EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024806 (Gene tree)
Gene ID: 110311878
Gene Symbol: Zgpat
Alias: -
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 18161 bases
Position: chr2:170899335-170917495
Accession: 110311878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0056732	G-patch	PF01585.23	9.2e-12	1	1
MGP_CAROLIEiJ_P0056733	G-patch	PF01585.23	9.2e-12	1	1
MGP_CAROLIEiJ_P0056737	G-patch	PF01585.23	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0056737	-	793	-	MGP_CAROLIEiJ_P0056737	184 (aa)	-	-
MGP_CAROLIEiJ_T0056736	-	679	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0056735	-	4905	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0056734	-	3679	-	MGP_CAROLIEiJ_P0056734	514 (aa)	-	UPI000A3194C5
MGP_CAROLIEiJ_T0056733	-	2081	XM_021185456	MGP_CAROLIEiJ_P0056733	514 (aa)	XP_021041115	UPI000A3194C5
MGP_CAROLIEiJ_T0056732	-	2285	-	MGP_CAROLIEiJ_P0056732	514 (aa)	-	UPI000A3194C5

Gene Model

Click here to download MGP_CAROLIEiJ_G0024806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024806	Zgpat	100	79.845	ENSG00000197114	ZGPAT	100	79.264	Homo_sapiens
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.248	ENSAPOG00000001732	zgpat	100	51.248	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.058	ENSAMEG00000001752	-	100	78.058	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.190	ENSACIG00000015939	zgpat	100	50.652	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.752	ENSAOCG00000014437	zgpat	100	51.128	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.940	ENSAPEG00000006555	zgpat	100	51.316	Amphiprion_percula
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.560	ENSATEG00000003346	zgpat	100	50.560	Anabas_testudineus
MGP_CAROLIEiJ_G0024806	Zgpat	100	64.762	ENSAPLG00000014707	-	100	62.873	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024806	Zgpat	91	61.010	ENSACAG00000012278	-	100	61.010	Anolis_carolinensis
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.156	ENSANAG00000035708	ZGPAT	100	79.961	Aotus_nancymaae
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.093	ENSACLG00000013778	zgpat	100	50.370	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.507	ENSAMXG00000018583	zgpat	100	49.074	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.626	ENSBTAG00000007498	ZGPAT	100	77.626	Bos_taurus
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.764	ENSCJAG00000010398	ZGPAT	100	78.764	Callithrix_jacchus
MGP_CAROLIEiJ_G0024806	Zgpat	99	73.938	ENSCAFG00000013056	ZGPAT	99	73.552	Canis_familiaris
MGP_CAROLIEiJ_G0024806	Zgpat	100	74.181	ENSCAFG00020001956	-	100	73.410	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.043	ENSCHIG00000026209	-	100	77.043	Capra_hircus
MGP_CAROLIEiJ_G0024806	Zgpat	96	75.551	ENSTSYG00000000795	ZGPAT	97	75.351	Carlito_syrichta
MGP_CAROLIEiJ_G0024806	Zgpat	84	79.355	ENSCAPG00000009466	-	100	69.811	Cavia_aperea
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.971	ENSCPOG00000014427	ZGPAT	100	80.971	Cavia_porcellus
MGP_CAROLIEiJ_G0024806	Zgpat	100	79.377	ENSCCAG00000035441	ZGPAT	100	79.183	Cebus_capucinus
MGP_CAROLIEiJ_G0024806	Zgpat	100	79.806	ENSCATG00000034076	ZGPAT	100	79.806	Cercocebus_atys
MGP_CAROLIEiJ_G0024806	Zgpat	100	84.272	ENSCLAG00000004087	ZGPAT	100	84.078	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.383	ENSCSAG00000016628	ZGPAT	100	77.009	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024806	Zgpat	73	64.444	ENSCHOG00000013646	-	84	60.287	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024806	Zgpat	100	61.596	ENSCPBG00000014736	-	99	62.197	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.388	ENSCANG00000041082	ZGPAT	100	79.806	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	90.661	ENSCGRG00001011442	Zgpat	100	90.272	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024806	Zgpat	100	81.712	ENSCGRG00000014321	Zgpat	100	81.323	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.889	ENSCSEG00000002301	zgpat	100	48.708	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.000	ENSCVAG00000007255	zgpat	100	49.907	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	47.736	ENSDARG00000027403	zgpat	100	47.925	Danio_rerio
MGP_CAROLIEiJ_G0024806	Zgpat	100	74.952	ENSDNOG00000025874	-	100	75.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024806	Zgpat	96	80.448	ENSDORG00000001360	Zgpat	100	79.633	Dipodomys_ordii
MGP_CAROLIEiJ_G0024806	Zgpat	93	39.504	ENSEBUG00000009006	ZGPAT	99	38.462	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024806	Zgpat	100	67.358	ENSEASG00005023159	-	100	67.490	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024806	Zgpat	100	69.750	ENSECAG00000019674	-	100	69.557	Equus_caballus
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.148	ENSELUG00000003733	zgpat	100	48.148	Esox_lucius
