EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024833 (Gene tree)
Gene ID: 110291559
Gene Symbol: Mrps28
Alias: 1500012D08Rik
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 101294 bases
Position: chr3:4890090-4991383
Accession: 110291559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0056886	MRP-S35	PF10246.9	1.4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0056886	-	788	XM_021158772	MGP_CAROLIEiJ_P0056886	186 (aa)	XP_021014431	UPI000A31951C

Gene Model

Click here to download MGP_CAROLIEiJ_G0024833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024833	Mrps28	100	73.797	ENSG00000147586	MRPS28	99	87.255	Homo_sapiens
MGP_CAROLIEiJ_G0024833	Mrps28	60	83.929	ENSAMEG00000017516	MRPS28	97	83.929	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024833	Mrps28	97	53.226	ENSACIG00000007839	mrps28	100	55.851	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024833	Mrps28	70	61.765	ENSAOCG00000000705	mrps28	100	52.151	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024833	Mrps28	70	61.029	ENSAPEG00000016051	mrps28	100	51.613	Amphiprion_percula
MGP_CAROLIEiJ_G0024833	Mrps28	81	61.538	ENSATEG00000015295	mrps28	85	61.538	Anabas_testudineus
MGP_CAROLIEiJ_G0024833	Mrps28	57	82.075	ENSAPLG00000005666	MRPS28	99	82.075	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024833	Mrps28	56	63.462	ENSACLG00000003892	mrps28	90	63.462	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024833	Mrps28	83	62.581	ENSAMXG00000026324	mrps28	82	62.581	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024833	Mrps28	98	78.919	ENSBTAG00000001302	MRPS28	98	78.919	Bos_taurus
MGP_CAROLIEiJ_G0024833	Mrps28	51	52.632	WBGene00012830	mrps-28	55	52.632	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0024833	Mrps28	96	75.691	ENSCAFG00000008393	MRPS28	100	75.691	Canis_familiaris
MGP_CAROLIEiJ_G0024833	Mrps28	96	75.691	ENSCAFG00020017987	MRPS28	100	75.691	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024833	Mrps28	100	78.191	ENSCHIG00000018727	MRPS28	100	78.191	Capra_hircus
MGP_CAROLIEiJ_G0024833	Mrps28	70	73.077	ENSTSYG00000013531	-	100	73.077	Carlito_syrichta
MGP_CAROLIEiJ_G0024833	Mrps28	100	66.129	ENSTSYG00000031343	-	100	66.129	Carlito_syrichta
MGP_CAROLIEiJ_G0024833	Mrps28	56	81.905	ENSCAPG00000006948	-	95	81.905	Cavia_aperea
MGP_CAROLIEiJ_G0024833	Mrps28	56	82.857	ENSCPOG00000031885	-	95	82.857	Cavia_porcellus
MGP_CAROLIEiJ_G0024833	Mrps28	100	73.656	ENSCCAG00000022534	MRPS28	100	73.656	Cebus_capucinus
MGP_CAROLIEiJ_G0024833	Mrps28	51	89.362	ENSCLAG00000003227	-	95	83.810	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024833	Mrps28	100	72.043	ENSCHOG00000004885	MRPS28	100	72.043	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024833	Mrps28	58	80.556	ENSCPBG00000007206	MRPS28	54	80.556	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024833	Mrps28	100	88.172	ENSCGRG00001018741	Mrps28	100	88.172	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024833	Mrps28	62	92.241	ENSCGRG00000018208	Mrps28	100	92.241	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024833	Mrps28	55	67.961	ENSCSEG00000020947	mrps28	97	67.961	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024833	Mrps28	58	55.556	ENSCVAG00000007159	mrps28	88	55.556	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024833	Mrps28	93	58.857	ENSDARG00000041538	mrps28	97	58.857	Danio_rerio
MGP_CAROLIEiJ_G0024833	Mrps28	98	71.038	ENSDNOG00000017379	-	60	71.038	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024833	Mrps28	100	71.505	ENSDORG00000002762	Mrps28	100	71.505	Dipodomys_ordii
MGP_CAROLIEiJ_G0024833	Mrps28	80	47.297	FBgn0034361	mRpS28	72	47.297	Drosophila_melanogaster
MGP_CAROLIEiJ_G0024833	Mrps28	66	68.293	ENSEBUG00000010846	mrps28	73	66.406	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024833	Mrps28	100	74.468	ENSEASG00005020574	MRPS28	100	74.468	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024833	Mrps28	71	70.149	ENSECAG00000030797	-	83	70.149	Equus_caballus
MGP_CAROLIEiJ_G0024833	Mrps28	71	70.149	ENSECAG00000036837	-	80	70.149	Equus_caballus
