EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024745 (Gene tree)
Gene ID
110286974
Gene Symbol
Rbm38
Alias
Rnpc1|Seb4l
Full Name
RNA binding motif protein 38
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
12944 bases
Position
chr2:164972043-164984986
Accession
110286974
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0056470RRM_1PF00076.221e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0056470-1629XM_021153667MGP_CAROLIEiJ_P0056470237 (aa)XP_021009326UPI000A31A98C
MGP_CAROLIEiJ_T0056471-620-MGP_CAROLIEiJ_P0056471107 (aa)--
MGP_CAROLIEiJ_T0056472-440-MGP_CAROLIEiJ_P0056472125 (aa)--
MGP_CAROLIEiJ_T0056473-1519--- (aa)--
MGP_CAROLIEiJ_T0056469-2270--- (aa)--
MGP_CAROLIEiJ_T0056468-936-MGP_CAROLIEiJ_P005646878 (aa)-UPI00021CF752
Gene Model
Click here to download MGP_CAROLIEiJ_G0024745's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024745's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0024745Rbm386646.809MGP_CAROLIEiJ_G0027626Msi16151.064
MGP_CAROLIEiJ_G0024745Rbm387735.484MGP_CAROLIEiJ_G0015574Dazap18635.802
MGP_CAROLIEiJ_G0024745Rbm387038.095MGP_CAROLIEiJ_G0016948Msi27337.349
MGP_CAROLIEiJ_G0024745Rbm386391.837MGP_CAROLIEiJ_G0018481Rbm2410068.067
MGP_CAROLIEiJ_G0024745Rbm385136.364MGP_CAROLIEiJ_G0027446Hnrnpd5136.364
MGP_CAROLIEiJ_G0024745Rbm387438.043MGP_CAROLIEiJ_G0015568Cirbp7840.476
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024745Rbm3810094.142ENSG00000132819RBM3810094.215Homo_sapiens
MGP_CAROLIEiJ_G0024745Rbm388958.621ENSAPOG00000003301rbm389158.621Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024745Rbm389464.758ENSAPOG00000009939-9762.115Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024745Rbm388956.652ENSACIG00000000010rbm389156.652Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024745Rbm389466.087ENSACIG00000012502-10087.179Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024745Rbm389563.913ENSAOCG00000012559RBM389361.739Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024745Rbm388958.621ENSAOCG00000013497-9158.621Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024745Rbm389462.295ENSAPEG00000023581-9760.494Amphiprion_percula
MGP_CAROLIEiJ_G0024745Rbm388962.791ENSAPEG00000013137rbm388862.791Amphiprion_percula
MGP_CAROLIEiJ_G0024745Rbm389462.551ENSATEG00000016710-9262.771Anabas_testudineus
MGP_CAROLIEiJ_G0024745Rbm389161.161ENSATEG00000016366rbm389461.161Anabas_testudineus
MGP_CAROLIEiJ_G0024745Rbm389277.727ENSACAG00000016238RBM389572.609Anolis_carolinensis
MGP_CAROLIEiJ_G0024745Rbm389194.907ENSANAG00000031959RBM3810094.907Aotus_nancymaae
MGP_CAROLIEiJ_G0024745Rbm389463.786ENSACLG00000019514-9761.317Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024745Rbm387863.784ENSAMXG00000038120rbm387067.683Astyanax_mexicanus
MGP_CAROLIEiJ_G0024745Rbm389465.532ENSAMXG00000015601-9764.255Astyanax_mexicanus
MGP_CAROLIEiJ_G0024745Rbm3810090.795ENSBTAG00000008105RBM3810090.795Bos_taurus
MGP_CAROLIEiJ_G0024745Rbm385579.070WBGene00006321sup-125984.270Caenorhabditis_elegans
MGP_CAROLIEiJ_G0024745Rbm3810092.887ENSCJAG00000019139RBM3810094.215Callithrix_jacchus
MGP_CAROLIEiJ_G0024745Rbm3810091.213ENSCAFG00020021943RBM3810091.213Canis_lupus_dingo
MGP_CAROLIEiJ_G0024745Rbm3810089.958ENSCHIG00000002609RBM3810089.958Capra_hircus
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSCPOG00000012781RBM3810093.305Cavia_porcellus
MGP_CAROLIEiJ_G0024745Rbm3810092.887ENSCCAG00000036872RBM3810094.215Cebus_capucinus
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSCATG00000032133RBM3810094.215Cercocebus_atys