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.282	ENSFCAG00000001173	-	100	78.447	Felis_catus
MGP_CAROLIEiJ_G0024806	Zgpat	100	63.653	ENSFALG00000005924	-	100	64.022	Ficedula_albicollis
MGP_CAROLIEiJ_G0024806	Zgpat	100	81.359	ENSFDAG00000002974	ZGPAT	100	81.359	Fukomys_damarensis
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.262	ENSFHEG00000009966	zgpat	100	50.373	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024806	Zgpat	100	62.247	ENSGALG00000006092	-	100	62.247	Gallus_gallus
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.148	ENSGAFG00000020149	zgpat	100	48.889	Gambusia_affinis
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.071	ENSGACG00000004662	zgpat	100	48.980	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	61.039	ENSGAGG00000019510	-	99	62.431	Gopherus_agassizii
MGP_CAROLIEiJ_G0024806	Zgpat	100	76.493	ENSGGOG00000004801	ZGPAT	100	75.933	Gorilla_gorilla
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.093	ENSHBUG00000010362	zgpat	100	50.556	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.038	ENSHGLG00000014870	ZGPAT	100	79.848	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024806	Zgpat	100	82.524	ENSHGLG00100003927	ZGPAT	100	82.330	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.000	ENSHCOG00000004674	zgpat	100	50.370	Hippocampus_comes
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.343	ENSIPUG00000012890	zgpat	100	50.379	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024806	Zgpat	95	77.551	ENSSTOG00000011986	ZGPAT	100	76.735	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	76.848	ENSJJAG00000008007	-	100	75.875	Jaculus_jaculus
MGP_CAROLIEiJ_G0024806	Zgpat	100	84.630	ENSJJAG00000018714	-	100	83.658	Jaculus_jaculus
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.351	ENSKMAG00000006523	zgpat	100	49.815	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.094	ENSLBEG00000016259	zgpat	100	50.373	Labrus_bergylta
MGP_CAROLIEiJ_G0024806	Zgpat	100	57.904	ENSLACG00000002661	zgpat	100	57.721	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024806	Zgpat	100	55.028	ENSLOCG00000001659	zgpat	100	55.408	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.194	ENSMFAG00000001467	ZGPAT	100	79.806	Macaca_fascicularis
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.000	ENSMMUG00000000171	ZGPAT	100	79.612	Macaca_mulatta
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.000	ENSMNEG00000019568	ZGPAT	100	79.612	Macaca_nemestrina
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.194	ENSMLEG00000035416	ZGPAT	100	79.806	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.976	ENSMAMG00000008266	zgpat	100	49.259	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.907	ENSMZEG00005021620	zgpat	100	50.186	Maylandia_zebra
MGP_CAROLIEiJ_G0024806	Zgpat	100	60.721	ENSMGAG00000006823	-	100	60.721	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024806	Zgpat	100	89.689	ENSMAUG00000017248	Zgpat	100	89.300	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024806	Zgpat	100	81.128	ENSMICG00000033269	ZGPAT	100	81.128	Microcebus_murinus
MGP_CAROLIEiJ_G0024806	Zgpat	100	90.856	ENSMOCG00000001324	Zgpat	100	90.467	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.460	ENSMMOG00000014951	zgpat	100	50.276	Mola_mola
MGP_CAROLIEiJ_G0024806	Zgpat	92	65.702	ENSMODG00000017016	-	88	65.702	Monodelphis_domestica
MGP_CAROLIEiJ_G0024806	Zgpat	100	47.818	ENSMALG00000006584	zgpat	100	47.909	Monopterus_albus
MGP_CAROLIEiJ_G0024806	Zgpat	100	98.913	ENSMUSG00000027582	Zgpat	100	98.444	Mus_musculus
MGP_CAROLIEiJ_G0024806	Zgpat	100	97.826	MGP_PahariEiJ_G0026254	Zgpat	100	97.826	Mus_pahari
MGP_CAROLIEiJ_G0024806	Zgpat	100	98.370	MGP_SPRETEiJ_G0025732	Zgpat	100	98.370	Mus_spretus
MGP_CAROLIEiJ_G0024806	Zgpat	100	73.792	ENSMLUG00000005264	-	100	73.792	Myotis_lucifugus
MGP_CAROLIEiJ_G0024806	Zgpat	79	87.586	ENSNGAG00000014626	-	100	88.298	Nannospalax_galili
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.502	ENSNBRG00000021521	zgpat	100	48.972	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024806	Zgpat	100	76.836	ENSNLEG00000010146	ZGPAT	100	76.460	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024806	Zgpat	86	57.018	ENSMEUG00000011946	-	100	57.333	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024806	Zgpat	83	71.711	ENSOPRG00000002115	-	100	73.684	Ochotona_princeps
MGP_CAROLIEiJ_G0024806	Zgpat	100	81.359	ENSODEG00000006562	ZGPAT	100	80.971	Octodon_degus
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.464	ENSONIG00000009365	zgpat	100	50.926	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024806	Zgpat	100	68.550	ENSOANG00000004932	-	100	68.550	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024806	Zgpat	84	74.026	ENSOCUG00000008687	-	100	73.964	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.673	ENSORLG00000000880	zgpat	100	52.533	Oryzias_latipes
