EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025401 (Gene tree)
Gene ID: 110291276
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Snf2p
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 49773 bases
Position: chr3:91617380-91667152
Accession: 110291276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0059413	ResIII	PF04851.15	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0059413	-	3005	XM_021158320	MGP_CAROLIEiJ_P0059413	901 (aa)	XP_021013979	-
MGP_CAROLIEiJ_T0059416	-	2947	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059415	-	500	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059414	-	2682	-	MGP_CAROLIEiJ_P0059414	893 (aa)	-	UPI000A315D31

Gene Model

Click here to download MGP_CAROLIEiJ_G0025401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025401	Chd1l	61	44.304	MGP_CAROLIEiJ_G0033034	Smarca1	73	43.363
MGP_CAROLIEiJ_G0025401	Chd1l	50	32.163	MGP_CAROLIEiJ_G0018635	-	78	32.163
MGP_CAROLIEiJ_G0025401	Chd1l	54	30.286	MGP_CAROLIEiJ_G0026325	Rad54l	68	30.286
MGP_CAROLIEiJ_G0025401	Chd1l	54	39.184	MGP_CAROLIEiJ_G0022930	Hells	68	39.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025401	Chd1l	99	86.242	ENSG00000131778	CHD1L	100	87.581	Homo_sapiens
MGP_CAROLIEiJ_G0025401	Chd1l	96	64.953	ENSAPOG00000001539	chd1l	98	64.925	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025401	Chd1l	99	84.978	ENSAMEG00000017063	CHD1L	99	84.978	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025401	Chd1l	95	66.433	ENSACIG00000001164	chd1l	97	66.317	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.794	ENSAOCG00000014510	chd1l	86	65.098	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025401	Chd1l	96	62.718	ENSAPEG00000017573	chd1l	94	62.718	Amphiprion_percula
MGP_CAROLIEiJ_G0025401	Chd1l	98	61.812	ENSAPEG00000017450	chd1l	96	62.500	Amphiprion_percula
MGP_CAROLIEiJ_G0025401	Chd1l	98	65.029	ENSATEG00000013058	chd1l	93	65.029	Anabas_testudineus
MGP_CAROLIEiJ_G0025401	Chd1l	95	72.909	ENSAPLG00000009976	CHD1L	96	72.286	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025401	Chd1l	98	67.673	ENSACAG00000017686	CHD1L	99	67.514	Anolis_carolinensis
MGP_CAROLIEiJ_G0025401	Chd1l	97	87.271	ENSANAG00000024347	CHD1L	99	85.730	Aotus_nancymaae
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.874	ENSACLG00000019304	chd1l	97	64.172	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025401	Chd1l	99	59.730	ENSAMXG00000012367	chd1l	88	59.730	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025401	Chd1l	98	86.644	ENSBTAG00000020831	CHD1L	99	85.874	Bos_taurus
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.698	ENSCJAG00000002406	CHD1L	99	85.698	Callithrix_jacchus
MGP_CAROLIEiJ_G0025401	Chd1l	99	82.002	ENSCAFG00000010944	CHD1L	98	82.022	Canis_familiaris
MGP_CAROLIEiJ_G0025401	Chd1l	99	83.648	ENSCAFG00020020121	CHD1L	99	83.648	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.714	ENSCHIG00000013871	CHD1L	99	85.827	Capra_hircus
MGP_CAROLIEiJ_G0025401	Chd1l	96	87.865	ENSTSYG00000003005	CHD1L	100	87.865	Carlito_syrichta
MGP_CAROLIEiJ_G0025401	Chd1l	98	83.955	ENSCPOG00000009000	CHD1L	100	83.167	Cavia_porcellus
MGP_CAROLIEiJ_G0025401	Chd1l	99	82.905	ENSCCAG00000036079	CHD1L	99	82.905	Cebus_capucinus
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.571	ENSCATG00000031044	CHD1L	99	86.816	Cercocebus_atys
MGP_CAROLIEiJ_G0025401	Chd1l	98	85.552	ENSCLAG00000000880	CHD1L	100	85.206	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.685	ENSCSAG00000018386	CHD1L	99	86.816	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025401	Chd1l	98	74.230	ENSCPBG00000002600	CHD1L	99	73.649	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.140	ENSCANG00000020239	CHD1L	99	85.140	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025401	Chd1l	98	90.400	ENSCGRG00001021624	Chd1l	99	89.597	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025401	Chd1l	93	90.396	ENSCGRG00000007554	Chd1l	99	89.554	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.123	ENSCVAG00000002595	chd1l	90	64.103	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025401	Chd1l	98	65.672	ENSDARG00000015471	chd1l	87	64.548	Danio_rerio
