EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025152 (Gene tree)
Gene ID: 110291349
Gene Symbol: Gpatch4
Alias: 2610029K21Rik|Gpatc4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 11737 bases
Position: chr3:80819567-80831303
Accession: 110291349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0058344	G-patch	PF01585.23	3.4e-09	1	1
MGP_CAROLIEiJ_P0058341	G-patch	PF01585.23	5.5e-09	1	1
MGP_CAROLIEiJ_P0058342	G-patch	PF01585.23	5.5e-09	1	1
MGP_CAROLIEiJ_P0058345	G-patch	PF01585.23	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0058341	-	1762	-	MGP_CAROLIEiJ_P0058341	415 (aa)	XP_021014116	UPI000A316B75
MGP_CAROLIEiJ_T0058342	-	1624	-	MGP_CAROLIEiJ_P0058342	415 (aa)	XP_021014116	UPI000A316B75
MGP_CAROLIEiJ_T0058343	-	745	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0058344	-	959	-	MGP_CAROLIEiJ_P0058344	239 (aa)	-	-
MGP_CAROLIEiJ_T0058345	-	2200	-	MGP_CAROLIEiJ_P0058345	415 (aa)	XP_021014116	UPI000A316B75

Gene Model

Click here to download MGP_CAROLIEiJ_G0025152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.564	ENSG00000160818	GPATCH4	95	86.726	Homo_sapiens
MGP_CAROLIEiJ_G0025152	Gpatch4	87	43.750	ENSAPOG00000008436	gpatch4	51	47.525	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025152	Gpatch4	51	47.581	ENSACIG00000017309	-	63	59.740	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025152	Gpatch4	87	43.556	ENSAOCG00000015494	gpatch4	54	44.651	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025152	Gpatch4	90	42.672	ENSAPEG00000022243	gpatch4	54	44.651	Amphiprion_percula
MGP_CAROLIEiJ_G0025152	Gpatch4	84	45.872	ENSATEG00000006359	gpatch4	50	46.330	Anabas_testudineus
MGP_CAROLIEiJ_G0025152	Gpatch4	85	80.392	ENSANAG00000035354	GPATCH4	63	73.840	Aotus_nancymaae
MGP_CAROLIEiJ_G0025152	Gpatch4	82	44.811	ENSACLG00000010456	gpatch4	58	52.525	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.051	ENSBTAG00000000406	GPATCH4	87	63.361	Bos_taurus
MGP_CAROLIEiJ_G0025152	Gpatch4	51	82.645	ENSCJAG00000031662	-	84	82.645	Callithrix_jacchus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.234	ENSCJAG00000006048	GPATCH4	92	85.714	Callithrix_jacchus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.051	ENSCHIG00000021295	GPATCH4	87	64.146	Capra_hircus
MGP_CAROLIEiJ_G0025152	Gpatch4	98	77.872	ENSCCAG00000036114	GPATCH4	92	85.714	Cebus_capucinus
MGP_CAROLIEiJ_G0025152	Gpatch4	84	81.000	ENSCATG00000042152	GPATCH4	82	82.906	Cercocebus_atys
MGP_CAROLIEiJ_G0025152	Gpatch4	99	79.079	ENSCLAG00000002967	-	56	75.519	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025152	Gpatch4	84	81.000	ENSCSAG00000002161	GPATCH4	91	59.801	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025152	Gpatch4	77	52.041	ENSCPBG00000025803	GPATCH4	64	52.551	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025152	Gpatch4	69	41.279	ENSCING00000004717	-	71	41.361	Ciona_intestinalis
MGP_CAROLIEiJ_G0025152	Gpatch4	66	43.636	ENSCSAVG00000003297	-	64	43.452	Ciona_savignyi
MGP_CAROLIEiJ_G0025152	Gpatch4	84	80.500	ENSCANG00000030031	GPATCH4	82	83.761	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025152	Gpatch4	99	91.176	ENSCGRG00001016898	Gpatch4	97	79.146	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025152	Gpatch4	99	91.176	ENSCGRG00000008399	Gpatch4	97	79.146	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025152	Gpatch4	74	44.865	ENSCSEG00000012030	gpatch4	55	46.486	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025152	Gpatch4	77	46.269	ENSDARG00000091931	gpatch4	69	47.727	Danio_rerio
MGP_CAROLIEiJ_G0025152	Gpatch4	99	76.271	ENSDNOG00000034673	GPATCH4	70	67.823	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025152	Gpatch4	56	72.180	ENSDORG00000011332	-	87	72.180	Dipodomys_ordii
MGP_CAROLIEiJ_G0025152	Gpatch4	73	38.974	FBgn0039829	CG15561	54	38.974	Drosophila_melanogaster
