EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024864 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
1976 bases
Position
chr3:11796046-11798021
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0056979PABPPF00658.181.2e-2711
MGP_CAROLIEiJ_P0056979RRM_5PF13893.64.4e-0612
MGP_CAROLIEiJ_P0056979RRM_5PF13893.64.4e-0622
MGP_CAROLIEiJ_P0056979RRM_1PF00076.223e-6413
MGP_CAROLIEiJ_P0056979RRM_1PF00076.223e-6423
MGP_CAROLIEiJ_P0056979RRM_1PF00076.223e-6433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0056979-1894-MGP_CAROLIEiJ_P0056979559 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0024864's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024864's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0024864-9855.971MGP_CAROLIEiJ_G0024627Pabpc1l9954.181
MGP_CAROLIEiJ_G0024864-9960.585MGP_CAROLIEiJ_G0021058Pabpc69960.690
MGP_CAROLIEiJ_G0024864-5666.667MGP_CAROLIEiJ_G0024968Pabpc4l9769.608
MGP_CAROLIEiJ_G0024864-9861.728MGP_CAROLIEiJ_G0022217Pabpc29760.808
MGP_CAROLIEiJ_G0024864-5537.349MGP_CAROLIEiJ_G0032305Celf66037.349
MGP_CAROLIEiJ_G0024864-5237.838MGP_CAROLIEiJ_G0022058Celf45735.526
MGP_CAROLIEiJ_G0024864-10084.915MGP_CAROLIEiJ_G0026435-10097.938
MGP_CAROLIEiJ_G0024864-5436.905MGP_CAROLIEiJ_G0015643-7136.585
MGP_CAROLIEiJ_G0024864-5762.838MGP_CAROLIEiJ_G0033367Pabpc59462.838
MGP_CAROLIEiJ_G0024864-9884.314MGP_CAROLIEiJ_G0019740Pabpc19884.314
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024864-10084.696ENSG00000090621PABPC498100.000Homo_sapiens
MGP_CAROLIEiJ_G0024864-9974.054ENSAPOG00000001161pabpc49971.088Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024864-9951.423ENSAMEG00000015083-8850.446Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024864-10083.729ENSAMEG00000011535-9983.729Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024864-10073.158ENSACIG00000023343pabpc49972.617Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024864-9974.054ENSAOCG00000021529pabpc49971.088Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024864-9974.054ENSAPEG00000019196pabpc49971.088Amphiprion_percula
MGP_CAROLIEiJ_G0024864-9972.939ENSATEG00000007402pabpc49971.280Anabas_testudineus
MGP_CAROLIEiJ_G0024864-9978.075ENSAPLG00000009729-10078.075Anas_platyrhynchos
MGP_CAROLIEiJ_G0024864-9975.699ENSACAG00000002544PABPC410075.699Anolis_carolinensis
MGP_CAROLIEiJ_G0024864-10083.898ENSANAG00000025079PABPC49983.898Aotus_nancymaae
MGP_CAROLIEiJ_G0024864-10072.887ENSACLG00000019558pabpc49970.918Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024864-9967.145ENSAMXG00000018779pabpc49963.300Astyanax_mexicanus
MGP_CAROLIEiJ_G0024864-5291.753ENSBTAG00000048536-9291.753Bos_taurus
MGP_CAROLIEiJ_G0024864-10084.348ENSBTAG00000017125PABPC49984.522Bos_taurus
MGP_CAROLIEiJ_G0024864-10083.390ENSCJAG00000002512-9983.390Callithrix_jacchus
MGP_CAROLIEiJ_G0024864-7365.283ENSCJAG00000045953-9266.016Callithrix_jacchus
MGP_CAROLIEiJ_G0024864-10083.729ENSCAFG00000003081PABPC49983.096Canis_familiaris
MGP_CAROLIEiJ_G0024864-10083.729ENSCAFG00020004161PABPC49983.729Canis_lupus_dingo
