EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025352 (Gene tree)
Gene ID: 110290749
Gene Symbol: Tars2
Alias: 2610024N01Rik|Tarsl1
Full Name: threonyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 22154 bases
Position: chr3:89820961-89843114
Accession: 110290749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0059225	tRNA_SAD	PF07973.14	1.2e-11	1	1
MGP_CAROLIEiJ_P0059221	tRNA_SAD	PF07973.14	2.2e-11	1	1
MGP_CAROLIEiJ_P0059216	tRNA_SAD	PF07973.14	4.8e-11	1	1
MGP_CAROLIEiJ_P0059214	tRNA_SAD	PF07973.14	5.1e-11	1	1
MGP_CAROLIEiJ_P0059217	tRNA_SAD	PF07973.14	5.5e-11	1	1
MGP_CAROLIEiJ_P0059224	tRNA_SAD	PF07973.14	7.9e-10	1	1
MGP_CAROLIEiJ_P0059223	tRNA_SAD	PF07973.14	5.6e-09	1	1
MGP_CAROLIEiJ_P0059217	HGTP_anticodon	PF03129.20	3.8e-17	1	1
MGP_CAROLIEiJ_P0059216	HGTP_anticodon	PF03129.20	4e-17	1	1
MGP_CAROLIEiJ_P0059214	HGTP_anticodon	PF03129.20	4.3e-17	1	1
MGP_CAROLIEiJ_P0059217	tRNA-synt_2b	PF00587.25	2.5e-31	1	1
MGP_CAROLIEiJ_P0059214	tRNA-synt_2b	PF00587.25	2.7e-31	1	1
MGP_CAROLIEiJ_P0059216	tRNA-synt_2b	PF00587.25	2.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0059219	-	2037	-	MGP_CAROLIEiJ_P0059219	177 (aa)	-	-
MGP_CAROLIEiJ_T0059218	-	1981	-	MGP_CAROLIEiJ_P0059218	264 (aa)	-	-
MGP_CAROLIEiJ_T0059230	-	732	-	MGP_CAROLIEiJ_P0059230	79 (aa)	-	UPI000620AB82
MGP_CAROLIEiJ_T0059215	-	3593	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059214	-	2735	XM_021157458	MGP_CAROLIEiJ_P0059214	723 (aa)	XP_021013117	UPI000A31AD0F
MGP_CAROLIEiJ_T0059217	-	2157	-	MGP_CAROLIEiJ_P0059217	642 (aa)	-	-
MGP_CAROLIEiJ_T0059216	-	2313	-	MGP_CAROLIEiJ_P0059216	697 (aa)	-	-
MGP_CAROLIEiJ_T0059224	-	946	-	MGP_CAROLIEiJ_P0059224	142 (aa)	-	-
MGP_CAROLIEiJ_T0059225	-	661	-	MGP_CAROLIEiJ_P0059225	209 (aa)	-	-
MGP_CAROLIEiJ_T0059226	-	636	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059227	-	457	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059220	-	577	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059221	-	3334	-	MGP_CAROLIEiJ_P0059221	423 (aa)	-	-
MGP_CAROLIEiJ_T0059222	-	643	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059223	-	623	-	MGP_CAROLIEiJ_P0059223	104 (aa)	-	UPI000620AB80
MGP_CAROLIEiJ_T0059231	-	626	-	MGP_CAROLIEiJ_P0059231	11 (aa)	-	UPI000620AA78
MGP_CAROLIEiJ_T0059228	-	787	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059229	-	714	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0025352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025352	Tars2	99	60.000	MGP_CAROLIEiJ_G0019674	Tars	93	54.703
MGP_CAROLIEiJ_G0025352	Tars2	99	60.000	MGP_CAROLIEiJ_G0029834	Tarsl2	85	54.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSG00000143374	TARS2	100	83.541	Homo_sapiens
MGP_CAROLIEiJ_G0025352	Tars2	99	89.041	ENSAMEG00000001547	TARS2	100	84.232	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025352	Tars2	99	90.714	ENSANAG00000019620	TARS2	100	83.541	Aotus_nancymaae
MGP_CAROLIEiJ_G0025352	Tars2	100	85.915	ENSBTAG00000003799	TARS2	100	82.711	Bos_taurus
MGP_CAROLIEiJ_G0025352	Tars2	99	90.714	ENSCJAG00000006429	TARS2	100	83.126	Callithrix_jacchus
MGP_CAROLIEiJ_G0025352	Tars2	100	90.667	ENSCAFG00000011941	TARS2	100	82.434	Canis_familiaris
MGP_CAROLIEiJ_G0025352	Tars2	100	90.667	ENSCAFG00020019615	TARS2	100	82.434	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025352	Tars2	100	85.915	ENSCHIG00000018559	TARS2	100	82.434	Capra_hircus
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSTSYG00000003903	TARS2	100	84.786	Carlito_syrichta