MGP_CAROLIEiJ_G0025152	Gpatch4	65	43.452	ENSEBUG00000006498	-	55	43.529	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025152	Gpatch4	100	79.079	ENSEASG00005018284	GPATCH4	93	62.222	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025152	Gpatch4	98	79.060	ENSECAG00000011135	GPATCH4	88	71.096	Equus_caballus
MGP_CAROLIEiJ_G0025152	Gpatch4	98	75.214	ENSFCAG00000006554	GPATCH4	54	81.218	Felis_catus
MGP_CAROLIEiJ_G0025152	Gpatch4	91	42.731	ENSFHEG00000003097	gpatch4	56	45.581	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025152	Gpatch4	80	44.878	ENSGALG00000048365	GPATCH4	56	44.878	Gallus_gallus
MGP_CAROLIEiJ_G0025152	Gpatch4	84	43.541	ENSGAFG00000021732	gpatch4	69	43.541	Gambusia_affinis
MGP_CAROLIEiJ_G0025152	Gpatch4	77	47.500	ENSGACG00000013318	gpatch4	60	49.000	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025152	Gpatch4	77	52.041	ENSGAGG00000020710	GPATCH4	64	52.551	Gopherus_agassizii
MGP_CAROLIEiJ_G0025152	Gpatch4	80	83.770	ENSGGOG00000000753	GPATCH4	82	83.761	Gorilla_gorilla
MGP_CAROLIEiJ_G0025152	Gpatch4	82	44.811	ENSHBUG00000009675	gpatch4	57	52.525	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025152	Gpatch4	95	42.797	ENSHCOG00000007016	gpatch4	56	45.596	Hippocampus_comes
MGP_CAROLIEiJ_G0025152	Gpatch4	85	46.544	ENSIPUG00000006348	gpatch4	71	45.238	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025152	Gpatch4	99	72.881	ENSSTOG00000020510	GPATCH4	89	82.906	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025152	Gpatch4	84	44.843	ENSKMAG00000015765	gpatch4	59	45.740	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025152	Gpatch4	83	43.836	ENSLBEG00000009364	-	65	46.047	Labrus_bergylta
MGP_CAROLIEiJ_G0025152	Gpatch4	82	49.268	ENSLACG00000009700	GPATCH4	60	49.268	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025152	Gpatch4	86	41.964	ENSLOCG00000008820	gpatch4	61	43.662	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025152	Gpatch4	100	59.414	ENSLAFG00000028327	-	96	48.395	Loxodonta_africana
MGP_CAROLIEiJ_G0025152	Gpatch4	80	82.199	ENSMFAG00000030965	GPATCH4	82	82.906	Macaca_fascicularis
MGP_CAROLIEiJ_G0025152	Gpatch4	84	81.500	ENSMMUG00000002624	GPATCH4	82	83.761	Macaca_mulatta
MGP_CAROLIEiJ_G0025152	Gpatch4	82	81.026	ENSMNEG00000028844	GPATCH4	82	82.906	Macaca_nemestrina
MGP_CAROLIEiJ_G0025152	Gpatch4	82	80.513	ENSMLEG00000037909	GPATCH4	82	82.051	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	43.662	ENSMZEG00005017452	gpatch4	55	46.226	Maylandia_zebra
MGP_CAROLIEiJ_G0025152	Gpatch4	68	73.457	ENSMICG00000034025	-	93	75.676	Microcebus_murinus
MGP_CAROLIEiJ_G0025152	Gpatch4	75	67.039	ENSMICG00000038615	-	95	62.698	Microcebus_murinus
MGP_CAROLIEiJ_G0025152	Gpatch4	97	78.112	ENSMICG00000013624	GPATCH4	92	68.876	Microcebus_murinus
MGP_CAROLIEiJ_G0025152	Gpatch4	91	43.830	ENSMMOG00000017095	gpatch4	96	50.467	Mola_mola
MGP_CAROLIEiJ_G0025152	Gpatch4	81	59.184	ENSMODG00000014154	-	96	59.184	Monodelphis_domestica
MGP_CAROLIEiJ_G0025152	Gpatch4	99	57.676	ENSMODG00000016818	-	67	64.211	Monodelphis_domestica
MGP_CAROLIEiJ_G0025152	Gpatch4	90	43.348	ENSMALG00000003793	gpatch4	50	46.411	Monopterus_albus
MGP_CAROLIEiJ_G0025152	Gpatch4	100	94.940	ENSMUSG00000028069	Gpatch4	100	94.940	Mus_musculus
MGP_CAROLIEiJ_G0025152	Gpatch4	100	98.326	MGP_PahariEiJ_G0026595	-	100	98.326	Mus_pahari
MGP_CAROLIEiJ_G0025152	Gpatch4	99	95.798	MGP_SPRETEiJ_G0026093	Gpatch4	99	95.798	Mus_spretus
MGP_CAROLIEiJ_G0025152	Gpatch4	100	75.732	ENSMLUG00000009571	GPATCH4	80	61.972	Myotis_lucifugus
MGP_CAROLIEiJ_G0025152	Gpatch4	51	77.869	ENSNGAG00000019958	-	92	77.869	Nannospalax_galili