MGP_CAROLIEiJ_G0024745Rbm389594.690ENSCLAG00000005906RBM389894.690Chinchilla_lanigera
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSCSAG00000015503RBM3810093.305Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024745Rbm389181.193ENSCPBG00000024059RBM3810077.982Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024745Rbm389971.849ENSCANG00000030105-8971.849Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024745Rbm3810095.359ENSCGRG00001012928Rbm3810095.359Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024745Rbm389368.421ENSCSEG00000004701-9666.228Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024745Rbm388363.077ENSCSEG00000020943rbm385664.881Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024745Rbm388959.052ENSCVAG00000015952rbm389159.657Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024745Rbm388965.948ENSCVAG00000005472-9264.103Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024745Rbm385895.556ENSDARG00000058818rbm389261.435Danio_rerio
MGP_CAROLIEiJ_G0024745Rbm389187.963ENSDNOG00000032004RBM3810084.722Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024745Rbm387878.689ENSEBUG00000015164rbm386881.818Eptatretus_burgeri
MGP_CAROLIEiJ_G0024745Rbm3810089.540ENSECAG00000007700RBM3810089.540Equus_caballus
MGP_CAROLIEiJ_G0024745Rbm3810088.333ENSEEUG00000013489RBM3810087.500Erinaceus_europaeus
MGP_CAROLIEiJ_G0024745Rbm386388.000ENSELUG00000000585-8764.677Esox_lucius
MGP_CAROLIEiJ_G0024745Rbm389264.854ENSELUG00000005849-9563.291Esox_lucius
MGP_CAROLIEiJ_G0024745Rbm3810092.050ENSFCAG00000042916RBM3810092.562Felis_catus
MGP_CAROLIEiJ_G0024745Rbm387582.022ENSFALG00000010805RBM388881.287Ficedula_albicollis
MGP_CAROLIEiJ_G0024745Rbm388957.082ENSFHEG00000017748rbm389157.082Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024745Rbm388971.759ENSFHEG00000006160-9268.837Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024745Rbm385893.333ENSGMOG00000016655-8775.460Gadus_morhua
MGP_CAROLIEiJ_G0024745Rbm389179.358ENSGALG00000026081RBM3810076.147Gallus_gallus
MGP_CAROLIEiJ_G0024745Rbm388962.736ENSGACG00000015224rbm389862.911Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024745Rbm389167.411ENSGACG00000009873-10063.839Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024745Rbm389181.651ENSGAGG00000001187RBM3810078.440Gopherus_agassizii
MGP_CAROLIEiJ_G0024745Rbm3810058.367ENSHBUG00000012058rbm3810058.367Haplochromis_burtoni
MGP_CAROLIEiJ_G0024745Rbm389467.391ENSHBUG00000011778-9764.783Haplochromis_burtoni
MGP_CAROLIEiJ_G0024745Rbm3810092.050ENSHGLG00000015077RBM3810092.050Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024745Rbm385679.545ENSHCOG00000019040rbm386568.212Hippocampus_comes
MGP_CAROLIEiJ_G0024745Rbm387180.702ENSHCOG00000005622-5567.857Hippocampus_comes
MGP_CAROLIEiJ_G0024745Rbm3810061.111ENSIPUG00000019349-10059.127Ictalurus_punctatus
MGP_CAROLIEiJ_G0024745Rbm389592.105ENSJJAG00000016299-9592.105Jaculus_jaculus
MGP_CAROLIEiJ_G0024745Rbm388952.966ENSKMAG00000012402rbm389852.966Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024745Rbm388958.369ENSLBEG00000018878rbm389158.369Labrus_bergylta
MGP_CAROLIEiJ_G0024745Rbm389466.522ENSLBEG00000016163RBM389266.514Labrus_bergylta
MGP_CAROLIEiJ_G0024745Rbm389271.239ENSLOCG00000003456rbm389569.027Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024745Rbm389793.534ENSMFAG00000043808RBM389793.534Macaca_fascicularis
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSMMUG00000031391RBM3810094.215Macaca_mulatta
