073.674Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCGRG00001019569Sall410084.532Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024723Sall410095.833ENSCGRG00000000462Sall410087.786Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024723Sall410084.722ENSCSEG00000014604sall410042.251Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024723Sall410083.333ENSCVAG00000010815sall410041.767Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSDARG00000044485sall49942.640Danio_rerio
MGP_CAROLIEiJ_G0024723Sall410094.444ENSDNOG00000040633SALL410072.052Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024723Sall410088.889ENSDORG00000012841Sall410085.393Dipodomys_ordii
MGP_CAROLIEiJ_G0024723Sall48972.289ENSETEG00000012475-6667.051Echinops_telfairi
MGP_CAROLIEiJ_G0024723Sall45170.370ENSEBUG00000015425-5870.370Eptatretus_burgeri
MGP_CAROLIEiJ_G0024723Sall410095.833ENSECAG00000018533SALL410073.234Equus_caballus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSEEUG00000003649SALL49970.084Erinaceus_europaeus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSELUG00000005696sall410042.233Esox_lucius
MGP_CAROLIEiJ_G0024723Sall410094.444ENSFCAG00000002822SALL410075.887Felis_catus
MGP_CAROLIEiJ_G0024723Sall49890.141ENSFALG00000013149SALL410051.688Ficedula_albicollis
MGP_CAROLIEiJ_G0024723Sall410093.056ENSFDAG00000017812SALL410080.335Fukomys_damarensis
MGP_CAROLIEiJ_G0024723Sall410086.111ENSFHEG00000014187sall410041.969Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSGMOG00000003822sall410042.474Gadus_morhua
MGP_CAROLIEiJ_G0024723Sall49887.500ENSGALG00000041365SALL410051.691Gallus_gallus
MGP_CAROLIEiJ_G0024723Sall410086.111ENSGAFG00000019925sall410042.440Gambusia_affinis
MGP_CAROLIEiJ_G0024723Sall49284.722ENSGACG00000011124sall410040.921Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024723Sall49887.500ENSGAGG00000002297SALL410052.261Gopherus_agassizii
MGP_CAROLIEiJ_G0024723Sall410095.833ENSGGOG00000001832SALL410076.950Gorilla_gorilla
MGP_CAROLIEiJ_G0024723Sall410081.944ENSHBUG00000007327sall410041.860Haplochromis_burtoni
MGP_CAROLIEiJ_G0024723Sall410094.444ENSHGLG00000009043SALL49672.190Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024723Sall410094.444ENSHGLG00100002722SALL49672.287Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024723Sall410084.722ENSHCOG00000008519sall410041.688Hippocampus_comes
MGP_CAROLIEiJ_G0024723Sall410086.111ENSIPUG00000019170sall49942.403Ictalurus_punctatus
MGP_CAROLIEiJ_G0024723Sall410083.969ENSSTOG00000025002SALL410094.366Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024723Sall49898.611ENSJJAG00000020688Sall49898.592Jaculus_jaculus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSKMAG00000002501sall410042.440Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024723Sall45062.687ENSLBEG00000002594-6258.228Labrus_bergylta
MGP_CAROLIEiJ_G0024723Sall410084.722ENSLBEG00000019951sall410042.710Labrus_bergylta
MGP_CAROLIEiJ_G0024723Sall49956.198ENSLACG00000013898SALL410059.259Latimeria_chalumnae
MGP_CAROLIEiJ_G0024723Sall410084.722ENSLOCG00000002427sall410045.214Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024723Sall410097.222ENSLAFG00000004309SALL410072.481Loxodonta_africana
MGP_CAROLIEiJ_G0024723Sall410095.833ENSMFAG00000027169SALL410074.047Macaca_fascicularis