MGP_CAROLIEiJ_G0024864-10084.068ENSCHIG00000019398-9984.068Capra_hircus
MGP_CAROLIEiJ_G0024864-10071.936ENSCHIG00000023385-9871.936Capra_hircus
MGP_CAROLIEiJ_G0024864-10083.729ENSTSYG00000006532PABPC49983.729Carlito_syrichta
MGP_CAROLIEiJ_G0024864-10084.068ENSCAPG00000015984PABPC49984.068Cavia_aperea
MGP_CAROLIEiJ_G0024864-10084.068ENSCPOG00000009552PABPC49984.068Cavia_porcellus
MGP_CAROLIEiJ_G0024864-10083.559ENSCCAG00000037306PABPC49983.559Cebus_capucinus
MGP_CAROLIEiJ_G0024864-10083.898ENSCATG00000042164PABPC49983.898Cercocebus_atys
MGP_CAROLIEiJ_G0024864-10083.559ENSCLAG00000011899PABPC49983.559Chinchilla_lanigera
MGP_CAROLIEiJ_G0024864-10083.898ENSCSAG00000001135PABPC49983.898Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024864-8093.275ENSCHOG00000005327PABPC47790.423Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024864-9977.540ENSCPBG00000001038PABPC49977.540Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024864-10083.729ENSCANG00000034177PABPC410083.729Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024864-9883.477ENSCGRG00001018166Pabpc49982.264Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024864-9884.779ENSCGRG00000009777Pabpc49983.507Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024864-10072.935ENSCSEG00000000130pabpc49971.256Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024864-10073.805ENSCVAG00000019246pabpc410073.333Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024864-9972.359ENSDARG00000059259pabpc49871.739Danio_rerio
MGP_CAROLIEiJ_G0024864-10083.274ENSDNOG00000018444-10083.274Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024864-10085.217ENSDORG00000011581Pabpc49984.801Dipodomys_ordii
MGP_CAROLIEiJ_G0024864-9654.613ENSETEG00000009172-9954.463Echinops_telfairi
MGP_CAROLIEiJ_G0024864-9679.150ENSETEG00000018453-7579.352Echinops_telfairi
MGP_CAROLIEiJ_G0024864-9765.419ENSEBUG00000013782pabpc49965.157Eptatretus_burgeri
MGP_CAROLIEiJ_G0024864-9867.864ENSEBUG00000000992pabpc49867.864Eptatretus_burgeri
MGP_CAROLIEiJ_G0024864-10084.068ENSEASG00005014119PABPC49984.068Equus_asinus_asinus
MGP_CAROLIEiJ_G0024864-10084.068ENSECAG00000009396PABPC49984.068Equus_caballus
MGP_CAROLIEiJ_G0024864-10081.726ENSEEUG00000002962PABPC49981.726Erinaceus_europaeus
MGP_CAROLIEiJ_G0024864-9972.987ENSELUG00000003195pabpc49771.354Esox_lucius
MGP_CAROLIEiJ_G0024864-10083.898ENSFCAG00000015254-9983.898Felis_catus
MGP_CAROLIEiJ_G0024864-9976.049ENSFALG00000000543PABPC49976.049Ficedula_albicollis
MGP_CAROLIEiJ_G0024864-9955.085ENSFDAG00000010581-9953.310Fukomys_damarensis
MGP_CAROLIEiJ_G0024864-10083.898ENSFDAG00000020016-9983.898Fukomys_damarensis
MGP_CAROLIEiJ_G0024864-10074.028ENSFHEG00000007548pabpc49973.380Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024864-10072.174ENSGMOG00000019025pabpc49868.844Gadus_morhua
MGP_CAROLIEiJ_G0024864-9977.718ENSGALG00000003800PABPC49977.718Gallus_gallus
MGP_CAROLIEiJ_G0024864-10086.550ENSGAFG00000018195pabpc49594.068Gambusia_affinis
