EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025310 (Gene tree)
Gene ID: 110291525
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 21101 bases
Position: chr3:88586984-88608084
Accession: 110291525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0058978	KH_1	PF00013.29	1.8e-34	1	2
MGP_CAROLIEiJ_P0058978	KH_1	PF00013.29	1.8e-34	2	2
MGP_CAROLIEiJ_P0058977	KH_1	PF00013.29	1.2e-33	1	2
MGP_CAROLIEiJ_P0058977	KH_1	PF00013.29	1.2e-33	2	2
MGP_CAROLIEiJ_P0058980	KH_1	PF00013.29	5.6e-28	1	2
MGP_CAROLIEiJ_P0058980	KH_1	PF00013.29	5.6e-28	2	2
MGP_CAROLIEiJ_P0058979	KH_1	PF00013.29	2.9e-19	1	1
MGP_CAROLIEiJ_P0058979	TUDOR	PF00567.24	4.6e-29	1	1
MGP_CAROLIEiJ_P0058980	TUDOR	PF00567.24	5.2e-29	1	1
MGP_CAROLIEiJ_P0058977	TUDOR	PF00567.24	5.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0058979	-	2487	-	MGP_CAROLIEiJ_P0058979	515 (aa)	-	-
MGP_CAROLIEiJ_T0058978	-	1235	-	MGP_CAROLIEiJ_P0058978	296 (aa)	-	UPI00001C2CC6
MGP_CAROLIEiJ_T0058977	-	1759	-	MGP_CAROLIEiJ_P0058977	560 (aa)	-	UPI000A316E7F
MGP_CAROLIEiJ_T0058976	-	476	-	MGP_CAROLIEiJ_P0058976	50 (aa)	-	-
MGP_CAROLIEiJ_T0058980	-	2597	XM_021158722	MGP_CAROLIEiJ_P0058980	556 (aa)	XP_021014381	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0025310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025310	Tdrkh	52	30.625	MGP_CAROLIEiJ_G0028364	Igf2bp3	55	30.625
MGP_CAROLIEiJ_G0025310	Tdrkh	74	31.707	MGP_CAROLIEiJ_G0023413	Fubp3	79	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025310	Tdrkh	100	91.250	ENSG00000182134	TDRKH	100	98.473	Homo_sapiens
MGP_CAROLIEiJ_G0025310	Tdrkh	99	90.203	ENSAMEG00000000421	TDRKH	99	89.698	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025310	Tdrkh	85	56.939	ENSACAG00000007457	TDRKH	95	56.939	Anolis_carolinensis
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.893	ENSANAG00000021663	TDRKH	98	92.475	Aotus_nancymaae
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.714	ENSBTAG00000021594	TDRKH	99	90.714	Bos_taurus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	91.837	ENSCJAG00000007955	TDRKH	99	90.536	Callithrix_jacchus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.764	ENSCAFG00000012856	TDRKH	99	90.764	Canis_familiaris
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.764	ENSCAFG00020009606	TDRKH	99	90.764	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025310	Tdrkh	99	91.497	ENSCHIG00000025326	TDRKH	99	89.821	Capra_hircus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSTSYG00000010405	TDRKH	99	90.681	Carlito_syrichta
MGP_CAROLIEiJ_G0025310	Tdrkh	99	88.776	ENSCAPG00000007565	TDRKH	97	88.132	Cavia_aperea
MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.821	ENSCPOG00000003556	TDRKH	99	89.821	Cavia_porcellus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.536	ENSCCAG00000033931	TDRKH	99	90.536	Cebus_capucinus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSCATG00000041878	TDRKH	99	91.429	Cercocebus_atys
MGP_CAROLIEiJ_G0025310	Tdrkh	100	88.214	ENSCLAG00000001088	TDRKH	99	88.214	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSCSAG00000001820	TDRKH	99	91.429	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025310	Tdrkh	94	86.131	ENSCHOG00000000264	TDRKH	88	86.905	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025310	Tdrkh	94	62.847	ENSCPBG00000008824	TDRKH	89	63.401	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.177	ENSCANG00000037367	TDRKH	99	90.357	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025310	Tdrkh	96	67.138	ENSCGRG00001010793	-	90	68.100	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025310	Tdrkh	98	95.502	ENSCGRG00001006583	-	99	93.874	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025310	Tdrkh	98	70.588	ENSCGRG00001011699	-	99	68.148	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025310	