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSMNEG00000034683RBM3810094.215Macaca_nemestrina
MGP_CAROLIEiJ_G0024745Rbm385670.455ENSMLEG00000043261-8881.651Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024745Rbm388958.798ENSMAMG00000024135rbm389158.798Mastacembelus_armatus
MGP_CAROLIEiJ_G0024745Rbm389462.397ENSMAMG00000020499RBM389761.157Mastacembelus_armatus
MGP_CAROLIEiJ_G0024745Rbm388957.082ENSMZEG00005026036rbm389157.082Maylandia_zebra
MGP_CAROLIEiJ_G0024745Rbm389467.391ENSMZEG00005000849-9764.783Maylandia_zebra
MGP_CAROLIEiJ_G0024745Rbm3810095.781ENSMAUG00000021211Rbm3810095.781Mesocricetus_auratus
MGP_CAROLIEiJ_G0024745Rbm389194.907ENSMICG00000038011RBM3810094.907Microcebus_murinus
MGP_CAROLIEiJ_G0024745Rbm3810095.781ENSMOCG00000008715Rbm3810095.781Microtus_ochrogaster
MGP_CAROLIEiJ_G0024745Rbm389467.105ENSMMOG00000020051-9664.474Mola_mola
MGP_CAROLIEiJ_G0024745Rbm3810078.333ENSMODG00000016458RBM3810075.833Monodelphis_domestica
MGP_CAROLIEiJ_G0024745Rbm386379.592ENSMALG00000022327rbm386771.613Monopterus_albus
MGP_CAROLIEiJ_G0024745Rbm387180.702ENSMALG00000004680RBM387268.394Monopterus_albus
MGP_CAROLIEiJ_G0024745Rbm38100100.000ENSMUSG00000027510Rbm38100100.000Mus_musculus
MGP_CAROLIEiJ_G0024745Rbm3810098.718MGP_PahariEiJ_G0026186Rbm3810098.718Mus_pahari
MGP_CAROLIEiJ_G0024745Rbm38100100.000MGP_SPRETEiJ_G0025665Rbm38100100.000Mus_spretus
MGP_CAROLIEiJ_G0024745Rbm387894.595ENSMPUG00000006518RBM389593.194Mustela_putorius_furo
MGP_CAROLIEiJ_G0024745Rbm389190.741ENSMLUG00000011140RBM3810090.741Myotis_lucifugus
MGP_CAROLIEiJ_G0024745Rbm389782.278ENSNGAG00000014017-6486.486Nannospalax_galili
MGP_CAROLIEiJ_G0024745Rbm389463.786ENSNBRG00000022545-9263.203Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024745Rbm3810057.724ENSNBRG00000022685rbm389957.724Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024745Rbm389077.778ENSMEUG00000005475-10073.913Notamacropus_eugenii
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSODEG00000007980RBM3810093.305Octodon_degus
MGP_CAROLIEiJ_G0024745Rbm388957.328ENSONIG00000017073rbm389358.190Oreochromis_niloticus
MGP_CAROLIEiJ_G0024745Rbm389363.636ENSONIG00000020324-9263.043Oreochromis_niloticus
MGP_CAROLIEiJ_G0024745Rbm389179.630ENSOANG00000009259RBM388376.389Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024745Rbm388963.362ENSORLG00000027180-9262.069Oryzias_latipes
MGP_CAROLIEiJ_G0024745Rbm386382.000ENSORLG00000012154rbm389154.701Oryzias_latipes
MGP_CAROLIEiJ_G0024745Rbm388963.362ENSORLG00020020751-9262.069Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024745Rbm386382.000ENSORLG00020017871rbm389155.556Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024745Rbm389058.525ENSORLG00015012606rbm389058.525Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024745Rbm388962.771ENSORLG00015017040-9262.931Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024745Rbm388962.771ENSOMEG00000023912-9261.304Oryzias_melastigma
MGP_CAROLIEiJ_G0024745Rbm388955.128ENSOMEG00000006805rbm389155.128Oryzias_melastigma
MGP_CAROLIEiJ_G0024745Rbm3810092.500ENSOGAG00000029136RBM3810092.500Otolemur_garnettii
MGP_CAROLIEiJ_G0024745Rbm386397.959ENSPPAG00000040327-8581.159Pan_paniscus
MGP_CAROLIEiJ_G0024745Rbm3810092.050ENSPPRG00000009507RBM3810092.562Panthera_pardus
MGP_CAROLIEiJ_G0024745Rbm3863100.000ENSPTRG00000045845-7095.312Pan_troglodytes
MGP_CAROLIEiJ_G0024745Rbm389290.541ENSPTRG00000013661RBM3810094.215Pan_troglodytes
MGP_CAROLIEiJ_G0024745Rbm3810093.305ENSPANG00000020919-10094.215Papio_anubis