MGP_CAROLIEiJ_G0024864-10072.408ENSGACG00000007179pabpc49971.552Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024864-9976.348ENSGAGG00000001888PABPC49976.348Gopherus_agassizii
MGP_CAROLIEiJ_G0024864-10083.729ENSGGOG00000004002PABPC49983.729Gorilla_gorilla
MGP_CAROLIEiJ_G0024864-10073.063ENSHBUG00000020206pabpc49971.088Haplochromis_burtoni
MGP_CAROLIEiJ_G0024864-10085.043ENSHGLG00000011162PABPC49984.629Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024864-10085.043ENSHGLG00100001580PABPC49984.629Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024864-10071.781ENSHCOG00000012694pabpc49970.345Hippocampus_comes
MGP_CAROLIEiJ_G0024864-9872.272ENSIPUG00000016620pabpc49870.154Ictalurus_punctatus
MGP_CAROLIEiJ_G0024864-10084.870ENSSTOG00000010416PABPC49984.456Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024864-10082.578ENSJJAG00000007781Pabpc49982.404Jaculus_jaculus
MGP_CAROLIEiJ_G0024864-9973.084ENSKMAG00000013597pabpc49873.310Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024864-10071.777ENSLBEG00000013654pabpc49870.508Labrus_bergylta
MGP_CAROLIEiJ_G0024864-9975.398ENSLACG00000011907PABPC49975.398Latimeria_chalumnae
MGP_CAROLIEiJ_G0024864-10074.028ENSLOCG00000001877pabpc49872.461Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024864-10083.898ENSLAFG00000000151PABPC49983.898Loxodonta_africana
MGP_CAROLIEiJ_G0024864-10083.898ENSMFAG00000041481PABPC49983.898Macaca_fascicularis
MGP_CAROLIEiJ_G0024864-10083.898ENSMMUG00000007497PABPC49983.898Macaca_mulatta
MGP_CAROLIEiJ_G0024864-10083.729ENSMNEG00000043054PABPC49983.729Macaca_nemestrina
MGP_CAROLIEiJ_G0024864-10083.898ENSMLEG00000040716PABPC49983.898Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024864-9973.036ENSMAMG00000010025pabpc49870.427Mastacembelus_armatus
MGP_CAROLIEiJ_G0024864-10072.711ENSMZEG00005006141pabpc49872.163Maylandia_zebra
MGP_CAROLIEiJ_G0024864-9975.601ENSMGAG00000005408PABPC49975.601Meleagris_gallopavo
MGP_CAROLIEiJ_G0024864-7092.929ENSMAUG00000019763-6692.929Mesocricetus_auratus
MGP_CAROLIEiJ_G0024864-5985.890ENSMAUG00000001295-7585.890Mesocricetus_auratus
MGP_CAROLIEiJ_G0024864-8781.225ENSMICG00000016633-9981.423Microcebus_murinus
MGP_CAROLIEiJ_G0024864-10072.291ENSMICG00000036729-10071.581Microcebus_murinus
MGP_CAROLIEiJ_G0024864-9983.904ENSMOCG00000006763Pabpc49983.390Microtus_ochrogaster
MGP_CAROLIEiJ_G0024864-10072.840ENSMMOG00000002363pabpc49971.280Mola_mola
MGP_CAROLIEiJ_G0024864-5669.872ENSMODG00000018051-8969.872Monodelphis_domestica
MGP_CAROLIEiJ_G0024864-9875.606ENSMODG00000017657-9975.424Monodelphis_domestica
MGP_CAROLIEiJ_G0024864-9972.809ENSMALG00000011017pabpc49970.000Monopterus_albus
MGP_CAROLIEiJ_G0024864-10085.913ENSMUSG00000011257Pabpc49896.907Mus_musculus
MGP_CAROLIEiJ_G0024864-10084.576MGP_PahariEiJ_G0028765Pabpc410097.938Mus_pahari
MGP_CAROLIEiJ_G0024864-10075.260MGP_SPRETEiJ_G0027415Pabpc410096.907Mus_spretus
MGP_CAROLIEiJ_G0024864-10083.898ENSMPUG00000014414-9983.898Mustela_putorius_furo
MGP_CAROLIEiJ_G0024864-9647.786ENSMPUG00000006836-9046.765Mustela_putorius_furo