MGP_CAROLIEiJ_G0024723Sall410095.833ENSMMUG00000003870SALL410078.992Macaca_mulatta
MGP_CAROLIEiJ_G0024723Sall410095.833ENSMNEG00000035995SALL410077.305Macaca_nemestrina
MGP_CAROLIEiJ_G0024723Sall410095.833ENSMLEG00000030467SALL410073.860Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSMAMG00000005223sall410042.432Mastacembelus_armatus
MGP_CAROLIEiJ_G0024723Sall410081.944ENSMZEG00005023418sall410041.688Maylandia_zebra
MGP_CAROLIEiJ_G0024723Sall49887.500ENSMGAG00000009344SALL49965.385Meleagris_gallopavo
MGP_CAROLIEiJ_G0024723Sall410093.056ENSMAUG00000015814Sall410085.496Mesocricetus_auratus
MGP_CAROLIEiJ_G0024723Sall410097.222ENSMICG00000000027SALL410077.061Microcebus_murinus
MGP_CAROLIEiJ_G0024723Sall410094.521ENSMOCG00000018245Sall410094.521Microtus_ochrogaster
MGP_CAROLIEiJ_G0024723Sall410084.722ENSMMOG00000014929sall410041.459Mola_mola
MGP_CAROLIEiJ_G0024723Sall410086.111ENSMODG00000016387SALL49755.694Monodelphis_domestica
MGP_CAROLIEiJ_G0024723Sall410084.722ENSMALG00000018709sall410042.697Monopterus_albus
MGP_CAROLIEiJ_G0024723Sall4100100.000ENSMUSG00000027547Sall4100100.000Mus_musculus
MGP_CAROLIEiJ_G0024723Sall410098.611MGP_PahariEiJ_G0026164Sall410098.611Mus_pahari
MGP_CAROLIEiJ_G0024723Sall4100100.000MGP_SPRETEiJ_G0025643Sall4100100.000Mus_spretus
MGP_CAROLIEiJ_G0024723Sall49894.444ENSMPUG00000017543SALL49672.130Mustela_putorius_furo
MGP_CAROLIEiJ_G0024723Sall49888.889ENSMLUG00000008405-10064.640Myotis_lucifugus
MGP_CAROLIEiJ_G0024723Sall49471.212ENSMLUG00000028073-9951.308Myotis_lucifugus
MGP_CAROLIEiJ_G0024723Sall49891.667ENSMLUG00000007060-10071.609Myotis_lucifugus
MGP_CAROLIEiJ_G0024723Sall410094.444ENSNGAG00000017833Sall410082.079Nannospalax_galili
MGP_CAROLIEiJ_G0024723Sall49781.944ENSNBRG00000001829sall410041.952Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024723Sall410095.833ENSNLEG00000007013SALL410073.860Nomascus_leucogenys
MGP_CAROLIEiJ_G0024723Sall410086.111ENSMEUG00000005793-10061.538Notamacropus_eugenii
MGP_CAROLIEiJ_G0024723Sall410095.833ENSOPRG00000011640SALL410070.648Ochotona_princeps
MGP_CAROLIEiJ_G0024723Sall410081.944ENSONIG00000016557sall410042.002Oreochromis_niloticus
MGP_CAROLIEiJ_G0024723Sall410088.889ENSOANG00000008667SALL49756.942Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024723Sall49992.958ENSOCUG00000011797SALL410071.429Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024723Sall49986.111ENSORLG00000016130sall410042.406Oryzias_latipes
MGP_CAROLIEiJ_G0024723Sall49986.111ENSORLG00020007339sall410041.891Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024723Sall49986.111ENSORLG00015002265sall410042.298Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024723Sall49986.111ENSOMEG00000017344sall410041.848Oryzias_melastigma
MGP_CAROLIEiJ_G0024723Sall410094.444ENSOGAG00000013799SALL49972.297Otolemur_garnettii
MGP_CAROLIEiJ_G0024723Sall410084.722ENSOARG00000014570SALL410063.011Ovis_aries
MGP_CAROLIEiJ_G0024723Sall410095.833ENSPPAG00000038064SALL410076.950Pan_paniscus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSPPRG00000008677SALL410075.177Panthera_pardus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSPTRG00000013631SALL410076.950Pan_troglodytes
MGP_CAROLIEiJ_G0024723Sall410095.833ENSPANG00000021792SALL410077.305Papio_anubis
