EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025342 (Gene tree)
Gene ID: 110291522
Gene Symbol: Setdb1
Alias: ESET|KMT1E
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 33919 bases
Position: chr3:89429994-89463912
Accession: 110291522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0059168	MBD	PF01429.19	3e-12	1	1
MGP_CAROLIEiJ_P0059166	MBD	PF01429.19	3e-12	1	1
MGP_CAROLIEiJ_P0059167	MBD	PF01429.19	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0059167	-	4656	-	MGP_CAROLIEiJ_P0059167	1305 (aa)	-	UPI000A3188C6
MGP_CAROLIEiJ_T0059166	-	4620	XM_021158712	MGP_CAROLIEiJ_P0059166	1305 (aa)	XP_021014371	UPI000A3188C6
MGP_CAROLIEiJ_T0059165	-	5568	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059169	-	2357	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059168	-	4571	XM_021158713	MGP_CAROLIEiJ_P0059168	1304 (aa)	XP_021014372	UPI000A3161AC
MGP_CAROLIEiJ_T0059170	-	643	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0025342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.666	ENSG00000143379	SETDB1	100	91.201	Homo_sapiens
MGP_CAROLIEiJ_G0025342	Setdb1	92	63.810	ENSAPOG00000016228	setdb1b	99	69.355	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.722	ENSAMEG00000001160	SETDB1	100	90.798	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025342	Setdb1	88	70.109	ENSACIG00000007359	setdb1b	99	70.109	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025342	Setdb1	89	68.041	ENSAOCG00000005586	setdb1b	99	68.041	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025342	Setdb1	80	68.041	ENSAPEG00000007774	setdb1b	99	68.041	Amphiprion_percula
MGP_CAROLIEiJ_G0025342	Setdb1	93	62.100	ENSATEG00000023520	setdb1b	99	68.817	Anabas_testudineus
MGP_CAROLIEiJ_G0025342	Setdb1	99	75.287	ENSAPLG00000013908	SETDB1	99	74.580	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.055	ENSANAG00000001819	SETDB1	100	91.667	Aotus_nancymaae
MGP_CAROLIEiJ_G0025342	Setdb1	89	69.565	ENSACLG00000020489	setdb1b	98	70.109	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025342	Setdb1	69	66.165	ENSAMXG00000010030	setdb1a	61	66.165	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025342	Setdb1	92	59.076	ENSAMXG00000016168	setdb1b	81	61.246	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.902	ENSBTAG00000000098	SETDB1	100	91.208	Bos_taurus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.131	ENSCJAG00000006972	SETDB1	100	91.590	Callithrix_jacchus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.763	ENSCAFG00000023501	SETDB1	100	90.992	Canis_familiaris
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.694	ENSCAFG00020013596	SETDB1	100	90.923	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.041	ENSCHIG00000010698	SETDB1	100	91.271	Capra_hircus
MGP_CAROLIEiJ_G0025342	Setdb1	81	90.161	ENSTSYG00000012646	SETDB1	100	90.350	Carlito_syrichta
MGP_CAROLIEiJ_G0025342	Setdb1	81	93.145	ENSCAPG00000013619	SETDB1	97	92.063	Cavia_aperea
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.352	ENSCPOG00000001632	SETDB1	100	90.735	Cavia_porcellus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.201	ENSCCAG00000024882	SETDB1	100	91.660	Cebus_capucinus
MGP_CAROLIEiJ_G0025342	Setdb1	100	87.309	ENSCATG00000044888	SETDB1	100	87.844	Cercocebus_atys
