EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024863 (Gene tree)
Gene ID: 110290717
Gene Symbol: Ythdf3
Alias: 9130022A11Rik
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 29700 bases
Position: chr3:11675800-11705499
Accession: 110290717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0056975	YTH	PF04146.15	4.8e-40	1	1
MGP_CAROLIEiJ_P0056977	YTH	PF04146.15	4.8e-40	1	1
MGP_CAROLIEiJ_P0056978	YTH	PF04146.15	4.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0056978	-	4946	XM_021157368	MGP_CAROLIEiJ_P0056978	596 (aa)	XP_021013027	UPI0000435134
MGP_CAROLIEiJ_T0056975	-	5120	XM_021157369	MGP_CAROLIEiJ_P0056975	585 (aa)	XP_021013028	UPI00001F05BB
MGP_CAROLIEiJ_T0056977	-	3204	-	MGP_CAROLIEiJ_P0056977	588 (aa)	-	UPI000A3156AF
MGP_CAROLIEiJ_T0056976	-	724	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSG00000185728	YTHDF3	100	99.099	Homo_sapiens
MGP_CAROLIEiJ_G0024863	Ythdf3	100	97.778	ENSAMEG00000018113	YTHDF3	100	97.778	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024863	Ythdf3	99	69.416	ENSATEG00000011478	ythdf3	94	93.514	Anabas_testudineus
MGP_CAROLIEiJ_G0024863	Ythdf3	98	93.520	ENSAPLG00000011329	YTHDF3	97	92.335	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024863	Ythdf3	100	92.137	ENSACAG00000016837	YTHDF3	100	91.453	Anolis_carolinensis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSANAG00000037920	YTHDF3	100	98.632	Aotus_nancymaae
MGP_CAROLIEiJ_G0024863	Ythdf3	98	79.223	ENSAMXG00000030366	ythdf3	97	76.531	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.129	ENSBTAG00000018557	YTHDF3	100	98.129	Bos_taurus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSCJAG00000009217	YTHDF3	100	98.632	Callithrix_jacchus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.469	ENSCAFG00000007215	YTHDF3	100	98.469	Canis_familiaris
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSCAFG00020015995	YTHDF3	100	98.502	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSCHIG00000026460	YTHDF3	100	98.462	Capra_hircus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.299	ENSTSYG00000009117	YTHDF3	100	98.299	Carlito_syrichta
MGP_CAROLIEiJ_G0024863	Ythdf3	99	97.747	ENSCAPG00000014006	YTHDF3	100	97.747	Cavia_aperea
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSCPOG00000002961	YTHDF3	100	98.462	Cavia_porcellus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSCCAG00000022316	YTHDF3	100	98.502	Cebus_capucinus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSCATG00000038669	YTHDF3	100	98.803	Cercocebus_atys
MGP_CAROLIEiJ_G0024863	Ythdf3	99	98.614	ENSCLAG00000002515	YTHDF3	100	98.614	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSCSAG00000014280	YTHDF3	100	98.803	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	96.034	ENSCHOG00000010194	YTHDF3	97	97.513	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024863	Ythdf3	100	92.491	ENSCPBG00000021405	YTHDF3	100	91.809	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSCANG00000032631	YTHDF3	100	98.803	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.490	ENSCGRG00001021204	Ythdf3	100	99.490	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.980	ENSCGRG00000005613	-	100	98.980	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024863	Ythdf3	68	68.101	ENSCGRG00000008289	-	64	73.932	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024863	Ythdf3	100	78.409	ENSDARG00000057939	ythdf3	100	76.268	Danio_rerio
MGP_CAROLIEiJ_G0024863	Ythdf3	100	97.284	ENSDNOG00000037156	YTHDF3	100	97.284	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.120	ENSDORG00000014699	Ythdf3	100	98.120	Dipodomys_ordii
MGP_CAROLIEiJ_G0024863	Ythdf3	97	98.070	ENSETEG00000007144	YTHDF3	100	98.070	Echinops_telfairi
