EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0024914 (Gene tree)
Gene ID
110291003
Gene Symbol
Zmat3
Alias
Wig1
Full Name
zinc finger matrin-type 3
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
31268 bases
Position
chr3:27348725-27379992
Accession
110291003
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0057218zf-metPF12874.73.7e-2313
MGP_CAROLIEiJ_P0057218zf-metPF12874.73.7e-2323
MGP_CAROLIEiJ_P0057218zf-metPF12874.73.7e-2333
MGP_CAROLIEiJ_P0057219zf-metPF12874.73.7e-2313
MGP_CAROLIEiJ_P0057219zf-metPF12874.73.7e-2323
MGP_CAROLIEiJ_P0057219zf-metPF12874.73.7e-2333
MGP_CAROLIEiJ_P0057218zf-C2H2_jazPF12171.81.9e-2113
MGP_CAROLIEiJ_P0057218zf-C2H2_jazPF12171.81.9e-2123
MGP_CAROLIEiJ_P0057218zf-C2H2_jazPF12171.81.9e-2133
MGP_CAROLIEiJ_P0057219zf-C2H2_jazPF12171.81.9e-2113
MGP_CAROLIEiJ_P0057219zf-C2H2_jazPF12171.81.9e-2123
MGP_CAROLIEiJ_P0057219zf-C2H2_jazPF12171.81.9e-2133
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0057221-3806--- (aa)--
MGP_CAROLIEiJ_T0057220-440-MGP_CAROLIEiJ_P005722029 (aa)-UPI00053BD848
MGP_CAROLIEiJ_T0057219-7660-MGP_CAROLIEiJ_P0057219290 (aa)XP_021013599UPI000A318313
MGP_CAROLIEiJ_T0057218-7776-MGP_CAROLIEiJ_P0057218290 (aa)XP_021013599UPI000A318313
Gene Model
Click here to download MGP_CAROLIEiJ_G0024914's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024914's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0024914Zmat37150.000MGP_CAROLIEiJ_G0023695Zfp385b5740.741
MGP_CAROLIEiJ_G0024914Zmat37435.172MGP_CAROLIEiJ_G0030909Zmat48435.172
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0024914Zmat39987.197ENSG00000172667ZMAT310087.197Homo_sapiens
MGP_CAROLIEiJ_G0024914Zmat38067.811ENSAPOG00000015037zmat39660.563Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0024914Zmat39988.276ENSAMEG00000010742ZMAT310088.276Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024914Zmat39362.593ENSACIG00000023037zmat38562.593Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024914Zmat37868.996ENSAOCG00000017955zmat37768.996Amphiprion_ocellaris
MGP_CAROLIEiJ_G0024914Zmat38068.240ENSAPEG00000014553zmat38168.240Amphiprion_percula
MGP_CAROLIEiJ_G0024914Zmat39462.044ENSATEG00000022244zmat39762.044Anabas_testudineus
MGP_CAROLIEiJ_G0024914Zmat310076.632ENSAPLG00000013292ZMAT310076.632Anas_platyrhynchos
MGP_CAROLIEiJ_G0024914Zmat39375.646ENSACAG00000005005ZMAT310074.061Anolis_carolinensis
MGP_CAROLIEiJ_G0024914Zmat39482.117ENSANAG00000035673ZMAT39682.847Aotus_nancymaae
MGP_CAROLIEiJ_G0024914Zmat37869.163ENSACLG00000026272zmat37869.163Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024914Zmat38567.578ENSAMXG00000009798zmat37067.578Astyanax_mexicanus
MGP_CAROLIEiJ_G0024914Zmat39985.862ENSBTAG00000012463ZMAT310086.207Bos_taurus
MGP_CAROLIEiJ_G0024914Zmat39983.448ENSCJAG00000013399ZMAT310084.138Callithrix_jacchus
MGP_CAROLIEiJ_G0024914Zmat39986.897ENSCAFG00000011081ZMAT310087.586Canis_familiaris
MGP_CAROLIEiJ_G0024914Zmat39986.897ENSCAFG00020023107ZMAT310087.586Canis_lupus_dingo
MGP_CAROLIEiJ_G0024914Zmat39986.851ENSCHIG00000025074ZMAT310086.851Capra_hircus
MGP_CAROLIEiJ_G0024914Zmat39983.737ENSTSYG00000026546ZMAT310085.813Carlito_syrichta
MGP_CAROLIEiJ_G0024914Zmat39985.813ENSCAPG00000014645ZMAT39985.813Cavia_aperea
MGP_CAROLIEiJ_G0024914Zmat39985.813ENSCPOG00000003865ZMAT310085.813Cavia_porcellus
MGP_CAROLIEiJ_G0024914Zmat39981.379ENSCCAG00000036721ZMAT310083.448Cebus_capucinus