MGP_CAROLIEiJ_G0024833	Mrps28	100	73.936	ENSECAG00000015430	MRPS28	100	73.936	Equus_caballus
MGP_CAROLIEiJ_G0024833	Mrps28	94	52.571	ENSEEUG00000013471	MRPS28	97	52.571	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024833	Mrps28	65	51.613	ENSELUG00000023151	mrps28	85	51.613	Esox_lucius
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.676	ENSFCAG00000032510	MRPS28	99	75.676	Felis_catus
MGP_CAROLIEiJ_G0024833	Mrps28	56	81.905	ENSFALG00000008608	MRPS28	80	81.905	Ficedula_albicollis
MGP_CAROLIEiJ_G0024833	Mrps28	100	75.401	ENSFDAG00000013634	MRPS28	98	75.401	Fukomys_damarensis
MGP_CAROLIEiJ_G0024833	Mrps28	59	57.798	ENSFHEG00000006233	mrps28	82	57.798	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024833	Mrps28	69	53.077	ENSGAFG00000014759	mrps28	98	44.809	Gambusia_affinis
MGP_CAROLIEiJ_G0024833	Mrps28	97	54.595	ENSGACG00000019939	mrps28	98	54.595	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024833	Mrps28	58	82.407	ENSGAGG00000025904	MRPS28	63	82.407	Gopherus_agassizii
MGP_CAROLIEiJ_G0024833	Mrps28	55	64.078	ENSHBUG00000014315	mrps28	88	64.078	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024833	Mrps28	100	75.806	ENSHGLG00000009986	MRPS28	81	75.806	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024833	Mrps28	100	75.806	ENSHGLG00100019258	MRPS28	81	75.806	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024833	Mrps28	65	55.556	ENSHCOG00000011561	mrps28	71	56.800	Hippocampus_comes
MGP_CAROLIEiJ_G0024833	Mrps28	70	63.235	ENSIPUG00000012566	mrps28	74	63.235	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024833	Mrps28	70	77.863	ENSSTOG00000015179	MRPS28	100	77.863	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024833	Mrps28	87	60.494	ENSJJAG00000023759	Mrps28	84	60.494	Jaculus_jaculus
MGP_CAROLIEiJ_G0024833	Mrps28	96	54.645	ENSKMAG00000006636	mrps28	88	55.738	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024833	Mrps28	97	55.556	ENSLACG00000014702	MRPS28	100	56.085	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024833	Mrps28	97	57.513	ENSLOCG00000017359	mrps28	100	57.513	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024833	Mrps28	50	77.419	ENSMAMG00000017782	mrps28	80	77.419	Mastacembelus_armatus
MGP_CAROLIEiJ_G0024833	Mrps28	56	63.462	ENSMZEG00005014997	mrps28	90	63.462	Maylandia_zebra
MGP_CAROLIEiJ_G0024833	Mrps28	56	63.462	ENSMZEG00005010529	-	90	63.462	Maylandia_zebra
MGP_CAROLIEiJ_G0024833	Mrps28	56	82.692	ENSMGAG00000011622	MRPS28	100	82.692	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024833	Mrps28	100	88.710	ENSMAUG00000009465	Mrps28	100	88.710	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024833	Mrps28	100	76.344	ENSMICG00000044873	MRPS28	100	76.344	Microcebus_murinus
MGP_CAROLIEiJ_G0024833	Mrps28	100	89.785	ENSMOCG00000021930	Mrps28	100	89.785	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024833	Mrps28	97	68.306	ENSMODG00000006621	MRPS28	97	68.306	Monodelphis_domestica
MGP_CAROLIEiJ_G0024833	Mrps28	59	72.727	ENSMALG00000006494	mrps28	83	72.727	Monopterus_albus
MGP_CAROLIEiJ_G0024833	Mrps28	100	98.925	ENSMUSG00000040269	Mrps28	100	98.925	Mus_musculus
MGP_CAROLIEiJ_G0024833	Mrps28	100	95.699	MGP_PahariEiJ_G0026281	Mrps28	100	95.699	Mus_pahari
MGP_CAROLIEiJ_G0024833	Mrps28	100	98.925	MGP_SPRETEiJ_G0025763	Mrps28	100	98.925	Mus_spretus
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.676	ENSMPUG00000001853	MRPS28	99	75.676	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024833	Mrps28	98	76.087	ENSMLUG00000015175	MRPS28	98	76.087	Myotis_lucifugus
MGP_CAROLIEiJ_G0024833	Mrps28	100	80.645	ENSNGAG00000000216	Mrps28	100	80.645	Nannospalax_galili
MGP_CAROLIEiJ_G0024833	Mrps28	97	48.936	ENSNBRG00000021393	mrps28	100	48.936	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024833	Mrps28	98	67.760	ENSMEUG00000007676	MRPS28	100	67.760	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024833	Mrps28	98	78.142	ENSODEG00000005701	MRPS28	98	78.142	Octodon_degus