MGP_CAROLIEiJ_G0025352	Tars2	79	80.357	ENSCAPG00000004123	-	100	80.973	Cavia_aperea
MGP_CAROLIEiJ_G0025352	Tars2	99	84.397	ENSCPOG00000010586	-	100	81.724	Cavia_porcellus
MGP_CAROLIEiJ_G0025352	Tars2	99	91.429	ENSCCAG00000034305	TARS2	100	83.264	Cebus_capucinus
MGP_CAROLIEiJ_G0025352	Tars2	99	85.000	ENSCATG00000034784	TARS2	100	83.421	Cercocebus_atys
MGP_CAROLIEiJ_G0025352	Tars2	99	85.106	ENSCLAG00000017274	TARS2	100	84.138	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSCSAG00000018075	TARS2	100	83.956	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025352	Tars2	94	79.435	ENSCHOG00000000796	-	81	79.435	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSCANG00000035036	TARS2	94	85.405	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025352	Tars2	100	95.070	ENSCGRG00001023517	Tars2	100	92.927	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025352	Tars2	100	95.070	ENSCGRG00000007836	Tars2	100	92.927	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025352	Tars2	99	93.151	ENSDNOG00000005934	TARS2	100	83.126	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025352	Tars2	100	88.028	ENSDORG00000007569	Tars2	100	88.028	Dipodomys_ordii
MGP_CAROLIEiJ_G0025352	Tars2	100	90.667	ENSETEG00000008569	TARS2	100	76.349	Echinops_telfairi
MGP_CAROLIEiJ_G0025352	Tars2	99	91.781	ENSEASG00005001587	TARS2	100	83.679	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025352	Tars2	99	91.781	ENSECAG00000014276	TARS2	100	83.817	Equus_caballus
MGP_CAROLIEiJ_G0025352	Tars2	100	84.507	ENSEEUG00000012661	-	72	92.308	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025352	Tars2	87	91.489	ENSEEUG00000000186	-	78	82.682	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025352	Tars2	100	88.000	ENSFCAG00000001702	TARS2	100	84.073	Felis_catus
MGP_CAROLIEiJ_G0025352	Tars2	99	85.714	ENSFDAG00000012739	TARS2	99	83.826	Fukomys_damarensis
MGP_CAROLIEiJ_G0025352	Tars2	99	91.429	ENSGGOG00000006311	TARS2	100	85.010	Gorilla_gorilla
MGP_CAROLIEiJ_G0025352	Tars2	99	83.571	ENSHGLG00000009219	TARS2	100	82.540	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025352	Tars2	99	83.571	ENSHGLG00100008254	TARS2	100	79.862	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025352	Tars2	100	90.141	ENSSTOG00000008311	TARS2	100	87.795	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025352	Tars2	99	90.000	ENSJJAG00000021883	Tars2	100	87.598	Jaculus_jaculus
MGP_CAROLIEiJ_G0025352	Tars2	100	89.437	ENSLAFG00000004979	TARS2	100	82.320	Loxodonta_africana
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSMFAG00000030387	TARS2	100	83.541	Macaca_fascicularis
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSMMUG00000006256	TARS2	100	83.541	Macaca_mulatta
MGP_CAROLIEiJ_G0025352	Tars2	85	92.562	ENSMNEG00000042066	TARS2	100	68.668	Macaca_nemestrina
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSMLEG00000030174	TARS2	100	83.126	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025352	Tars2	99	61.429	ENSMGAG00000000718	TARS2	100	60.781	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025352	Tars2	100	92.000	ENSMAUG00000008184	Tars2	100	91.552	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025352	Tars2	99	93.571	ENSMICG00000008016	TARS2	100	80.055	Microcebus_murinus
MGP_CAROLIEiJ_G0025352	Tars2	100	95.775	ENSMOCG00000018432	Tars2	100	93.307	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025352	Tars2	97	83.562	ENSMODG00000018792	TARS2	99	73.509	Monodelphis_domestica
