EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025120 (Gene tree)
Gene ID: 110290834
Gene Symbol: Gatb
Alias: 9430026F02Rik|Pet112|Pet112l
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 76110 bases
Position: chr3:78345739-78421848
Accession: 110290834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0058202	GatB_Yqey	PF02637.18	7.8e-44	1	1
MGP_CAROLIEiJ_P0058204	GatB_Yqey	PF02637.18	2.6e-33	1	1
MGP_CAROLIEiJ_P0058203	GatB_Yqey	PF02637.18	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0058205	-	366	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0058204	-	1977	-	MGP_CAROLIEiJ_P0058204	553 (aa)	-	-
MGP_CAROLIEiJ_T0058206	-	1855	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0058203	-	1824	XM_021157656	MGP_CAROLIEiJ_P0058203	472 (aa)	XP_021013315	UPI000A31AA1D
MGP_CAROLIEiJ_T0058202	-	3510	-	MGP_CAROLIEiJ_P0058202	557 (aa)	XP_021013314	UPI000A318E61

Gene Model

Click here to download MGP_CAROLIEiJ_G0025120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSG00000059691	GATB	100	84.381	Homo_sapiens
MGP_CAROLIEiJ_G0025120	Gatb	93	67.800	ENSAPOG00000022676	gatb	96	64.259	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.966	ENSAMEG00000018434	GATB	99	82.111	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025120	Gatb	74	69.886	ENSACIG00000015827	gatb	100	64.531	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025120	Gatb	87	71.117	ENSAOCG00000009635	gatb	95	66.801	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025120	Gatb	87	68.204	ENSAPEG00000023666	gatb	93	64.315	Amphiprion_percula
MGP_CAROLIEiJ_G0025120	Gatb	93	67.580	ENSATEG00000011821	gatb	96	63.576	Anabas_testudineus
MGP_CAROLIEiJ_G0025120	Gatb	87	77.262	ENSAPLG00000003933	GATB	99	74.089	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025120	Gatb	87	76.585	ENSACAG00000002772	GATB	90	72.672	Anolis_carolinensis
MGP_CAROLIEiJ_G0025120	Gatb	99	85.775	ENSANAG00000020953	GATB	100	83.842	Aotus_nancymaae
MGP_CAROLIEiJ_G0025120	Gatb	77	71.074	ENSACLG00000026091	gatb	92	65.208	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025120	Gatb	83	67.259	ENSAMXG00000021662	gatb	89	61.122	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025120	Gatb	99	84.289	ENSBTAG00000013914	GATB	99	82.194	Bos_taurus
MGP_CAROLIEiJ_G0025120	Gatb	100	85.381	ENSCJAG00000002147	GATB	99	83.633	Callithrix_jacchus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.015	ENSCAFG00000008088	GATB	99	80.576	Canis_familiaris
MGP_CAROLIEiJ_G0025120	Gatb	99	83.015	ENSCAFG00020026686	GATB	98	83.015	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025120	Gatb	99	84.501	ENSCHIG00000020111	GATB	99	82.374	Capra_hircus
MGP_CAROLIEiJ_G0025120	Gatb	99	87.686	ENSTSYG00000009976	GATB	99	85.432	Carlito_syrichta
MGP_CAROLIEiJ_G0025120	Gatb	99	70.344	ENSCAPG00000010977	GATB	99	70.344	Cavia_aperea
MGP_CAROLIEiJ_G0025120	Gatb	99	81.316	ENSCPOG00000005023	GATB	99	81.193	Cavia_porcellus
MGP_CAROLIEiJ_G0025120	Gatb	99	84.501	ENSCCAG00000021445	GATB	95	84.501	Cebus_capucinus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.775	ENSCATG00000034281	GATB	99	83.993	Cercocebus_atys
MGP_CAROLIEiJ_G0025120	Gatb	100	84.322	ENSCLAG00000005772	GATB	100	84.322	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSCSAG00000003318	GATB	99	83.453	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025120	Gatb	99	82.166	ENSCHOG00000008476	GATB	99	80.216	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025120	Gatb	88	76.386	ENSCPBG00000025824	GATB	91	73.547	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025120	Gatb	99	85.563	ENSCANG00000029227	GATB	99	83.273	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025120	Gatb	100	90.890	ENSCGRG00001024051	GATB	100	90.890	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025120	Gatb	100	90.890	ENSCGRG00000012974	GATB	100	90.890	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025120	Gatb	92	68.119	ENSCSEG00000004009	gatb	100	62.700	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025120	Gatb	87	69.903	ENSCVAG00000017180	gatb	99	65.996	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025120	Gatb	98	65.517	ENSDARG00000037309	gatb	99	61.314	Danio_rerio