MGP_CAROLIEiJ_G0024745Rbm389872.996ENSPANG00000033127-9972.689Papio_anubis
MGP_CAROLIEiJ_G0024745Rbm389662.097ENSPKIG00000025417rbm389960.081Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024745Rbm388967.273ENSPKIG00000018122-10088.034Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024745Rbm389777.922ENSPSIG00000011649RBM389774.892Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024745Rbm389260.000ENSPMGG00000017094-9459.833Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024745Rbm389157.143ENSPMGG00000011343rbm386569.565Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024745Rbm3810078.333ENSPCIG00000013648RBM3810075.833Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024745Rbm385886.667ENSPFOG00000011658rbm389158.120Poecilia_formosa
MGP_CAROLIEiJ_G0024745Rbm388956.540ENSPLAG00000005218rbm389158.120Poecilia_latipinna
MGP_CAROLIEiJ_G0024745Rbm388966.383ENSPLAG00000002500-9264.103Poecilia_latipinna
MGP_CAROLIEiJ_G0024745Rbm385886.667ENSPMEG00000015770rbm389158.120Poecilia_mexicana
MGP_CAROLIEiJ_G0024745Rbm388955.696ENSPREG00000007398rbm389158.547Poecilia_reticulata
MGP_CAROLIEiJ_G0024745Rbm3810092.917ENSPCOG00000026201RBM3810093.443Propithecus_coquereli
MGP_CAROLIEiJ_G0024745Rbm389088.889ENSPVAG00000006457RBM3810064.435Pteropus_vampyrus
MGP_CAROLIEiJ_G0024745Rbm388969.725ENSPNYG00000019727-10088.034Pundamilia_nyererei
MGP_CAROLIEiJ_G0024745Rbm3810057.202ENSPNYG00000021373rbm3810055.600Pundamilia_nyererei
MGP_CAROLIEiJ_G0024745Rbm389266.667ENSPNAG00000015123-9677.273Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024745Rbm386091.489ENSPNAG00000010596rbm388861.972Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024745Rbm3810097.468ENSRNOG00000006420Rbm3810097.468Rattus_norvegicus
MGP_CAROLIEiJ_G0024745Rbm3810076.987ENSRROG00000036388-10076.987Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024745Rbm389193.981ENSSBOG00000031053RBM3810097.196Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024745Rbm389464.935ENSSFOG00015004453rbm389266.818Scleropages_formosus
MGP_CAROLIEiJ_G0024745Rbm389463.265ENSSDUG00000021082RBM389262.931Seriola_dumerili
MGP_CAROLIEiJ_G0024745Rbm388959.657ENSSDUG00000022611rbm389159.657Seriola_dumerili
MGP_CAROLIEiJ_G0024745Rbm389463.265ENSSLDG00000011778RBM389262.931Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024745Rbm389760.169ENSSLDG00000010845rbm389760.169Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024745Rbm389464.889ENSSPAG00000020989RBM389165.888Stegastes_partitus
MGP_CAROLIEiJ_G0024745Rbm388958.369ENSSPAG00000011113rbm389158.369Stegastes_partitus
MGP_CAROLIEiJ_G0024745Rbm3810092.469ENSSSCG00000007504RBM3810092.469Sus_scrofa
MGP_CAROLIEiJ_G0024745Rbm389463.934ENSTRUG00000019869-9264.655Takifugu_rubripes
MGP_CAROLIEiJ_G0024745Rbm388956.332ENSTRUG00000024954rbm389155.895Takifugu_rubripes
MGP_CAROLIEiJ_G0024745Rbm388969.231ENSTNIG00000007093-9766.968Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024745Rbm389074.286ENSTBEG00000001689-6483.333Tupaia_belangeri
MGP_CAROLIEiJ_G0024745Rbm3810092.469ENSUAMG00000019780RBM3810092.469Ursus_americanus
MGP_CAROLIEiJ_G0024745Rbm3810091.213ENSVVUG00000017246RBM3810091.213Vulpes_vulpes
MGP_CAROLIEiJ_G0024745Rbm389273.333ENSXETG00000011268rbm3810071.556Xenopus_tropicalis
MGP_CAROLIEiJ_G0024745Rbm385993.478ENSXCOG00000017324-6077.444Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024745Rbm388957.627ENSXMAG00000023662rbm389158.369Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us