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.726	ENSCLAG00000000242	SETDB1	100	90.259	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025342	Setdb1	88	91.082	ENSCSAG00000018034	SETDB1	100	91.688	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025342	Setdb1	100	81.714	ENSCHOG00000004013	SETDB1	100	81.714	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025342	Setdb1	99	76.475	ENSCPBG00000008716	SETDB1	99	76.346	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025342	Setdb1	86	92.637	ENSCANG00000036388	SETDB1	95	92.752	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025342	Setdb1	100	93.257	ENSCGRG00001010822	Setdb1	100	93.257	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025342	Setdb1	100	92.874	ENSCGRG00000005953	Setdb1	100	92.874	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025342	Setdb1	89	64.390	ENSCSEG00000002988	setdb1b	98	70.270	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025342	Setdb1	90	69.110	ENSCVAG00000008877	setdb1b	99	69.110	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025342	Setdb1	87	72.727	ENSDARG00000099021	setdb1b	97	73.446	Danio_rerio
MGP_CAROLIEiJ_G0025342	Setdb1	63	64.626	ENSDARG00000041243	setdb1a	73	64.626	Danio_rerio
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.494	ENSDNOG00000007754	SETDB1	100	91.027	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025342	Setdb1	100	88.617	ENSDORG00000006830	Setdb1	100	88.846	Dipodomys_ordii
MGP_CAROLIEiJ_G0025342	Setdb1	71	47.379	ENSEBUG00000005735	setdb1b	95	46.192	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.361	ENSEASG00005002061	SETDB1	100	91.743	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.514	ENSECAG00000023954	SETDB1	100	91.820	Equus_caballus
MGP_CAROLIEiJ_G0025342	Setdb1	83	90.756	ENSEEUG00000015825	SETDB1	83	90.756	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025342	Setdb1	63	69.149	ENSELUG00000006204	-	71	69.149	Esox_lucius
MGP_CAROLIEiJ_G0025342	Setdb1	88	76.923	ENSELUG00000013948	setdb1b	98	76.923	Esox_lucius
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.280	ENSFCAG00000009655	SETDB1	100	89.272	Felis_catus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.666	ENSFDAG00000021515	SETDB1	100	90.895	Fukomys_damarensis
MGP_CAROLIEiJ_G0025342	Setdb1	97	53.761	ENSFHEG00000022195	setdb1b	98	69.110	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025342	Setdb1	87	77.059	ENSGMOG00000005993	setdb1b	93	77.059	Gadus_morhua
MGP_CAROLIEiJ_G0025342	Setdb1	99	72.755	ENSGALG00000024051	SETDB1	91	72.387	Gallus_gallus
MGP_CAROLIEiJ_G0025342	Setdb1	85	64.213	ENSGAFG00000012805	setdb1b	98	59.868	Gambusia_affinis
MGP_CAROLIEiJ_G0025342	Setdb1	87	73.099	ENSGACG00000011675	setdb1b	93	74.269	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025342	Setdb1	99	76.551	ENSGAGG00000005348	SETDB1	99	76.422	Gopherus_agassizii
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.596	ENSGGOG00000016308	SETDB1	100	91.131	Gorilla_gorilla
MGP_CAROLIEiJ_G0025342	Setdb1	89	69.565	ENSHBUG00000004618	setdb1b	98	70.109	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.832	ENSHGLG00000011098	SETDB1	100	90.138	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.059	ENSHGLG00100009789	SETDB1	100	89.365	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025342	Setdb1	90	68.649	ENSHCOG00000014567	setdb1b	98	69.189	Hippocampus_comes
MGP_CAROLIEiJ_G0025342	Setdb1	89	66.337	ENSIPUG00000004536	setdb1	98	72.626	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.192	ENSSTOG00000006770	SETDB1	100	91.648	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025342	Setdb1	89	68.421	ENSKMAG00000001197	setdb1b	99	68.947	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025342	Setdb1	88	68.108	ENSLBEG00000025862	setdb1b	96	68.649	Labrus_bergylta
MGP_CAROLIEiJ_G0025342	Setdb1	99	69.184	ENSLACG00000011159	SETDB1	99	68.271	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.679	ENSLAFG00000004006	SETDB1	100	89.908	Loxodonta_africana
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.819	ENSMFAG00000042328	SETDB1	100	91.354	Macaca_fascicularis
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.826	ENSMMUG00000023235	SETDB1	100	91.284	Macaca_mulatta