MGP_CAROLIEiJ_G0024864-10082.801ENSMLUG00000012068PABPC49982.801Myotis_lucifugus
MGP_CAROLIEiJ_G0024864-10085.017ENSNGAG00000018292Pabpc49985.017Nannospalax_galili
MGP_CAROLIEiJ_G0024864-5783.436ENSNBRG00000010047-6983.436Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024864-5689.726ENSNBRG00000009708pabpc49889.726Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024864-10084.870ENSNLEG00000011928PABPC49984.456Nomascus_leucogenys
MGP_CAROLIEiJ_G0024864-7292.982ENSOPRG00000011984PABPC47692.982Ochotona_princeps
MGP_CAROLIEiJ_G0024864-9672.951ENSODEG00000017434-10072.967Octodon_degus
MGP_CAROLIEiJ_G0024864-10083.051ENSODEG00000006592-9983.051Octodon_degus
MGP_CAROLIEiJ_G0024864-5381.373ENSODEG00000013457-9981.373Octodon_degus
MGP_CAROLIEiJ_G0024864-10073.063ENSONIG00000008176pabpc49970.748Oreochromis_niloticus
MGP_CAROLIEiJ_G0024864-9977.897ENSOANG00000010001PABPC49977.897Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024864-9583.096ENSOCUG00000000562PABPC48883.096Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024864-9988.142ENSORLG00000017479pabpc48288.142Oryzias_latipes
MGP_CAROLIEiJ_G0024864-9988.142ENSORLG00020018644pabpc48288.142Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024864-9988.142ENSORLG00015015042pabpc48288.142Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024864-9974.234ENSOMEG00000014410pabpc48785.387Oryzias_melastigma
MGP_CAROLIEiJ_G0024864-10083.564ENSOGAG00000004067PABPC49983.333Otolemur_garnettii
MGP_CAROLIEiJ_G0024864-10084.068ENSOARG00000020060PABPC49984.068Ovis_aries
MGP_CAROLIEiJ_G0024864-10083.729ENSPPAG00000043625PABPC49983.729Pan_paniscus
MGP_CAROLIEiJ_G0024864-10083.898ENSPPRG00000024727PABPC49983.898Panthera_pardus
MGP_CAROLIEiJ_G0024864-10083.898ENSPTIG00000005829PABPC49983.898Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024864-10083.729ENSPTRG00000000573PABPC49983.729Pan_troglodytes
MGP_CAROLIEiJ_G0024864-10083.898ENSPANG00000009484PABPC49983.898Papio_anubis
MGP_CAROLIEiJ_G0024864-9973.205ENSPKIG00000025356pabpc49772.318Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024864-9976.522ENSPSIG00000016892PABPC49977.540Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024864-10072.776ENSPMGG00000009073pabpc49872.291Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024864-10082.862ENSPEMG00000024193-9982.862Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024864-10083.220ENSPEMG00000023569-9983.220Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024864-8763.281ENSPMAG00000002836pabpc49962.984Petromyzon_marinus
MGP_CAROLIEiJ_G0024864-9263.825ENSPMAG00000007885pabpc49964.358Petromyzon_marinus
MGP_CAROLIEiJ_G0024864-9888.596ENSPCIG00000020674PABPC49688.596Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024864-10072.920ENSPFOG00000002682pabpc49972.902Poecilia_formosa
MGP_CAROLIEiJ_G0024864-10072.743ENSPLAG00000010112pabpc49972.727Poecilia_latipinna
MGP_CAROLIEiJ_G0024864-9973.466ENSPMEG00000019739pabpc49973.077Poecilia_mexicana