MGP_CAROLIEiJ_G0025120	Gatb	99	82.875	ENSDNOG00000012683	GATB	100	81.541	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.805	ENSDORG00000010241	Gatb	99	84.838	Dipodomys_ordii
MGP_CAROLIEiJ_G0025120	Gatb	88	51.807	FBgn0039153	GatB	97	46.589	Drosophila_melanogaster
MGP_CAROLIEiJ_G0025120	Gatb	99	61.871	ENSETEG00000002356	GATB	99	61.871	Echinops_telfairi
MGP_CAROLIEiJ_G0025120	Gatb	99	85.138	ENSEASG00005015868	GATB	99	84.173	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.227	ENSECAG00000003539	GATB	99	82.554	Equus_caballus
MGP_CAROLIEiJ_G0025120	Gatb	85	72.093	ENSEEUG00000002311	GATB	85	72.093	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025120	Gatb	90	67.529	ENSELUG00000013584	gatb	98	63.725	Esox_lucius
MGP_CAROLIEiJ_G0025120	Gatb	99	84.289	ENSFCAG00000003207	GATB	99	81.835	Felis_catus
MGP_CAROLIEiJ_G0025120	Gatb	77	74.931	ENSFALG00000002209	GATB	99	71.365	Ficedula_albicollis
MGP_CAROLIEiJ_G0025120	Gatb	100	83.263	ENSFDAG00000006426	GATB	100	83.263	Fukomys_damarensis
MGP_CAROLIEiJ_G0025120	Gatb	90	68.618	ENSFHEG00000008643	GATB	93	64.453	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025120	Gatb	86	70.343	ENSGMOG00000001575	gatb	100	65.244	Gadus_morhua
MGP_CAROLIEiJ_G0025120	Gatb	89	73.077	ENSGALG00000010097	GATB	91	73.077	Gallus_gallus
MGP_CAROLIEiJ_G0025120	Gatb	93	66.136	ENSGAFG00000014422	gatb	96	62.476	Gambusia_affinis
MGP_CAROLIEiJ_G0025120	Gatb	86	69.533	ENSGACG00000017143	gatb	99	65.102	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025120	Gatb	95	72.185	ENSGAGG00000007826	GATB	97	70.391	Gopherus_agassizii
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSGGOG00000011099	GATB	100	84.201	Gorilla_gorilla
MGP_CAROLIEiJ_G0025120	Gatb	93	68.707	ENSHBUG00000009656	gatb	94	65.511	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025120	Gatb	99	83.864	ENSHGLG00000001316	GATB	100	83.686	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025120	Gatb	100	83.475	ENSHGLG00100004289	GATB	100	83.475	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025120	Gatb	87	69.100	ENSHCOG00000006270	gatb	90	64.588	Hippocampus_comes
MGP_CAROLIEiJ_G0025120	Gatb	92	66.972	ENSIPUG00000013560	gatb	94	63.148	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025120	Gatb	99	84.926	ENSSTOG00000005689	GATB	100	83.842	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.775	ENSJJAG00000016979	Gatb	99	85.745	Jaculus_jaculus
MGP_CAROLIEiJ_G0025120	Gatb	88	71.053	ENSKMAG00000004727	gatb	92	66.600	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025120	Gatb	89	69.504	ENSLBEG00000019511	gatb	93	65.157	Labrus_bergylta
MGP_CAROLIEiJ_G0025120	Gatb	89	63.783	ENSLACG00000004352	GATB	97	63.454	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025120	Gatb	87	63.680	ENSLOCG00000008564	gatb	89	60.241	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.227	ENSLAFG00000022607	GATB	99	82.554	Loxodonta_africana
MGP_CAROLIEiJ_G0025120	Gatb	99	86.200	ENSMMUG00000011048	GATB	99	84.173	Macaca_mulatta
MGP_CAROLIEiJ_G0025120	Gatb	99	86.412	ENSMNEG00000040147	GATB	99	84.353	Macaca_nemestrina