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.742	ENSMNEG00000017223	SETDB1	100	91.278	Macaca_nemestrina
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.819	ENSMLEG00000033050	SETDB1	100	91.354	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025342	Setdb1	90	68.889	ENSMAMG00000015176	setdb1b	85	69.444	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025342	Setdb1	89	69.565	ENSMZEG00005016099	setdb1b	98	70.109	Maylandia_zebra
MGP_CAROLIEiJ_G0025342	Setdb1	87	71.083	ENSMGAG00000001018	SETDB1	97	70.857	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025342	Setdb1	88	93.691	ENSMAUG00000021391	Setdb1	100	93.691	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.159	ENSMICG00000000425	SETDB1	100	91.159	Microcebus_murinus
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.793	ENSMOCG00000017407	Setdb1	100	92.021	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025342	Setdb1	90	64.706	ENSMMOG00000016162	setdb1b	99	68.984	Mola_mola
MGP_CAROLIEiJ_G0025342	Setdb1	99	84.977	ENSMODG00000018821	SETDB1	90	84.900	Monodelphis_domestica
MGP_CAROLIEiJ_G0025342	Setdb1	88	76.074	ENSMALG00000007801	setdb1b	98	76.074	Monopterus_albus
MGP_CAROLIEiJ_G0025342	Setdb1	100	98.853	ENSMUSG00000015697	Setdb1	100	98.853	Mus_musculus
MGP_CAROLIEiJ_G0025342	Setdb1	100	86.113	ENSMPUG00000004298	SETDB1	100	86.566	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.142	ENSMLUG00000010486	SETDB1	100	89.446	Myotis_lucifugus
MGP_CAROLIEiJ_G0025342	Setdb1	100	88.506	ENSNGAG00000020151	Setdb1	100	89.732	Nannospalax_galili
MGP_CAROLIEiJ_G0025342	Setdb1	96	56.492	ENSNBRG00000003147	setdb1b	99	70.652	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025342	Setdb1	100	87.472	ENSNLEG00000009996	SETDB1	100	88.075	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025342	Setdb1	87	86.951	ENSMEUG00000006544	-	88	87.366	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025342	Setdb1	100	77.786	ENSMEUG00000000555	-	100	77.786	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025342	Setdb1	97	88.635	ENSOPRG00000015349	SETDB1	100	88.792	Ochotona_princeps
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.188	ENSODEG00000012471	SETDB1	100	91.111	Octodon_degus
MGP_CAROLIEiJ_G0025342	Setdb1	88	69.565	ENSONIG00000006454	setdb1b	98	70.109	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.291	ENSOCUG00000003642	SETDB1	100	90.520	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025342	Setdb1	94	65.347	ENSORLG00000010602	setdb1b	98	67.526	Oryzias_latipes
MGP_CAROLIEiJ_G0025342	Setdb1	94	63.768	ENSORLG00015014543	setdb1b	98	65.829	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025342	Setdb1	91	65.672	ENSOMEG00000009457	setdb1b	98	68.750	Oryzias_melastigma
MGP_CAROLIEiJ_G0025342	Setdb1	100	85.911	ENSOGAG00000010320	SETDB1	100	86.217	Otolemur_garnettii
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.694	ENSOARG00000020880	SETDB1	100	90.923	Ovis_aries
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.520	ENSPPAG00000041015	SETDB1	100	90.979	Pan_paniscus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.436	ENSPPRG00000005462	SETDB1	100	90.742	Panthera_pardus
MGP_CAROLIEiJ_G0025342	Setdb1	100	89.885	ENSPTIG00000014233	SETDB1	100	90.038	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.443	ENSPTRG00000001267	SETDB1	100	90.979	Pan_troglodytes
MGP_CAROLIEiJ_G0025342	Setdb1	100	88.150	ENSPANG00000020214	SETDB1	100	88.838	Papio_anubis
MGP_CAROLIEiJ_G0025342	Setdb1	98	56.041	ENSPKIG00000010963	setdb1b	100	59.006	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025342	Setdb1	56	77.432	ENSPSIG00000008407	SETDB1	85	76.590	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025342	Setdb1	93	94.171	ENSPEMG00000010553	Setdb1	99	94.171	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025342	Setdb1	98	50.231	ENSPMAG00000001573	setdb1b	92	71.676	Petromyzon_marinus