MGP_CAROLIEiJ_G0024864-10073.451ENSPREG00000001589pabpc49972.902Poecilia_reticulata
MGP_CAROLIEiJ_G0024864-10083.729ENSPPYG00000001506PABPC49983.729Pongo_abelii
MGP_CAROLIEiJ_G0024864-10078.644ENSPCAG00000003341PABPC49978.644Procavia_capensis
MGP_CAROLIEiJ_G0024864-10083.249ENSPCOG00000023725-9983.418Propithecus_coquereli
MGP_CAROLIEiJ_G0024864-10072.178ENSPCOG00000025882-9189.109Propithecus_coquereli
MGP_CAROLIEiJ_G0024864-10083.390ENSPVAG00000002187PABPC49983.390Pteropus_vampyrus
MGP_CAROLIEiJ_G0024864-10072.887ENSPNYG00000006134pabpc49970.918Pundamilia_nyererei
MGP_CAROLIEiJ_G0024864-10073.016ENSPNAG00000024355pabpc49869.932Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024864-10083.391ENSRNOG00000028592AABR07035074.19983.391Rattus_norvegicus
MGP_CAROLIEiJ_G0024864-10085.217ENSRNOG00000015642Pabpc49985.217Rattus_norvegicus
MGP_CAROLIEiJ_G0024864-10083.898ENSRBIG00000039761PABPC49983.898Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024864-10083.898ENSRROG00000033355PABPC49983.898Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024864-10083.559ENSSBOG00000026193PABPC49983.559Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024864-9876.471ENSSHAG00000018139PABPC49976.265Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024864-9972.318ENSSFOG00015023514pabpc49972.348Scleropages_formosus
MGP_CAROLIEiJ_G0024864-9972.906ENSSMAG00000009007pabpc49770.224Scophthalmus_maximus
MGP_CAROLIEiJ_G0024864-9973.393ENSSDUG00000012683pabpc49284.225Seriola_dumerili
MGP_CAROLIEiJ_G0024864-9973.393ENSSLDG00000013025pabpc49184.225Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024864-10082.881ENSSARG00000000310PABPC49382.881Sorex_araneus
MGP_CAROLIEiJ_G0024864-9976.450ENSSPUG00000003204PABPC49976.450Sphenodon_punctatus
MGP_CAROLIEiJ_G0024864-9973.214ENSSPAG00000009252pabpc49970.798Stegastes_partitus
MGP_CAROLIEiJ_G0024864-10044.792ENSSSCG00000036170-9644.965Sus_scrofa
MGP_CAROLIEiJ_G0024864-10084.068ENSSSCG00000003660-9984.068Sus_scrofa
MGP_CAROLIEiJ_G0024864-9974.407ENSTGUG00000001266PABPC49974.407Taeniopygia_guttata
MGP_CAROLIEiJ_G0024864-10072.056ENSTRUG00000005907pabpc49871.429Takifugu_rubripes
MGP_CAROLIEiJ_G0024864-10071.429ENSTNIG00000016902pabpc49870.123Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024864-10073.390ENSTBEG00000009035PABPC49973.390Tupaia_belangeri
MGP_CAROLIEiJ_G0024864-10067.113ENSTTRG00000014340PABPC49972.373Tursiops_truncatus
MGP_CAROLIEiJ_G0024864-10083.729ENSUAMG00000000303PABPC49983.729Ursus_americanus
MGP_CAROLIEiJ_G0024864-10083.898ENSUMAG00000019585PABPC49893.860Ursus_maritimus
MGP_CAROLIEiJ_G0024864-10083.729ENSVVUG00000005215PABPC49983.729Vulpes_vulpes
MGP_CAROLIEiJ_G0024864-5295.876ENSXETG00000027221-9895.876Xenopus_tropicalis
MGP_CAROLIEiJ_G0024864-9970.650ENSXETG00000010946pabpc49969.151Xenopus_tropicalis
MGP_CAROLIEiJ_G0024864-10086.550ENSXCOG00000013190pabpc49686.385Xiphophorus_couchianus
MGP_CAROLIEiJ_G0024864-10073.274ENSXMAG00000019007pabpc49972.727Xiphophorus_maculatus

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