EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0024932 (Gene tree)
Gene ID: 110291398
Gene Symbol: Mccc1
Alias: 1810045E08Rik|2310058B18Rik|MCCA|MCCalpha
Full Name: methylcrotonoyl-CoA carboxylase 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 42391 bases
Position: chr3:30814285-30856675
Accession: 110291398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0057336	RimK	PF08443.11	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0057341	-	802	-	MGP_CAROLIEiJ_P0057341	201 (aa)	-	-
MGP_CAROLIEiJ_T0057340	-	707	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0057342	-	757	-	MGP_CAROLIEiJ_P0057342	84 (aa)	-	-
MGP_CAROLIEiJ_T0057338	-	6604	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0057339	-	2085	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0057335	-	2931	XM_021158530	MGP_CAROLIEiJ_P0057335	255 (aa)	XP_021014189	UPI000161171A
MGP_CAROLIEiJ_T0057336	-	2455	-	MGP_CAROLIEiJ_P0057336	717 (aa)	-	UPI000A3166F8
MGP_CAROLIEiJ_T0057337	-	471	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0024932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0024932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0024932	Mccc1	93	40.117	MGP_CAROLIEiJ_G0019618	Pcca	92	40.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.637	ENSG00000078070	MCCC1	98	92.000	Homo_sapiens
MGP_CAROLIEiJ_G0024932	Mccc1	99	82.542	ENSAMEG00000015967	MCCC1	98	83.027	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0024932	Mccc1	76	69.161	ENSACIG00000023146	mccc1	93	81.840	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0024932	Mccc1	96	76.403	ENSAPLG00000008989	MCCC1	97	76.403	Anas_platyrhynchos
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.017	ENSANAG00000028235	MCCC1	98	90.588	Aotus_nancymaae
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.219	ENSACLG00000026110	mccc1	98	73.433	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0024932	Mccc1	92	74.359	ENSAMXG00000001531	mccc1	94	74.551	Astyanax_mexicanus
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.314	ENSBTAG00000006548	MCCC1	98	84.724	Bos_taurus
MGP_CAROLIEiJ_G0024932	Mccc1	99	80.622	ENSCJAG00000005103	MCCC1	98	91.059	Callithrix_jacchus
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.876	ENSCAFG00000011749	MCCC1	98	83.876	Canis_familiaris
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.876	ENSCAFG00020001000	MCCC1	98	83.876	Canis_lupus_dingo
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.939	ENSCHIG00000025794	MCCC1	99	84.023	Capra_hircus
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.777	ENSTSYG00000012606	MCCC1	97	93.365	Carlito_syrichta
MGP_CAROLIEiJ_G0024932	Mccc1	94	80.527	ENSCAPG00000012269	MCCC1	98	80.527	Cavia_aperea
MGP_CAROLIEiJ_G0024932	Mccc1	99	80.028	ENSCPOG00000010866	MCCC1	98	80.481	Cavia_porcellus
MGP_CAROLIEiJ_G0024932	Mccc1	99	85.615	ENSCATG00000037699	MCCC1	98	92.706	Cercocebus_atys
MGP_CAROLIEiJ_G0024932	Mccc1	82	81.324	ENSCLAG00000014174	MCCC1	99	81.481	Chinchilla_lanigera
MGP_CAROLIEiJ_G0024932	Mccc1	99	86.173	ENSCSAG00000013226	MCCC1	98	86.704	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0024932	Mccc1	99	75.490	ENSCPBG00000000534	MCCC1	98	76.504	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0024932	Mccc1	93	58.027	ENSCING00000019260	-	92	58.027	Ciona_intestinalis