MGP_CAROLIEiJ_G0025352	Tars2	100	100.000	ENSMUSG00000028107	Tars2	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0025352	Tars2	100	99.038	MGP_PahariEiJ_G0026796	Tars2	100	99.254	Mus_pahari
MGP_CAROLIEiJ_G0025352	Tars2	100	99.621	MGP_SPRETEiJ_G0026296	Tars2	100	99.621	Mus_spretus
MGP_CAROLIEiJ_G0025352	Tars2	99	91.781	ENSMPUG00000004795	TARS2	100	84.786	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025352	Tars2	99	91.781	ENSMLUG00000013123	TARS2	100	82.711	Myotis_lucifugus
MGP_CAROLIEiJ_G0025352	Tars2	100	90.141	ENSNGAG00000024279	-	100	90.141	Nannospalax_galili
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSNLEG00000009858	TARS2	100	83.817	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025352	Tars2	99	80.986	ENSMEUG00000014226	TARS2	92	78.782	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025352	Tars2	98	84.783	ENSOPRG00000010194	TARS2	88	84.783	Ochotona_princeps
MGP_CAROLIEiJ_G0025352	Tars2	99	88.652	ENSODEG00000011883	TARS2	100	84.646	Octodon_degus
MGP_CAROLIEiJ_G0025352	Tars2	95	82.963	ENSOGAG00000005360	TARS2	100	72.740	Otolemur_garnettii
MGP_CAROLIEiJ_G0025352	Tars2	100	87.324	ENSOARG00000020814	TARS2	100	83.149	Ovis_aries
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSPPAG00000042011	TARS2	100	83.402	Pan_paniscus
MGP_CAROLIEiJ_G0025352	Tars2	100	88.000	ENSPPRG00000019975	TARS2	100	83.551	Panthera_pardus
MGP_CAROLIEiJ_G0025352	Tars2	100	88.000	ENSPTIG00000008079	TARS2	100	83.812	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSPTRG00000001256	TARS2	100	83.541	Pan_troglodytes
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSPANG00000016774	TARS2	100	83.126	Papio_anubis
MGP_CAROLIEiJ_G0025352	Tars2	100	95.775	ENSPEMG00000014203	-	100	95.775	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025352	Tars2	99	80.986	ENSPCIG00000008884	TARS2	98	75.319	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSPPYG00000000898	TARS2	100	83.956	Pongo_abelii
MGP_CAROLIEiJ_G0025352	Tars2	99	84.932	ENSPCAG00000016619	TARS2	100	68.889	Procavia_capensis
MGP_CAROLIEiJ_G0025352	Tars2	99	90.714	ENSPCOG00000017247	TARS2	100	86.945	Propithecus_coquereli
MGP_CAROLIEiJ_G0025352	Tars2	99	87.143	ENSPVAG00000004340	TARS2	100	77.317	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025352	Tars2	100	96.479	ENSRNOG00000057194	Tars2	100	94.053	Rattus_norvegicus
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSRBIG00000044518	TARS2	99	86.008	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025352	Tars2	99	92.857	ENSRROG00000030946	TARS2	100	83.679	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025352	Tars2	99	90.714	ENSSBOG00000001108	TARS2	100	81.462	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025352	Tars2	99	81.690	ENSSHAG00000010286	TARS2	100	76.656	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025352	Tars2	99	82.857	ENSSARG00000013133	TARS2	100	77.424	Sorex_araneus
MGP_CAROLIEiJ_G0025352	Tars2	100	88.732	ENSSSCG00000026395	TARS2	99	84.570	Sus_scrofa
MGP_CAROLIEiJ_G0025352	Tars2	99	92.143	ENSTBEG00000003968	TARS2	82	81.250	Tupaia_belangeri
MGP_CAROLIEiJ_G0025352	Tars2	66	86.243	ENSTTRG00000010627	TARS2	80	86.243	Tursiops_truncatus
MGP_CAROLIEiJ_G0025352	Tars2	97	81.323	ENSUAMG00000023983	TARS2	96	88.571	Ursus_americanus
MGP_CAROLIEiJ_G0025352	Tars2	99	90.411	ENSUMAG00000003705	TARS2	100	84.509	Ursus_maritimus
MGP_CAROLIEiJ_G0025352	Tars2	89	80.085	ENSVPAG00000005427	TARS2	74	82.576	Vicugna_pacos
MGP_CAROLIEiJ_G0025352	Tars2	100	90.667	ENSVVUG00000009226	TARS2	100	82.849	Vulpes_vulpes