Tdrkh	96	66.784	ENSCGRG00000012138	-	90	67.742	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025310	Tdrkh	98	70.588	ENSCGRG00000013230	-	99	67.963	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025310	Tdrkh	98	95.502	ENSCGRG00000012937	-	99	93.874	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025310	Tdrkh	92	91.636	ENSDNOG00000035650	TDRKH	100	88.439	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSDORG00000015322	Tdrkh	99	91.964	Dipodomys_ordii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	81.462	ENSETEG00000008020	TDRKH	99	81.462	Echinops_telfairi
MGP_CAROLIEiJ_G0025310	Tdrkh	87	36.452	ENSEBUG00000010481	TDRKH	83	36.257	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.177	ENSEASG00005005213	TDRKH	99	91.071	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSECAG00000013096	TDRKH	97	93.837	Equus_caballus
MGP_CAROLIEiJ_G0025310	Tdrkh	72	95.000	ENSEEUG00000015952	TDRKH	71	95.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.747	ENSFCAG00000010980	TDRKH	99	90.747	Felis_catus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	87.857	ENSFDAG00000015315	TDRKH	99	87.857	Fukomys_damarensis
MGP_CAROLIEiJ_G0025310	Tdrkh	97	56.182	ENSGALG00000031812	TDRKH	96	56.182	Gallus_gallus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	61.872	ENSGAGG00000005447	TDRKH	99	62.392	Gopherus_agassizii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSGGOG00000025419	TDRKH	98	93.042	Gorilla_gorilla
MGP_CAROLIEiJ_G0025310	Tdrkh	100	87.900	ENSHGLG00000007478	TDRKH	99	87.900	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025310	Tdrkh	100	87.900	ENSHGLG00100007927	TDRKH	99	87.900	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025310	Tdrkh	100	91.964	ENSSTOG00000006506	TDRKH	99	91.964	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	91.186	ENSJJAG00000000323	Tdrkh	99	90.893	Jaculus_jaculus
MGP_CAROLIEiJ_G0025310	Tdrkh	75	60.699	ENSLACG00000017639	TDRKH	98	54.878	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025310	Tdrkh	99	87.701	ENSLAFG00000006274	TDRKH	99	87.701	Loxodonta_africana
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.537	ENSMFAG00000041641	TDRKH	99	91.786	Macaca_fascicularis
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.537	ENSMMUG00000009096	TDRKH	97	93.439	Macaca_mulatta
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.537	ENSMNEG00000021524	TDRKH	99	91.786	Macaca_nemestrina
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSMLEG00000033882	TDRKH	99	91.429	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	94.558	ENSMAUG00000019159	Tdrkh	99	92.819	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	71.964	ENSMICG00000042330	-	99	72.283	Microcebus_murinus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSMICG00000010682	-	99	91.607	Microcebus_murinus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	71.429	ENSMOCG00000014074	-	97	66.300	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.517	ENSMOCG00000002113	-	99	84.560	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025310	Tdrkh	100	81.019	ENSMODG00000018906	TDRKH	96	81.019	Monodelphis_domestica
MGP_CAROLIEiJ_G0025310	Tdrkh	100	100.000	ENSMUSG00000041912	Tdrkh	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	98.986	MGP_PahariEiJ_G0026753	Tdrkh	100	98.986	Mus_pahari
MGP_CAROLIEiJ_G0025310	Tdrkh	100	100.000	MGP_SPRETEiJ_G0026252	Tdrkh	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	90.878	ENSMPUG00000003558	TDRKH	99	90.036	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025310	Tdrkh	99	89.456	ENSMLUG00000002213	TDRKH	99	88.393	Myotis_lucifugus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	94.286	ENSNGAG00000017825	Tdrkh	100	94.286	Nannospalax_galili