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSEASG00005016224	YTHDF3	100	98.632	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.639	ENSECAG00000011093	YTHDF3	100	98.639	Equus_caballus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.469	ENSFCAG00000025314	YTHDF3	100	98.469	Felis_catus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	93.080	ENSFALG00000005503	YTHDF3	100	92.322	Ficedula_albicollis
MGP_CAROLIEiJ_G0024863	Ythdf3	99	98.440	ENSFDAG00000002735	YTHDF3	100	98.440	Fukomys_damarensis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	93.675	ENSGALG00000039774	YTHDF3	100	92.650	Gallus_gallus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	92.321	ENSGAGG00000003851	YTHDF3	100	91.638	Gopherus_agassizii
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.639	ENSGGOG00000027681	YTHDF3	100	98.876	Gorilla_gorilla
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSHGLG00000009954	YTHDF3	100	98.462	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024863	Ythdf3	99	98.440	ENSHGLG00100012403	YTHDF3	100	98.440	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024863	Ythdf3	100	79.801	ENSIPUG00000014157	YTHDF1	97	78.475	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.299	ENSSTOG00000027792	YTHDF3	100	98.299	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	98.614	ENSJJAG00000017742	Ythdf3	100	98.614	Jaculus_jaculus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	83.139	ENSLACG00000002281	YTHDF3	100	83.139	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024863	Ythdf3	100	96.141	ENSLAFG00000016052	YTHDF3	100	96.141	Loxodonta_africana
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSMFAG00000043451	YTHDF3	100	98.876	Macaca_fascicularis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSMMUG00000006729	YTHDF3	100	98.876	Macaca_mulatta
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSMNEG00000031200	YTHDF3	100	98.876	Macaca_nemestrina
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSMLEG00000036763	YTHDF3	100	98.803	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	92.821	ENSMGAG00000011168	YTHDF3	100	91.795	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024863	Ythdf3	66	95.373	ENSMAUG00000012560	Ythdf3	97	94.444	Mesocricetus_auratus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.980	ENSMICG00000036869	-	100	98.980	Microcebus_murinus
MGP_CAROLIEiJ_G0024863	Ythdf3	68	77.468	ENSMICG00000009379	-	100	75.443	Microcebus_murinus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.639	ENSMOCG00000011947	Ythdf3	100	98.639	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024863	Ythdf3	96	67.376	ENSMMOG00000003402	ythdf3	92	89.894	Mola_mola
MGP_CAROLIEiJ_G0024863	Ythdf3	100	96.758	ENSMODG00000008255	YTHDF3	100	96.758	Monodelphis_domestica
MGP_CAROLIEiJ_G0024863	Ythdf3	98	71.107	ENSMALG00000000147	ythdf3	92	92.432	Monopterus_albus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	100.000	ENSMUSG00000047213	Ythdf3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.329	MGP_PahariEiJ_G0026310	Ythdf3	100	99.329	Mus_pahari
MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.832	MGP_SPRETEiJ_G0025794	Ythdf3	100	99.832	Mus_spretus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSMPUG00000009857	YTHDF3	100	98.462	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024863	Ythdf3	99	98.107	ENSMLUG00000006541	YTHDF3	99	98.107	Myotis_lucifugus
MGP_CAROLIEiJ_G0024863	Ythdf3	92	98.321	ENSNGAG00000018434	Ythdf3	96	98.321	Nannospalax_galili
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSNLEG00000003872	YTHDF3	100	98.632	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024863	Ythdf3	99	96.213	ENSMEUG00000011285	YTHDF3	100	96.213	Notamacropus_eugenii