MGP_CAROLIEiJ_G0024932	Mccc1	93	57.602	ENSCING00000020099	-	99	57.602	Ciona_intestinalis
MGP_CAROLIEiJ_G0024932	Mccc1	93	55.925	ENSCSAVG00000007062	-	99	54.202	Ciona_savignyi
MGP_CAROLIEiJ_G0024932	Mccc1	85	86.928	ENSCANG00000037917	MCCC1	98	93.817	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0024932	Mccc1	97	92.980	ENSCGRG00001012469	Mccc1	98	93.040	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0024932	Mccc1	97	92.264	ENSCGRG00000002616	Mccc1	98	92.330	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0024932	Mccc1	95	72.328	ENSCSEG00000019501	mccc1	95	71.988	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0024932	Mccc1	95	72.874	ENSDARG00000102538	mccc1	96	72.953	Danio_rerio
MGP_CAROLIEiJ_G0024932	Mccc1	100	83.149	ENSDNOG00000012070	MCCC1	98	83.803	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0024932	Mccc1	100	82.802	ENSDORG00000000473	Mccc1	98	85.251	Dipodomys_ordii
MGP_CAROLIEiJ_G0024932	Mccc1	99	76.816	ENSETEG00000008384	MCCC1	98	76.977	Echinops_telfairi
MGP_CAROLIEiJ_G0024932	Mccc1	53	78.068	ENSEBUG00000016250	-	90	78.068	Eptatretus_burgeri
MGP_CAROLIEiJ_G0024932	Mccc1	100	82.410	ENSEASG00005015339	MCCC1	99	93.734	Equus_asinus_asinus
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.520	ENSECAG00000008214	MCCC1	97	84.136	Equus_caballus
MGP_CAROLIEiJ_G0024932	Mccc1	87	73.430	ENSEEUG00000011233	MCCC1	91	73.333	Erinaceus_europaeus
MGP_CAROLIEiJ_G0024932	Mccc1	94	71.852	ENSELUG00000010299	mccc1	99	73.323	Esox_lucius
MGP_CAROLIEiJ_G0024932	Mccc1	85	85.294	ENSFCAG00000000940	MCCC1	97	93.602	Felis_catus
MGP_CAROLIEiJ_G0024932	Mccc1	96	77.746	ENSFALG00000008252	MCCC1	97	77.746	Ficedula_albicollis
MGP_CAROLIEiJ_G0024932	Mccc1	99	76.945	ENSFDAG00000009183	MCCC1	97	77.525	Fukomys_damarensis
MGP_CAROLIEiJ_G0024932	Mccc1	95	69.737	ENSGMOG00000008521	mccc1	98	69.737	Gadus_morhua
MGP_CAROLIEiJ_G0024932	Mccc1	99	75.559	ENSGALG00000008785	MCCC1	92	77.122	Gallus_gallus
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.742	ENSGAFG00000010643	mccc1	98	70.930	Gambusia_affinis
MGP_CAROLIEiJ_G0024932	Mccc1	91	78.560	ENSGAGG00000000770	MCCC1	99	78.560	Gopherus_agassizii
MGP_CAROLIEiJ_G0024932	Mccc1	99	85.335	ENSGGOG00000002784	MCCC1	98	92.941	Gorilla_gorilla
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.219	ENSHBUG00000000956	mccc1	96	71.221	Haplochromis_burtoni
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.101	ENSHGLG00000014650	MCCC1	98	83.593	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.101	ENSHGLG00100015295	MCCC1	98	83.593	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0024932	Mccc1	93	72.372	ENSHCOG00000010503	mccc1	98	72.429	Hippocampus_comes
MGP_CAROLIEiJ_G0024932	Mccc1	99	71.751	ENSIPUG00000024615	mccc1	99	72.017	Ictalurus_punctatus
MGP_CAROLIEiJ_G0024932	Mccc1	99	86.280	ENSSTOG00000010361	MCCC1	98	86.280	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0024932	Mccc1	98	82.386	ENSJJAG00000003543	Mccc1	98	82.386	Jaculus_jaculus