MGP_CAROLIEiJ_G0024914Zmat39974.394ENSCATG00000025137ZMAT310074.394Cercocebus_atys
MGP_CAROLIEiJ_G0024914Zmat39985.813ENSCLAG00000013464ZMAT310085.813Chinchilla_lanigera
MGP_CAROLIEiJ_G0024914Zmat39986.505ENSCSAG00000012935ZMAT310086.505Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024914Zmat39985.813ENSCHOG00000005591ZMAT310085.813Choloepus_hoffmanni
MGP_CAROLIEiJ_G0024914Zmat310073.973ENSCPBG00000026917ZMAT310073.973Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024914Zmat39986.207ENSCANG00000029476ZMAT310086.207Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024914Zmat310093.471ENSCGRG00001012339Zmat310093.471Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024914Zmat310093.471ENSCGRG00000011491Zmat310093.471Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024914Zmat39659.184ENSCSEG00000019463zmat37767.932Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024914Zmat37867.241ENSCVAG00000011847zmat37867.241Cyprinodon_variegatus
MGP_CAROLIEiJ_G0024914Zmat38367.068ENSDARG00000080021zmat39464.312Danio_rerio
MGP_CAROLIEiJ_G0024914Zmat39985.862ENSDNOG00000012284ZMAT310085.862Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024914Zmat39985.813ENSDORG00000011801Zmat310085.813Dipodomys_ordii
MGP_CAROLIEiJ_G0024914Zmat38176.596ENSETEG00000008883ZMAT310076.596Echinops_telfairi
MGP_CAROLIEiJ_G0024914Zmat39987.197ENSEASG00005016887ZMAT310087.197Equus_asinus_asinus
MGP_CAROLIEiJ_G0024914Zmat39986.505ENSECAG00000012784ZMAT310086.505Equus_caballus
MGP_CAROLIEiJ_G0024914Zmat39976.552ENSEEUG00000001126ZMAT310076.552Erinaceus_europaeus
MGP_CAROLIEiJ_G0024914Zmat38667.054ENSELUG00000010132zmat37861.565Esox_lucius
MGP_CAROLIEiJ_G0024914Zmat39988.581ENSFCAG00000014578ZMAT310088.581Felis_catus
MGP_CAROLIEiJ_G0024914Zmat310076.289ENSFALG00000008403ZMAT310076.289Ficedula_albicollis
MGP_CAROLIEiJ_G0024914Zmat39984.483ENSFDAG00000013376ZMAT310084.483Fukomys_damarensis
MGP_CAROLIEiJ_G0024914Zmat39658.423ENSFHEG00000003221zmat38165.812Fundulus_heteroclitus
MGP_CAROLIEiJ_G0024914Zmat38067.949ENSGMOG00000008558zmat39667.949Gadus_morhua
MGP_CAROLIEiJ_G0024914Zmat310076.289ENSGALG00000040948ZMAT310076.289Gallus_gallus
MGP_CAROLIEiJ_G0024914Zmat35264.052ENSGAFG00000010485zmat35264.052Gambusia_affinis
MGP_CAROLIEiJ_G0024914Zmat38066.094ENSGACG00000006175zmat38966.094Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0024914Zmat310074.315ENSGAGG00000009275ZMAT310074.315Gopherus_agassizii
MGP_CAROLIEiJ_G0024914Zmat39987.197ENSGGOG00000009975ZMAT310087.197Gorilla_gorilla
MGP_CAROLIEiJ_G0024914Zmat39958.763ENSHBUG00000004401zmat39958.763Haplochromis_burtoni
MGP_CAROLIEiJ_G0024914Zmat39985.467ENSHGLG00000011523ZMAT310085.467Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024914Zmat39985.467ENSHGLG00100012235ZMAT310085.467Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024914Zmat39759.507ENSHCOG00000010624zmat38359.507Hippocampus_comes
MGP_CAROLIEiJ_G0024914Zmat39363.504ENSIPUG00000003043zmat39963.504Ictalurus_punctatus
MGP_CAROLIEiJ_G0024914Zmat39985.121ENSSTOG00000028436ZMAT310088.581Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024914Zmat39986.505ENSJJAG00000004288Zmat310086.505Jaculus_jaculus
MGP_CAROLIEiJ_G0024914Zmat38066.524ENSKMAG00000008962zmat39761.710Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0024914Zmat39661.786ENSLBEG00000001993zmat39561.786Labrus_bergylta