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.517	ENSNLEG00000010284	TDRKH	98	92.644	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025310	Tdrkh	95	94.805	ENSMEUG00000006144	TDRKH	89	94.805	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025310	Tdrkh	86	90.909	ENSOPRG00000016049	TDRKH	80	90.909	Ochotona_princeps
MGP_CAROLIEiJ_G0025310	Tdrkh	100	88.036	ENSODEG00000009532	-	99	88.036	Octodon_degus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	86.511	ENSODEG00000001075	-	99	86.511	Octodon_degus
MGP_CAROLIEiJ_G0025310	Tdrkh	62	72.340	ENSOANG00000001094	-	88	72.340	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	86.735	ENSOCUG00000001387	TDRKH	100	79.286	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025310	Tdrkh	98	75.517	ENSOGAG00000030085	-	98	73.793	Otolemur_garnettii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	87.075	ENSOGAG00000001839	-	99	81.834	Otolemur_garnettii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	74.729	ENSOGAG00000032601	-	99	74.729	Otolemur_garnettii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	91.497	ENSOARG00000021052	TDRKH	99	89.821	Ovis_aries
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSPPAG00000028994	TDRKH	99	91.607	Pan_paniscus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.568	ENSPPRG00000001585	TDRKH	99	91.281	Panthera_pardus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.568	ENSPTIG00000019916	TDRKH	99	91.281	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025310	Tdrkh	99	93.197	ENSPTRG00000001297	TDRKH	98	93.241	Pan_troglodytes
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSPANG00000001986	TDRKH	99	91.429	Papio_anubis
MGP_CAROLIEiJ_G0025310	Tdrkh	93	62.011	ENSPSIG00000008541	TDRKH	100	62.011	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025310	Tdrkh	99	98.299	ENSPEMG00000011171	Tdrkh	100	96.786	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025310	Tdrkh	100	81.579	ENSPCIG00000021201	TDRKH	99	81.579	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.857	ENSPPYG00000000855	TDRKH	99	91.607	Pongo_abelii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	91.497	ENSPCOG00000027505	TDRKH	99	89.286	Propithecus_coquereli
MGP_CAROLIEiJ_G0025310	Tdrkh	100	86.607	ENSPVAG00000005234	TDRKH	99	86.607	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	99.660	ENSRNOG00000020860	Tdrkh	100	98.393	Rattus_norvegicus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.517	ENSRBIG00000044860	TDRKH	99	91.429	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025310	Tdrkh	99	92.517	ENSRROG00000036923	TDRKH	99	91.429	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.541	ENSSBOG00000034454	TDRKH	93	80.753	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025310	Tdrkh	100	81.722	ENSSHAG00000015859	TDRKH	88	81.722	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025310	Tdrkh	99	88.776	ENSSARG00000008525	TDRKH	99	78.533	Sorex_araneus
MGP_CAROLIEiJ_G0025310	Tdrkh	98	57.475	ENSSPUG00000002369	TDRKH	95	62.261	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025310	Tdrkh	99	90.476	ENSSSCG00000027770	TDRKH	100	89.068	Sus_scrofa
MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.821	ENSTBEG00000011201	TDRKH	99	89.821	Tupaia_belangeri
MGP_CAROLIEiJ_G0025310	Tdrkh	100	82.321	ENSTTRG00000003149	TDRKH	99	82.321	Tursiops_truncatus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.680	ENSUAMG00000019589	TDRKH	99	89.680	Ursus_americanus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.858	ENSUMAG00000001456	TDRKH	99	89.858	Ursus_maritimus
MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.893	ENSVPAG00000000666	TDRKH	99	90.893	Vicugna_pacos
MGP_CAROLIEiJ_G0025310	Tdrkh	100	91.281	ENSVVUG00000013241	TDRKH	99	91.845	Vulpes_vulpes
MGP_CAROLIEiJ_G0025310	Tdrkh	94	39.455	ENSXETG00000019909	tdrkh	91	40.377	Xenopus_tropicalis