MGP_CAROLIEiJ_G0024932	Mccc1	92	73.152	ENSLBEG00000001741	mccc1	91	73.174	Labrus_bergylta
MGP_CAROLIEiJ_G0024932	Mccc1	96	76.128	ENSLACG00000018119	MCCC1	96	76.128	Latimeria_chalumnae
MGP_CAROLIEiJ_G0024932	Mccc1	96	67.001	ENSLOCG00000000778	mccc1	96	67.001	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0024932	Mccc1	99	81.425	ENSLAFG00000018018	MCCC1	99	81.754	Loxodonta_africana
MGP_CAROLIEiJ_G0024932	Mccc1	99	86.034	ENSMFAG00000000043	MCCC1	98	93.176	Macaca_fascicularis
MGP_CAROLIEiJ_G0024932	Mccc1	85	87.582	ENSMMUG00000010553	MCCC1	98	93.176	Macaca_mulatta
MGP_CAROLIEiJ_G0024932	Mccc1	99	82.123	ENSMNEG00000017163	MCCC1	99	87.418	Macaca_nemestrina
MGP_CAROLIEiJ_G0024932	Mccc1	99	82.542	ENSMLEG00000039351	MCCC1	98	92.706	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.219	ENSMZEG00005015532	mccc1	96	71.221	Maylandia_zebra
MGP_CAROLIEiJ_G0024932	Mccc1	96	77.746	ENSMGAG00000009494	MCCC1	99	77.746	Meleagris_gallopavo
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.218	ENSMICG00000048884	MCCC1	98	90.610	Microcebus_murinus
MGP_CAROLIEiJ_G0024932	Mccc1	98	89.943	ENSMOCG00000003671	Mccc1	99	89.958	Microtus_ochrogaster
MGP_CAROLIEiJ_G0024932	Mccc1	99	79.804	ENSMODG00000021288	MCCC1	95	80.925	Monodelphis_domestica
MGP_CAROLIEiJ_G0024932	Mccc1	100	99.303	ENSMUSG00000027709	Mccc1	100	99.303	Mus_musculus
MGP_CAROLIEiJ_G0024932	Mccc1	100	99.303	MGP_SPRETEiJ_G0025866	Mccc1	100	99.303	Mus_spretus
MGP_CAROLIEiJ_G0024932	Mccc1	97	83.815	ENSMPUG00000002371	MCCC1	87	83.815	Mustela_putorius_furo
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.217	ENSMLUG00000012257	MCCC1	97	84.165	Myotis_lucifugus
MGP_CAROLIEiJ_G0024932	Mccc1	97	88.092	ENSNGAG00000001216	Mccc1	99	87.571	Nannospalax_galili
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.124	ENSNLEG00000005989	MCCC1	98	92.706	Nomascus_leucogenys
MGP_CAROLIEiJ_G0024932	Mccc1	99	78.107	ENSOPRG00000007258	MCCC1	98	78.107	Ochotona_princeps
MGP_CAROLIEiJ_G0024932	Mccc1	99	81.145	ENSODEG00000012286	MCCC1	98	81.612	Octodon_degus
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.366	ENSONIG00000008395	mccc1	96	71.366	Oreochromis_niloticus
MGP_CAROLIEiJ_G0024932	Mccc1	92	80.822	ENSOANG00000011253	MCCC1	99	80.822	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0024932	Mccc1	99	78.631	ENSOCUG00000012393	MCCC1	98	79.066	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0024932	Mccc1	96	71.014	ENSORLG00000011678	mccc1	99	71.159	Oryzias_latipes
MGP_CAROLIEiJ_G0024932	Mccc1	96	71.014	ENSORLG00020005680	mccc1	98	71.159	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0024932	Mccc1	93	73.042	ENSORLG00015003526	mccc1	96	72.660	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0024932	Mccc1	96	70.785	ENSOMEG00000011470	mccc1	97	70.851	Oryzias_melastigma
MGP_CAROLIEiJ_G0024932	Mccc1	91	83.767	ENSOGAG00000000659	MCCC1	99	83.767	Otolemur_garnettii
MGP_CAROLIEiJ_G0024932	Mccc1	97	85.405	ENSOARG00000020660	MCCC1	99	85.405	Ovis_aries
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.637	ENSPPAG00000036167	MCCC1	98	92.000	Pan_paniscus
MGP_CAROLIEiJ_G0024932	Mccc1	85	84.804	ENSPPRG00000000127	MCCC1	97	93.128	Panthera_pardus