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.667	ENSORLG00020004339	zgpat	100	52.345	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.296	ENSORLG00015018532	zgpat	100	52.345	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024806	Zgpat	100	52.434	ENSOMEG00000014655	zgpat	100	52.622	Oryzias_melastigma
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.799	ENSOGAG00000034509	ZGPAT	100	77.799	Otolemur_garnettii
MGP_CAROLIEiJ_G0024806	Zgpat	100	71.193	ENSOARG00000010128	ZGPAT	100	71.193	Ovis_aries
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.143	ENSPPAG00000027831	ZGPAT	100	77.563	Pan_paniscus
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.447	ENSPPRG00000024151	-	100	78.641	Panthera_pardus
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.447	ENSPTIG00000020325	-	100	78.641	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.337	ENSPTRG00000013750	ZGPAT	100	77.756	Pan_troglodytes
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.632	ENSPANG00000005904	ZGPAT	100	77.256	Papio_anubis
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.381	ENSPKIG00000012056	zgpat	100	51.386	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024806	Zgpat	100	62.127	ENSPSIG00000015801	-	100	62.313	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.331	ENSPMGG00000014856	zgpat	100	49.522	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	90.078	ENSPEMG00000015676	Zgpat	100	89.689	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024806	Zgpat	100	66.221	ENSPCIG00000017922	-	100	66.221	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.224	ENSPFOG00000010326	zgpat	100	51.296	Poecilia_formosa
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.132	ENSPLAG00000002135	zgpat	100	50.926	Poecilia_latipinna
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.224	ENSPMEG00000019064	zgpat	100	50.929	Poecilia_mexicana
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.566	ENSPREG00000010919	zgpat	100	50.940	Poecilia_reticulata
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.876	ENSPPYG00000011246	ZGPAT	100	78.295	Pongo_abelii
MGP_CAROLIEiJ_G0024806	Zgpat	70	68.120	ENSPCAG00000001883	-	100	68.120	Procavia_capensis
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.851	ENSPCOG00000012369	ZGPAT	100	80.851	Propithecus_coquereli
MGP_CAROLIEiJ_G0024806	Zgpat	100	68.665	ENSPVAG00000013489	-	100	68.472	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.667	ENSPNYG00000013216	zgpat	100	50.746	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024806	Zgpat	100	47.655	ENSPNAG00000012769	zgpat	100	48.127	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024806	Zgpat	100	92.996	ENSRNOG00000014235	Zgpat	100	92.996	Rattus_norvegicus
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.545	ENSRBIG00000034134	ZGPAT	100	79.961	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024806	Zgpat	100	80.583	ENSRROG00000039084	ZGPAT	100	80.194	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.599	ENSSBOG00000028752	ZGPAT	100	78.794	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024806	Zgpat	100	65.038	ENSSHAG00000017828	-	100	65.530	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024806	Zgpat	100	49.267	ENSSFOG00015000739	zgpat	100	49.449	Scleropages_formosus
MGP_CAROLIEiJ_G0024806	Zgpat	100	46.468	ENSSMAG00000006646	zgpat	100	47.770	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024806	Zgpat	100	48.237	ENSSDUG00000014684	zgpat	100	49.634	Seriola_dumerili
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.185	ENSSLDG00000019446	zgpat	100	49.817	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024806	Zgpat	100	62.177	ENSSPUG00000018516	-	100	62.044	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	50.749	ENSSPAG00000022473	zgpat	100	52.239	Stegastes_partitus
MGP_CAROLIEiJ_G0024806	Zgpat	100	78.058	ENSSSCG00000036595	-	100	78.058	Sus_scrofa
MGP_CAROLIEiJ_G0024806	Zgpat	100	66.603	ENSTGUG00000007115	-	100	66.603	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.210	ENSTRUG00000010488	zgpat	100	51.210	Takifugu_rubripes
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.341	ENSTNIG00000004165	zgpat	100	52.000	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024806	Zgpat	71	80.926	ENSTTRG00000012223	-	71	80.381	Tursiops_truncatus
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.864	ENSUAMG00000009298	-	100	78.058	Ursus_americanus
MGP_CAROLIEiJ_G0024806	Zgpat	100	77.670	ENSUMAG00000022033	-	100	77.476	Ursus_maritimus
MGP_CAROLIEiJ_G0024806	Zgpat	100	73.010	ENSVVUG00000015014	-	100	72.816	Vulpes_vulpes
MGP_CAROLIEiJ_G0024806	Zgpat	84	54.088	ENSXETG00000026151	zgpat	100	53.883	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024806	Zgpat	100	51.316	ENSXMAG00000004759	zgpat	100	51.316	Xiphophorus_maculatus