MGP_CAROLIEiJ_G0025152	Gpatch4	93	78.027	ENSNLEG00000027678	GPATCH4	91	62.428	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025152	Gpatch4	78	59.893	ENSMEUG00000006861	-	69	59.893	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025152	Gpatch4	77	45.771	ENSONIG00000002261	gpatch4	51	47.264	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025152	Gpatch4	80	81.771	ENSOCUG00000025781	-	99	54.253	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025152	Gpatch4	91	40.408	ENSORLG00020013892	gpatch4	59	44.860	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025152	Gpatch4	85	41.704	ENSORLG00015019725	gpatch4	60	44.860	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025152	Gpatch4	90	37.900	ENSOMEG00000000529	gpatch4	53	39.796	Oryzias_melastigma
MGP_CAROLIEiJ_G0025152	Gpatch4	82	83.673	ENSOGAG00000006698	-	72	72.347	Otolemur_garnettii
MGP_CAROLIEiJ_G0025152	Gpatch4	82	82.051	ENSOARG00000006123	GPATCH4	87	65.363	Ovis_aries
MGP_CAROLIEiJ_G0025152	Gpatch4	79	83.158	ENSPPAG00000028364	-	82	83.761	Pan_paniscus
MGP_CAROLIEiJ_G0025152	Gpatch4	98	74.786	ENSPPRG00000002106	GPATCH4	54	80.711	Panthera_pardus
MGP_CAROLIEiJ_G0025152	Gpatch4	100	75.314	ENSPTIG00000006717	GPATCH4	79	86.486	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025152	Gpatch4	79	83.158	ENSPTRG00000001464	GPATCH4	82	83.761	Pan_troglodytes
MGP_CAROLIEiJ_G0025152	Gpatch4	82	81.538	ENSPANG00000018543	GPATCH4	82	83.761	Papio_anubis
MGP_CAROLIEiJ_G0025152	Gpatch4	84	53.110	ENSPSIG00000011317	GPATCH4	74	50.935	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025152	Gpatch4	85	45.045	ENSPMAG00000009175	gpatch4	67	46.939	Petromyzon_marinus
MGP_CAROLIEiJ_G0025152	Gpatch4	84	43.578	ENSPFOG00000011835	gpatch4	56	43.578	Poecilia_formosa
MGP_CAROLIEiJ_G0025152	Gpatch4	84	43.119	ENSPLAG00000019504	gpatch4	56	43.119	Poecilia_latipinna
MGP_CAROLIEiJ_G0025152	Gpatch4	84	43.578	ENSPMEG00000001375	gpatch4	57	43.578	Poecilia_mexicana
MGP_CAROLIEiJ_G0025152	Gpatch4	84	41.743	ENSPREG00000017029	gpatch4	59	42.661	Poecilia_reticulata
MGP_CAROLIEiJ_G0025152	Gpatch4	85	81.683	ENSPPYG00000000711	-	91	57.664	Pongo_abelii
MGP_CAROLIEiJ_G0025152	Gpatch4	67	76.398	ENSPCOG00000013948	-	89	75.397	Propithecus_coquereli
MGP_CAROLIEiJ_G0025152	Gpatch4	66	84.076	ENSPCOG00000023130	-	76	85.714	Propithecus_coquereli
MGP_CAROLIEiJ_G0025152	Gpatch4	92	75.566	ENSPVAG00000007505	-	51	77.228	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	44.811	ENSPNYG00000018461	gpatch4	54	46.226	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025152	Gpatch4	99	95.798	ENSRNOG00000018969	Gpatch4	97	90.380	Rattus_norvegicus
MGP_CAROLIEiJ_G0025152	Gpatch4	84	81.500	ENSRBIG00000005742	GPATCH4	82	82.906	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025152	Gpatch4	84	81.500	ENSRROG00000044157	GPATCH4	82	82.906	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025152	Gpatch4	99	56.485	ENSSHAG00000015436	-	72	59.901	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025152	Gpatch4	77	44.608	ENSSDUG00000006583	gpatch4	53	47.032	Seriola_dumerili
MGP_CAROLIEiJ_G0025152	Gpatch4	77	44.608	ENSSLDG00000012365	gpatch4	53	47.032	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025152	Gpatch4	78	52.284	ENSSPUG00000002674	GPATCH4	66	52.792	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025152	Gpatch4	87	41.850	ENSSPAG00000011683	gpatch4	51	44.878	Stegastes_partitus
MGP_CAROLIEiJ_G0025152	Gpatch4	75	44.828	ENSTNIG00000005156	gpatch4	69	46.500	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025152	Gpatch4	99	77.637	ENSTTRG00000001113	GPATCH4	86	66.282	Tursiops_truncatus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	84.103	ENSUAMG00000013407	GPATCH4	98	56.512	Ursus_americanus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	84.103	ENSUMAG00000017797	GPATCH4	98	56.047	Ursus_maritimus
MGP_CAROLIEiJ_G0025152	Gpatch4	82	72.768	ENSVVUG00000006004	-	84	83.186	Vulpes_vulpes
MGP_CAROLIEiJ_G0025152	Gpatch4	77	47.236	ENSXETG00000020397	gpatch4	91	37.171	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025152	Gpatch4	92	41.880	ENSXCOG00000003911	gpatch4	57	43.925	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025152	Gpatch4	92	41.176	ENSXMAG00000024520	gpatch4	57	43.119	Xiphophorus_maculatus