MGP_CAROLIEiJ_G0024863	Ythdf3	99	97.574	ENSODEG00000002033	YTHDF3	100	97.574	Octodon_degus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	92.943	ENSOANG00000005053	YTHDF3	100	90.706	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	97.148	ENSOCUG00000008723	YTHDF3	100	97.148	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	74.919	ENSOMEG00000008212	ythdf3	99	75.472	Oryzias_melastigma
MGP_CAROLIEiJ_G0024863	Ythdf3	99	97.945	ENSOGAG00000002302	YTHDF3	99	97.945	Otolemur_garnettii
MGP_CAROLIEiJ_G0024863	Ythdf3	98	98.087	ENSOARG00000016882	YTHDF3	98	98.087	Ovis_aries
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSPPAG00000043483	YTHDF3	100	98.462	Pan_paniscus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.469	ENSPPRG00000004665	YTHDF3	100	98.469	Panthera_pardus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.469	ENSPTIG00000021537	YTHDF3	100	98.502	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSPTRG00000049135	YTHDF3	100	98.632	Pan_troglodytes
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.803	ENSPANG00000008030	YTHDF3	100	98.803	Papio_anubis
MGP_CAROLIEiJ_G0024863	Ythdf3	99	80.172	ENSPKIG00000008298	ythdf3	96	80.319	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024863	Ythdf3	100	94.539	ENSPSIG00000015861	YTHDF3	100	93.515	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.830	ENSPEMG00000020975	Ythdf3	100	99.830	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024863	Ythdf3	100	96.928	ENSPCIG00000017629	YTHDF3	100	96.928	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024863	Ythdf3	91	98.936	ENSPPYG00000018626	YTHDF3	100	97.579	Pongo_abelii
MGP_CAROLIEiJ_G0024863	Ythdf3	99	97.414	ENSPCAG00000016282	YTHDF3	100	97.414	Procavia_capensis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.980	ENSPCOG00000004856	YTHDF3	100	98.980	Propithecus_coquereli
MGP_CAROLIEiJ_G0024863	Ythdf3	85	99.468	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024863	Ythdf3	87	86.522	ENSPNYG00000002949	ythdf3	96	87.156	Pundamilia_nyererei
MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.829	ENSRNOG00000010084	Ythdf3	100	99.829	Rattus_norvegicus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSRBIG00000036465	YTHDF3	100	98.632	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	ENSRROG00000035231	YTHDF3	100	98.462	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.632	ENSSBOG00000035287	YTHDF3	100	98.632	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024863	Ythdf3	100	96.422	ENSSHAG00000009482	YTHDF3	100	96.422	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024863	Ythdf3	97	98.421	ENSSARG00000007626	YTHDF3	99	98.421	Sorex_araneus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	92.586	ENSSPUG00000009390	YTHDF3	98	91.901	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024863	Ythdf3	91	98.689	ENSSSCG00000033144	YTHDF3	100	98.689	Sus_scrofa
MGP_CAROLIEiJ_G0024863	Ythdf3	98	93.194	ENSTGUG00000011243	YTHDF3	98	92.157	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024863	Ythdf3	80	97.867	ENSTBEG00000005747	YTHDF3	81	97.867	Tupaia_belangeri
MGP_CAROLIEiJ_G0024863	Ythdf3	99	89.138	ENSTTRG00000014564	YTHDF3	98	88.908	Tursiops_truncatus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.639	ENSUAMG00000012624	YTHDF3	100	98.639	Ursus_americanus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.639	ENSUMAG00000014104	YTHDF3	100	98.639	Ursus_maritimus
MGP_CAROLIEiJ_G0024863	Ythdf3	99	85.542	ENSVPAG00000008104	YTHDF3	98	84.359	Vicugna_pacos
MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.469	ENSVVUG00000018384	YTHDF3	100	98.469	Vulpes_vulpes
MGP_CAROLIEiJ_G0024863	Ythdf3	100	87.863	ENSXETG00000021659	ythdf3	100	88.205	Xenopus_tropicalis
MGP_CAROLIEiJ_G0024863	Ythdf3	99	74.252	ENSXCOG00000009687	ythdf3	99	76.117	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024863	Ythdf3	100	75.772	ENSXMAG00000009698	ythdf3	99	76.460	Xiphophorus_maculatus