MGP_CAROLIEiJ_G0025120	Gatb	99	85.563	ENSMLEG00000042135	GATB	99	83.273	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025120	Gatb	93	68.027	ENSMAMG00000013256	gatb	96	63.878	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025120	Gatb	93	68.934	ENSMZEG00005008495	gatb	96	65.209	Maylandia_zebra
MGP_CAROLIEiJ_G0025120	Gatb	87	76.284	ENSMGAG00000004276	GATB	98	74.089	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025120	Gatb	100	90.466	ENSMAUG00000019099	Gatb	100	90.466	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025120	Gatb	99	86.837	ENSMICG00000004311	GATB	99	85.791	Microcebus_murinus
MGP_CAROLIEiJ_G0025120	Gatb	100	91.737	ENSMOCG00000017566	Gatb	100	91.737	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025120	Gatb	87	58.738	ENSMMOG00000005376	gatb	87	56.137	Mola_mola
MGP_CAROLIEiJ_G0025120	Gatb	99	76.371	ENSMODG00000001031	GATB	99	74.014	Monodelphis_domestica
MGP_CAROLIEiJ_G0025120	Gatb	90	69.014	ENSMALG00000003418	gatb	91	67.094	Monopterus_albus
MGP_CAROLIEiJ_G0025120	Gatb	100	98.553	ENSMUSG00000028085	Gatb	100	98.553	Mus_musculus
MGP_CAROLIEiJ_G0025120	Gatb	100	96.186	MGP_PahariEiJ_G0026563	Gatb	100	96.186	Mus_pahari
MGP_CAROLIEiJ_G0025120	Gatb	100	98.025	MGP_SPRETEiJ_G0026062	Gatb	100	98.025	Mus_spretus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.864	ENSMPUG00000007394	GATB	99	82.914	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025120	Gatb	99	85.138	ENSMLUG00000008194	GATB	99	83.453	Myotis_lucifugus
MGP_CAROLIEiJ_G0025120	Gatb	100	86.653	ENSNGAG00000002152	Gatb	100	86.653	Nannospalax_galili
MGP_CAROLIEiJ_G0025120	Gatb	74	70.170	ENSNBRG00000005947	gatb	100	65.148	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025120	Gatb	99	86.412	ENSNLEG00000005836	GATB	100	84.201	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025120	Gatb	87	80.779	ENSMEUG00000001479	GATB	99	77.374	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025120	Gatb	99	83.015	ENSOPRG00000011496	GATB	99	81.867	Ochotona_princeps
MGP_CAROLIEiJ_G0025120	Gatb	100	84.958	ENSODEG00000005429	GATB	100	84.958	Octodon_degus
MGP_CAROLIEiJ_G0025120	Gatb	93	68.707	ENSONIG00000010059	gatb	96	64.829	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025120	Gatb	74	80.912	ENSOANG00000005282	GATB	99	75.632	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.652	ENSOCUG00000016875	GATB	99	81.835	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025120	Gatb	87	66.990	ENSORLG00000007740	gatb	99	64.300	Oryzias_latipes
MGP_CAROLIEiJ_G0025120	Gatb	93	66.366	ENSORLG00020016385	gatb	95	63.810	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025120	Gatb	93	65.986	ENSOMEG00000003089	gatb	95	63.532	Oryzias_melastigma
MGP_CAROLIEiJ_G0025120	Gatb	99	83.864	ENSOGAG00000014181	GATB	99	83.094	Otolemur_garnettii
MGP_CAROLIEiJ_G0025120	Gatb	99	84.076	ENSOARG00000004355	GATB	99	81.216	Ovis_aries
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSPPAG00000041690	GATB	100	84.381	Pan_paniscus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.864	ENSPPRG00000004993	GATB	99	81.475	Panthera_pardus
MGP_CAROLIEiJ_G0025120	Gatb	99	84.289	ENSPTIG00000021433	GATB	99	82.014	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025120	Gatb	100	80.251	ENSPTRG00000016513	GATB	100	80.251	Pan_troglodytes
MGP_CAROLIEiJ_G0025120	Gatb	99	82.166	ENSPANG00000024036	GATB	99	80.755	Papio_anubis
MGP_CAROLIEiJ_G0025120	Gatb	89	68.974	ENSPKIG00000017076	gatb	96	65.524	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025120	Gatb	95	70.989	ENSPSIG00000017832	GATB	98	68.646	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025120	Gatb	87	59.466	ENSPMGG00000016497	gatb	89	56.539	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025120	Gatb	100	91.741	ENSPEMG00000011096	Gatb	100	91.741	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025120	Gatb	99	77.070	ENSPCIG00000015213	GATB	99	74.234	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025120	Gatb	87	70.120	ENSPFOG00000009933	gatb	91	65.800	Poecilia_formosa