MGP_CAROLIEiJ_G0024914Zmat39659.603ENSLACG00000015780ZMAT37763.448Latimeria_chalumnae
MGP_CAROLIEiJ_G0024914Zmat38469.960ENSLOCG00000001108zmat38760.938Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024914Zmat39985.862ENSLAFG00000000897ZMAT310085.862Loxodonta_africana
MGP_CAROLIEiJ_G0024914Zmat39986.159ENSMFAG00000021292ZMAT310086.159Macaca_fascicularis
MGP_CAROLIEiJ_G0024914Zmat39985.862ENSMMUG00000003216ZMAT310085.862Macaca_mulatta
MGP_CAROLIEiJ_G0024914Zmat39986.207ENSMNEG00000036725ZMAT310086.207Macaca_nemestrina
MGP_CAROLIEiJ_G0024914Zmat39986.505ENSMLEG00000026279ZMAT310086.505Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024914Zmat39659.386ENSMAMG00000012349zmat37468.398Mastacembelus_armatus
MGP_CAROLIEiJ_G0024914Zmat38863.320ENSMZEG00005015427zmat38763.320Maylandia_zebra
MGP_CAROLIEiJ_G0024914Zmat310076.976ENSMGAG00000009873ZMAT310076.976Meleagris_gallopavo
MGP_CAROLIEiJ_G0024914Zmat310093.793ENSMAUG00000001986Zmat310093.793Mesocricetus_auratus
MGP_CAROLIEiJ_G0024914Zmat39986.505ENSMICG00000049501ZMAT310086.505Microcebus_murinus
MGP_CAROLIEiJ_G0024914Zmat39995.156ENSMOCG00000018844Zmat310095.156Microtus_ochrogaster
MGP_CAROLIEiJ_G0024914Zmat38664.516ENSMMOG00000001603zmat38459.928Mola_mola
MGP_CAROLIEiJ_G0024914Zmat39668.571ENSMODG00000021308ZMAT39471.429Monodelphis_domestica
MGP_CAROLIEiJ_G0024914Zmat39660.714ENSMALG00000019683zmat39560.714Monopterus_albus
MGP_CAROLIEiJ_G0024914Zmat310099.655ENSMUSG00000027663Zmat310099.655Mus_musculus
MGP_CAROLIEiJ_G0024914Zmat310097.938MGP_PahariEiJ_G0026359Zmat310097.938Mus_pahari
MGP_CAROLIEiJ_G0024914Zmat310099.310MGP_SPRETEiJ_G0025848Zmat310099.310Mus_spretus
MGP_CAROLIEiJ_G0024914Zmat39987.889ENSMPUG00000017206ZMAT310087.889Mustela_putorius_furo
MGP_CAROLIEiJ_G0024914Zmat39984.932ENSMLUG00000013074ZMAT310084.932Myotis_lucifugus
MGP_CAROLIEiJ_G0024914Zmat310089.310ENSNGAG00000023602Zmat310089.310Nannospalax_galili
MGP_CAROLIEiJ_G0024914Zmat39958.763ENSNBRG00000020886zmat39958.763Neolamprologus_brichardi
MGP_CAROLIEiJ_G0024914Zmat39986.552ENSNLEG00000005658ZMAT310086.552Nomascus_leucogenys
MGP_CAROLIEiJ_G0024914Zmat39970.205ENSMEUG00000015724ZMAT310071.918Notamacropus_eugenii
MGP_CAROLIEiJ_G0024914Zmat39982.699ENSODEG00000003313ZMAT310085.121Octodon_degus
MGP_CAROLIEiJ_G0024914Zmat310058.389ENSONIG00000008388zmat310058.389Oreochromis_niloticus
MGP_CAROLIEiJ_G0024914Zmat37669.683ENSOANG00000009901ZMAT38469.683Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024914Zmat39986.851ENSOCUG00000004658ZMAT310086.851Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024914Zmat39263.004ENSOMEG00000011303zmat38663.004Oryzias_melastigma
MGP_CAROLIEiJ_G0024914Zmat39986.207ENSOGAG00000003252ZMAT310086.207Otolemur_garnettii
MGP_CAROLIEiJ_G0024914Zmat39986.552ENSOARG00000020713ZMAT310086.552Ovis_aries
MGP_CAROLIEiJ_G0024914Zmat39987.197ENSPPAG00000035483ZMAT310087.197Pan_paniscus
MGP_CAROLIEiJ_G0024914Zmat39988.621ENSPPRG00000004407ZMAT310088.621Panthera_pardus
MGP_CAROLIEiJ_G0024914Zmat39988.621ENSPTIG00000009929ZMAT310088.621Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024914Zmat39986.897ENSPTRG00000015641ZMAT310086.897Pan_troglodytes
MGP_CAROLIEiJ_G0024914Zmat39986.207ENSPANG00000023167ZMAT310086.207Papio_anubis