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.380	ENSPTIG00000018514	MCCC1	97	92.417	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0024932	Mccc1	99	84.637	ENSPTRG00000015662	MCCC1	98	92.235	Pan_troglodytes
MGP_CAROLIEiJ_G0024932	Mccc1	99	86.173	ENSPANG00000006870	MCCC1	98	93.176	Papio_anubis
MGP_CAROLIEiJ_G0024932	Mccc1	96	76.488	ENSPSIG00000017510	MCCC1	99	77.489	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0024932	Mccc1	92	68.381	ENSPMGG00000000155	mccc1	96	68.060	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0024932	Mccc1	99	92.857	ENSPEMG00000014164	Mccc1	99	93.050	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0024932	Mccc1	99	79.132	ENSPCIG00000013027	MCCC1	83	79.349	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0024932	Mccc1	95	72.165	ENSPFOG00000019171	mccc1	96	71.948	Poecilia_formosa
MGP_CAROLIEiJ_G0024932	Mccc1	95	72.018	ENSPLAG00000022735	mccc1	96	71.802	Poecilia_latipinna
MGP_CAROLIEiJ_G0024932	Mccc1	95	72.018	ENSPMEG00000000664	mccc1	96	71.802	Poecilia_mexicana
MGP_CAROLIEiJ_G0024932	Mccc1	99	85.615	ENSPPYG00000014331	MCCC1	98	86.139	Pongo_abelii
MGP_CAROLIEiJ_G0024932	Mccc1	99	72.984	ENSPCAG00000003195	MCCC1	97	73.153	Procavia_capensis
MGP_CAROLIEiJ_G0024932	Mccc1	100	84.743	ENSPCOG00000020095	MCCC1	98	90.845	Propithecus_coquereli
MGP_CAROLIEiJ_G0024932	Mccc1	98	80.141	ENSPVAG00000013436	MCCC1	98	80.747	Pteropus_vampyrus
MGP_CAROLIEiJ_G0024932	Mccc1	95	67.105	ENSPNAG00000025069	mccc1	97	66.908	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0024932	Mccc1	99	95.512	ENSRNOG00000013293	Mccc1	99	95.512	Rattus_norvegicus
MGP_CAROLIEiJ_G0024932	Mccc1	99	85.615	ENSRBIG00000038726	MCCC1	98	92.941	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0024932	Mccc1	99	85.335	ENSRROG00000041247	MCCC1	98	92.706	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0024932	Mccc1	92	86.149	ENSSBOG00000026219	MCCC1	98	92.548	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0024932	Mccc1	96	80.058	ENSSHAG00000016104	MCCC1	99	80.058	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0024932	Mccc1	98	72.119	ENSSFOG00015007784	mccc1	97	73.517	Scleropages_formosus
MGP_CAROLIEiJ_G0024932	Mccc1	98	70.538	ENSSMAG00000019667	mccc1	93	73.692	Scophthalmus_maximus
MGP_CAROLIEiJ_G0024932	Mccc1	92	77.626	ENSSPUG00000014366	MCCC1	99	77.626	Sphenodon_punctatus
MGP_CAROLIEiJ_G0024932	Mccc1	95	71.281	ENSSPAG00000011206	mccc1	98	70.559	Stegastes_partitus
MGP_CAROLIEiJ_G0024932	Mccc1	100	80.614	ENSSSCG00000025942	MCCC1	99	84.642	Sus_scrofa
MGP_CAROLIEiJ_G0024932	Mccc1	94	78.519	ENSTGUG00000010506	MCCC1	99	78.519	Taeniopygia_guttata
MGP_CAROLIEiJ_G0024932	Mccc1	94	78.338	ENSTBEG00000007988	MCCC1	99	78.689	Tupaia_belangeri
MGP_CAROLIEiJ_G0024932	Mccc1	100	84.605	ENSTTRG00000016518	MCCC1	98	85.431	Tursiops_truncatus
MGP_CAROLIEiJ_G0024932	Mccc1	64	88.865	ENSUAMG00000008378	MCCC1	98	92.271	Ursus_americanus
MGP_CAROLIEiJ_G0024932	Mccc1	99	82.542	ENSUMAG00000006927	MCCC1	98	83.027	Ursus_maritimus
MGP_CAROLIEiJ_G0024932	Mccc1	99	83.027	ENSVVUG00000006835	MCCC1	98	83.027	Vulpes_vulpes
MGP_CAROLIEiJ_G0024932	Mccc1	97	75.287	ENSXETG00000016826	mccc1	97	75.287	Xenopus_tropicalis