MGP_CAROLIEiJ_G0024833	Mrps28	76	54.110	ENSONIG00000020758	mrps28	100	47.644	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024833	Mrps28	94	78.857	ENSOCUG00000000867	MRPS28	99	78.857	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024833	Mrps28	80	55.346	ENSORLG00000026843	mrps28	89	55.346	Oryzias_latipes
MGP_CAROLIEiJ_G0024833	Mrps28	80	55.975	ENSORLG00020022089	mrps28	89	55.975	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024833	Mrps28	70	55.224	ENSOMEG00000008250	mrps28	76	55.224	Oryzias_melastigma
MGP_CAROLIEiJ_G0024833	Mrps28	100	76.344	ENSOGAG00000016599	MRPS28	100	76.344	Otolemur_garnettii
MGP_CAROLIEiJ_G0024833	Mrps28	98	76.216	ENSPPRG00000009220	MRPS28	99	76.216	Panthera_pardus
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.676	ENSPTIG00000019934	MRPS28	99	75.676	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024833	Mrps28	58	76.852	ENSPKIG00000022304	mrps28	86	76.852	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024833	Mrps28	91	51.149	ENSPMGG00000008007	-	92	51.149	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024833	Mrps28	100	90.323	ENSPEMG00000012338	Mrps28	100	90.323	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024833	Mrps28	55	76.471	ENSPMAG00000002015	mrps28	91	76.471	Petromyzon_marinus
MGP_CAROLIEiJ_G0024833	Mrps28	98	64.481	ENSPCIG00000026795	MRPS28	99	64.481	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024833	Mrps28	99	45.263	ENSPFOG00000020828	mrps28	100	45.263	Poecilia_formosa
MGP_CAROLIEiJ_G0024833	Mrps28	99	45.263	ENSPLAG00000005387	mrps28	100	45.263	Poecilia_latipinna
MGP_CAROLIEiJ_G0024833	Mrps28	91	47.953	ENSPMEG00000022332	mrps28	96	47.953	Poecilia_mexicana
MGP_CAROLIEiJ_G0024833	Mrps28	73	53.676	ENSPREG00000005690	mrps28	78	53.676	Poecilia_reticulata
MGP_CAROLIEiJ_G0024833	Mrps28	100	72.043	ENSPPYG00000018694	MRPS28	100	72.043	Pongo_abelii
MGP_CAROLIEiJ_G0024833	Mrps28	62	87.826	ENSPCAG00000000404	MRPS28	99	87.826	Procavia_capensis
MGP_CAROLIEiJ_G0024833	Mrps28	100	77.419	ENSPCOG00000003866	MRPS28	100	77.419	Propithecus_coquereli
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.956	ENSPVAG00000007815	MRPS28	99	75.956	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024833	Mrps28	56	63.462	ENSPNYG00000016499	mrps28	90	63.462	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024833	Mrps28	82	57.927	ENSPNAG00000018621	mrps28	88	57.927	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024833	Mrps28	100	94.624	ENSRNOG00000032630	Mrps28	99	94.624	Rattus_norvegicus
MGP_CAROLIEiJ_G0024833	Mrps28	100	73.656	ENSSBOG00000028198	MRPS28	100	73.656	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024833	Mrps28	100	51.707	ENSSFOG00015004723	mrps28	88	55.556	Scleropages_formosus
MGP_CAROLIEiJ_G0024833	Mrps28	69	59.701	ENSSMAG00000021042	mrps28	90	55.484	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024833	Mrps28	87	56.287	ENSSDUG00000021722	mrps28	92	56.287	Seriola_dumerili
MGP_CAROLIEiJ_G0024833	Mrps28	70	61.481	ENSSLDG00000013261	mrps28	83	57.792	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024833	Mrps28	100	70.968	ENSSARG00000007429	MRPS28	99	70.968	Sorex_araneus
MGP_CAROLIEiJ_G0024833	Mrps28	93	55.747	ENSSPUG00000017502	MRPS28	95	55.747	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024833	Mrps28	70	59.559	ENSSPAG00000003194	mrps28	98	53.005	Stegastes_partitus
MGP_CAROLIEiJ_G0024833	Mrps28	100	77.660	ENSSSCG00000037782	MRPS28	100	77.660	Sus_scrofa
MGP_CAROLIEiJ_G0024833	Mrps28	92	50.867	ENSTRUG00000012758	mrps28	94	50.867	Takifugu_rubripes
MGP_CAROLIEiJ_G0024833	Mrps28	100	71.505	ENSTBEG00000010380	MRPS28	100	71.505	Tupaia_belangeri
MGP_CAROLIEiJ_G0024833	Mrps28	100	76.344	ENSTTRG00000000087	MRPS28	100	76.344	Tursiops_truncatus
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.676	ENSUAMG00000018127	MRPS28	99	75.676	Ursus_americanus
MGP_CAROLIEiJ_G0024833	Mrps28	98	75.676	ENSUMAG00000014927	MRPS28	99	75.676	Ursus_maritimus
MGP_CAROLIEiJ_G0024833	Mrps28	100	77.957	ENSVPAG00000000652	MRPS28	100	77.957	Vicugna_pacos
MGP_CAROLIEiJ_G0024833	Mrps28	96	76.536	ENSVVUG00000000384	MRPS28	100	76.536	Vulpes_vulpes
MGP_CAROLIEiJ_G0024833	Mrps28	62	58.621	ENSXCOG00000015251	mrps28	65	59.016	Xiphophorus_couchianus