MGP_CAROLIEiJ_G0025120	Gatb	87	70.874	ENSPLAG00000015569	gatb	94	64.588	Poecilia_latipinna
MGP_CAROLIEiJ_G0025120	Gatb	87	69.903	ENSPMEG00000006100	gatb	94	63.783	Poecilia_mexicana
MGP_CAROLIEiJ_G0025120	Gatb	87	69.417	ENSPREG00000000128	gatb	94	63.253	Poecilia_reticulata
MGP_CAROLIEiJ_G0025120	Gatb	99	86.200	ENSPPYG00000015121	GATB	100	84.022	Pongo_abelii
MGP_CAROLIEiJ_G0025120	Gatb	100	63.555	ENSPCAG00000005950	GATB	100	63.555	Procavia_capensis
MGP_CAROLIEiJ_G0025120	Gatb	97	88.158	ENSPCOG00000021777	GATB	98	86.691	Propithecus_coquereli
MGP_CAROLIEiJ_G0025120	Gatb	99	84.076	ENSPVAG00000006891	GATB	99	82.374	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025120	Gatb	93	68.934	ENSPNYG00000013884	gatb	96	65.209	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025120	Gatb	86	68.382	ENSPNAG00000020150	gatb	89	63.692	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025120	Gatb	100	92.998	ENSRNOG00000037655	Gatb	100	92.998	Rattus_norvegicus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSRBIG00000006453	GATB	99	83.813	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025120	Gatb	99	85.987	ENSRROG00000041575	GATB	99	83.813	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025120	Gatb	92	31.808	YBL080C	-	91	30.695	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0025120	Gatb	99	85.563	ENSSBOG00000022495	GATB	99	83.453	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025120	Gatb	99	76.433	ENSSHAG00000011763	GATB	99	74.054	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025120	Gatb	91	69.838	ENSSFOG00015015565	gatb	93	66.408	Scleropages_formosus
MGP_CAROLIEiJ_G0025120	Gatb	99	63.711	ENSSMAG00000003609	gatb	79	60.702	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025120	Gatb	89	69.928	ENSSDUG00000019847	gatb	91	65.538	Seriola_dumerili
MGP_CAROLIEiJ_G0025120	Gatb	87	70.874	ENSSLDG00000010253	gatb	95	66.465	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025120	Gatb	76	69.254	ENSSARG00000003212	GATB	76	69.254	Sorex_araneus
MGP_CAROLIEiJ_G0025120	Gatb	87	76.528	ENSSPUG00000014453	GATB	96	73.631	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025120	Gatb	87	71.602	ENSSPAG00000014465	gatb	99	66.801	Stegastes_partitus
MGP_CAROLIEiJ_G0025120	Gatb	99	83.439	ENSSSCG00000009015	GATB	99	83.486	Sus_scrofa
MGP_CAROLIEiJ_G0025120	Gatb	87	77.751	ENSTGUG00000004986	GATB	99	74.291	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025120	Gatb	86	63.614	ENSTRUG00000015238	gatb	92	59.684	Takifugu_rubripes
MGP_CAROLIEiJ_G0025120	Gatb	69	66.564	ENSTNIG00000003378	gatb	100	61.314	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025120	Gatb	87	62.712	ENSTBEG00000009804	GATB	88	62.500	Tupaia_belangeri
MGP_CAROLIEiJ_G0025120	Gatb	99	83.652	ENSTTRG00000010679	GATB	99	81.475	Tursiops_truncatus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.350	ENSUAMG00000021441	GATB	99	83.273	Ursus_americanus
MGP_CAROLIEiJ_G0025120	Gatb	99	85.350	ENSUMAG00000016157	GATB	99	82.914	Ursus_maritimus
MGP_CAROLIEiJ_G0025120	Gatb	76	92.308	ENSVPAG00000010844	GATB	80	75.224	Vicugna_pacos
MGP_CAROLIEiJ_G0025120	Gatb	99	83.439	ENSVVUG00000025083	GATB	99	80.935	Vulpes_vulpes
MGP_CAROLIEiJ_G0025120	Gatb	85	74.442	ENSXETG00000034167	GATB	98	70.040	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025120	Gatb	93	66.364	ENSXMAG00000008071	gatb	92	75.460	Xiphophorus_maculatus