MGP_CAROLIEiJ_G0024914Zmat38371.721ENSPKIG00000023370zmat37566.304Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0024914Zmat310075.768ENSPSIG00000014839ZMAT310075.768Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024914Zmat39459.273ENSPMGG00000023924zmat39759.273Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024914Zmat310092.414ENSPEMG00000019154Zmat310092.414Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024914Zmat37864.315ENSPFOG00000019206zmat37855.375Poecilia_formosa
MGP_CAROLIEiJ_G0024914Zmat39660.357ENSPLAG00000022572zmat39560.357Poecilia_latipinna
MGP_CAROLIEiJ_G0024914Zmat37864.474ENSPMEG00000004131-9557.194Poecilia_mexicana
MGP_CAROLIEiJ_G0024914Zmat37867.391ENSPREG00000022632zmat38167.391Poecilia_reticulata
MGP_CAROLIEiJ_G0024914Zmat39986.552ENSPPYG00000014315ZMAT310086.552Pongo_abelii
MGP_CAROLIEiJ_G0024914Zmat39982.818ENSPCAG00000008585ZMAT310082.818Procavia_capensis
MGP_CAROLIEiJ_G0024914Zmat39986.159ENSPCOG00000022835ZMAT310086.159Propithecus_coquereli
MGP_CAROLIEiJ_G0024914Zmat39987.241ENSPVAG00000004489ZMAT310087.241Pteropus_vampyrus
MGP_CAROLIEiJ_G0024914Zmat39958.763ENSPNYG00000014350zmat39958.763Pundamilia_nyererei
MGP_CAROLIEiJ_G0024914Zmat38666.279ENSPNAG00000015664zmat37066.279Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024914Zmat310097.931ENSRNOG00000010119Zmat310097.931Rattus_norvegicus
MGP_CAROLIEiJ_G0024914Zmat39986.159ENSRBIG00000029622ZMAT310086.159Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024914Zmat39985.862ENSRROG00000038345ZMAT310085.862Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024914Zmat39982.069ENSSBOG00000033332ZMAT310083.045Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024914Zmat39968.151ENSSHAG00000016154ZMAT310070.890Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024914Zmat38373.859ENSSFOG00015006984zmat39368.705Scleropages_formosus
MGP_CAROLIEiJ_G0024914Zmat37867.083ENSSMAG00000019540-5267.083Scophthalmus_maximus
MGP_CAROLIEiJ_G0024914Zmat38665.354ENSSDUG00000016188zmat37465.354Seriola_dumerili
MGP_CAROLIEiJ_G0024914Zmat38665.354ENSSLDG00000018611zmat37465.354Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0024914Zmat37683.182ENSSARG00000004901ZMAT310083.182Sorex_araneus
MGP_CAROLIEiJ_G0024914Zmat310076.897ENSSPUG00000014753ZMAT310077.586Sphenodon_punctatus
MGP_CAROLIEiJ_G0024914Zmat37868.996ENSSPAG00000011062zmat36968.996Stegastes_partitus
MGP_CAROLIEiJ_G0024914Zmat39986.851ENSSSCG00000033860ZMAT310086.851Sus_scrofa
MGP_CAROLIEiJ_G0024914Zmat310076.289ENSTGUG00000010765-10076.289Taeniopygia_guttata
MGP_CAROLIEiJ_G0024914Zmat38167.234ENSTRUG00000004788zmat39762.143Takifugu_rubripes
MGP_CAROLIEiJ_G0024914Zmat38662.550ENSTNIG00000006781zmat38762.550Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0024914Zmat37689.937ENSTBEG00000012359ZMAT310089.937Tupaia_belangeri
MGP_CAROLIEiJ_G0024914Zmat39983.793ENSTTRG00000004923ZMAT310083.793Tursiops_truncatus
MGP_CAROLIEiJ_G0024914Zmat39987.586ENSUAMG00000007623ZMAT310087.586Ursus_americanus
MGP_CAROLIEiJ_G0024914Zmat39988.235ENSUMAG00000007847ZMAT310088.235Ursus_maritimus
MGP_CAROLIEiJ_G0024914Zmat39987.241ENSVPAG00000006611ZMAT310087.241Vicugna_pacos
MGP_CAROLIEiJ_G0024914Zmat39987.241ENSVVUG00000004729ZMAT310087.931Vulpes_vulpes
MGP_CAROLIEiJ_G0024914Zmat38571.660ENSXETG00000007251zmat38471.660Xenopus_tropicalis
MGP_CAROLIEiJ_G0024914Zmat39360.219ENSXCOG00000008397zmat39760.219Xiphophorus_couchianus

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