MGP_CAROLIEiJ_G0024723Sall49387.324ENSPKIG00000007074sall410043.029Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024723Sall49887.500ENSPSIG00000009066SALL410051.736Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024723Sall410083.333ENSPMGG00000022551sall410041.645Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024723Sall410097.222ENSPEMG00000022706Sall410097.222Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024723Sall410087.500ENSPCIG00000022838SALL49754.522Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024723Sall410086.111ENSPFOG00000001442sall410042.771Poecilia_formosa
MGP_CAROLIEiJ_G0024723Sall410086.111ENSPLAG00000008760sall410042.685Poecilia_latipinna
MGP_CAROLIEiJ_G0024723Sall410086.111ENSPMEG00000008497sall410042.710Poecilia_mexicana
MGP_CAROLIEiJ_G0024723Sall49985.915ENSPREG00000021140sall410043.139Poecilia_reticulata
MGP_CAROLIEiJ_G0024723Sall410094.444ENSPPYG00000011138SALL410073.581Pongo_abelii
MGP_CAROLIEiJ_G0024723Sall410094.444ENSPCAG00000004726SALL49967.721Procavia_capensis
MGP_CAROLIEiJ_G0024723Sall410095.833ENSPCOG00000016321SALL410076.241Propithecus_coquereli
MGP_CAROLIEiJ_G0024723Sall49890.278ENSPVAG00000002075SALL49470.858Pteropus_vampyrus
MGP_CAROLIEiJ_G0024723Sall410081.944ENSPNYG00000021738sall410041.897Pundamilia_nyererei
MGP_CAROLIEiJ_G0024723Sall410087.500ENSPNAG00000020929sall49942.526Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024723Sall410097.222ENSRNOG00000050035Sall410090.071Rattus_norvegicus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSRBIG00000039876SALL410073.868Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024723Sall410095.833ENSRROG00000036585SALL410073.581Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024723Sall410095.833ENSSBOG00000030011SALL410077.406Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024723Sall410086.111ENSSHAG00000018013SALL48865.306Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024723Sall49384.722ENSSFOG00015021075sall410042.932Scleropages_formosus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSSMAG00000019218sall49942.281Scophthalmus_maximus
MGP_CAROLIEiJ_G0024723Sall410084.722ENSSDUG00000004657sall410042.060Seriola_dumerili
MGP_CAROLIEiJ_G0024723Sall410084.722ENSSLDG00000004973sall410042.489Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024723Sall410084.722ENSSPAG00000001978sall410042.559Stegastes_partitus
MGP_CAROLIEiJ_G0024723Sall49894.444ENSSSCG00000007479SALL410071.402Sus_scrofa
MGP_CAROLIEiJ_G0024723Sall410055.034ENSTGUG00000018244-10054.027Taeniopygia_guttata
MGP_CAROLIEiJ_G0024723Sall410084.722ENSTRUG00000007410sall410043.348Takifugu_rubripes
MGP_CAROLIEiJ_G0024723Sall45061.194ENSTNIG00000013008-5155.357Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024723Sall410084.722ENSTNIG00000012460sall410042.028Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024723Sall410095.833ENSTTRG00000007753SALL49970.039Tursiops_truncatus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSUAMG00000010113SALL410072.913Ursus_americanus
MGP_CAROLIEiJ_G0024723Sall410095.833ENSUMAG00000024274SALL49972.824Ursus_maritimus
MGP_CAROLIEiJ_G0024723Sall49885.915ENSXETG00000012326sall410046.561Xenopus_tropicalis
MGP_CAROLIEiJ_G0024723Sall410086.111ENSXCOG00000015467sall410040.493Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024723Sall410086.111ENSXMAG00000012692sall410040.929Xiphophorus_maculatus

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