MGP_CAROLIEiJ_G0025342	Setdb1	98	56.575	ENSPFOG00000004623	-	98	56.555	Poecilia_formosa
MGP_CAROLIEiJ_G0025342	Setdb1	96	56.688	ENSPFOG00000004429	setdb1b	99	60.000	Poecilia_formosa
MGP_CAROLIEiJ_G0025342	Setdb1	96	54.619	ENSPLAG00000017117	setdb1b	98	62.667	Poecilia_latipinna
MGP_CAROLIEiJ_G0025342	Setdb1	97	55.182	ENSPLAG00000019076	-	99	69.149	Poecilia_latipinna
MGP_CAROLIEiJ_G0025342	Setdb1	99	54.709	ENSPMEG00000006468	setdb1b	99	55.302	Poecilia_mexicana
MGP_CAROLIEiJ_G0025342	Setdb1	99	54.529	ENSPREG00000017459	setdb1b	99	55.261	Poecilia_reticulata
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.742	ENSPPYG00000000887	SETDB1	100	91.354	Pongo_abelii
MGP_CAROLIEiJ_G0025342	Setdb1	85	88.500	ENSPCAG00000002527	SETDB1	100	88.859	Procavia_capensis
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.125	ENSPCOG00000027869	SETDB1	100	91.660	Propithecus_coquereli
MGP_CAROLIEiJ_G0025342	Setdb1	94	88.355	ENSPVAG00000004355	SETDB1	93	88.662	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025342	Setdb1	88	69.565	ENSPNYG00000003997	setdb1b	91	70.109	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025342	Setdb1	79	66.245	ENSPNAG00000021617	setdb1b	89	71.739	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025342	Setdb1	62	63.014	ENSPNAG00000003444	setdb1a	56	63.014	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025342	Setdb1	100	96.705	ENSRNOG00000021143	Setdb1	100	96.705	Rattus_norvegicus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.895	ENSRBIG00000042359	SETDB1	100	91.431	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.902	ENSRROG00000032628	SETDB1	100	91.437	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025342	Setdb1	100	91.284	ENSSBOG00000028608	SETDB1	100	91.743	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025342	Setdb1	100	84.686	ENSSHAG00000012701	SETDB1	100	84.456	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025342	Setdb1	86	69.347	ENSSFOG00015022183	setdb1	99	56.696	Scleropages_formosus
MGP_CAROLIEiJ_G0025342	Setdb1	92	64.929	ENSSDUG00000007513	setdb1b	99	68.750	Seriola_dumerili
MGP_CAROLIEiJ_G0025342	Setdb1	56	64.929	ENSSLDG00000015209	setdb1b	99	69.072	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025342	Setdb1	99	74.365	ENSSPUG00000002969	SETDB1	99	73.903	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.229	ENSSSCG00000006645	SETDB1	100	90.493	Sus_scrofa
MGP_CAROLIEiJ_G0025342	Setdb1	94	71.463	ENSTGUG00000004684	SETDB1	100	71.009	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025342	Setdb1	87	67.914	ENSTRUG00000014641	setdb1b	93	67.914	Takifugu_rubripes
MGP_CAROLIEiJ_G0025342	Setdb1	99	52.671	ENSTNIG00000008065	setdb1b	98	53.566	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025342	Setdb1	93	91.825	ENSTBEG00000009306	SETDB1	100	92.073	Tupaia_belangeri
MGP_CAROLIEiJ_G0025342	Setdb1	89	89.754	ENSTTRG00000006966	SETDB1	89	90.345	Tursiops_truncatus
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.327	ENSUAMG00000026724	SETDB1	100	90.708	Ursus_americanus
MGP_CAROLIEiJ_G0025342	Setdb1	100	86.414	ENSUMAG00000003141	SETDB1	100	86.785	Ursus_maritimus
MGP_CAROLIEiJ_G0025342	Setdb1	75	95.238	ENSVPAG00000005440	SETDB1	78	95.238	Vicugna_pacos
MGP_CAROLIEiJ_G0025342	Setdb1	100	90.618	ENSVVUG00000011637	SETDB1	100	90.770	Vulpes_vulpes
MGP_CAROLIEiJ_G0025342	Setdb1	99	68.979	ENSXETG00000008936	setdb1	99	68.674	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025342	Setdb1	98	55.096	ENSXCOG00000019497	setdb1b	87	72.881	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025342	Setdb1	99	54.973	ENSXMAG00000016600	setdb1b	99	55.393	Xiphophorus_maculatus