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.794	ENSDNOG00000019504	CHD1L	99	85.794	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025401	Chd1l	100	80.243	ENSDORG00000013555	Chd1l	100	80.684	Dipodomys_ordii
MGP_CAROLIEiJ_G0025401	Chd1l	89	78.075	ENSETEG00000008445	CHD1L	88	78.788	Echinops_telfairi
MGP_CAROLIEiJ_G0025401	Chd1l	66	62.903	ENSEBUG00000005791	chd1l	77	62.903	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.489	ENSEASG00005007364	CHD1L	100	86.772	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.377	ENSECAG00000008915	CHD1L	100	86.650	Equus_caballus
MGP_CAROLIEiJ_G0025401	Chd1l	96	55.275	ENSELUG00000016844	chd1l	85	54.730	Esox_lucius
MGP_CAROLIEiJ_G0025401	Chd1l	98	84.755	ENSFCAG00000007777	CHD1L	99	84.564	Felis_catus
MGP_CAROLIEiJ_G0025401	Chd1l	99	70.404	ENSFALG00000006087	CHD1L	98	70.661	Ficedula_albicollis
MGP_CAROLIEiJ_G0025401	Chd1l	96	85.764	ENSFDAG00000012431	CHD1L	100	86.295	Fukomys_damarensis
MGP_CAROLIEiJ_G0025401	Chd1l	98	63.886	ENSFHEG00000012420	chd1l	87	63.886	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025401	Chd1l	99	70.304	ENSGALG00000015038	CHD1L	98	70.416	Gallus_gallus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.229	ENSGAFG00000018198	chd1l	97	61.988	Gambusia_affinis
MGP_CAROLIEiJ_G0025401	Chd1l	59	65.966	ENSGACG00000014042	chd1l	98	66.342	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025401	Chd1l	95	75.294	ENSGAGG00000014432	CHD1L	96	75.294	Gopherus_agassizii
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.810	ENSGGOG00000001067	CHD1L	99	85.810	Gorilla_gorilla
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.760	ENSHBUG00000007464	chd1l	96	64.849	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025401	Chd1l	98	84.528	ENSHGLG00000008933	CHD1L	100	83.982	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025401	Chd1l	94	83.373	ENSHGLG00100007155	CHD1L	100	83.430	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025401	Chd1l	94	63.290	ENSHCOG00000012787	chd1l	92	63.290	Hippocampus_comes
MGP_CAROLIEiJ_G0025401	Chd1l	99	59.910	ENSIPUG00000022617	chd1l	87	59.910	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025401	Chd1l	100	76.106	ENSSTOG00000007032	CHD1L	100	76.881	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025401	Chd1l	99	63.524	ENSKMAG00000014358	chd1l	87	63.830	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025401	Chd1l	97	63.886	ENSLBEG00000023845	chd1l	98	62.840	Labrus_bergylta
MGP_CAROLIEiJ_G0025401	Chd1l	96	64.719	ENSLACG00000006262	CHD1L	86	64.447	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025401	Chd1l	95	70.706	ENSLOCG00000010574	chd1l	86	70.208	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025401	Chd1l	96	85.155	ENSLAFG00000018136	CHD1L	100	85.516	Loxodonta_africana
MGP_CAROLIEiJ_G0025401	Chd1l	94	87.204	ENSMFAG00000043562	CHD1L	100	87.711	Macaca_fascicularis
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.229	ENSMMUG00000009024	CHD1L	99	86.480	Macaca_mulatta
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.343	ENSMNEG00000039905	CHD1L	99	86.592	Macaca_nemestrina
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.571	ENSMLEG00000030900	CHD1L	99	86.816	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025401	Chd1l	98	63.086	ENSMAMG00000012822	chd1l	98	61.888	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.874	ENSMZEG00005020830	chd1l	88	64.874	Maylandia_zebra
MGP_CAROLIEiJ_G0025401	Chd1l	96	70.911	ENSMGAG00000014304	CHD1L	99	71.329	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.343	ENSMICG00000002497	CHD1L	99	86.577	Microcebus_murinus
MGP_CAROLIEiJ_G0025401	Chd1l	100	90.597	ENSMOCG00000006305	Chd1l	100	90.597	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025401	Chd1l	96	61.395	ENSMMOG00000005964	chd1l	90	61.369	Mola_mola
MGP_CAROLIEiJ_G0025401	Chd1l	99	78.251	ENSMODG00000018717	CHD1L	99	78.251	Monodelphis_domestica
MGP_CAROLIEiJ_G0025401	Chd1l	98	63.688	ENSMALG00000014675	chd1l	86	63.886	Monopterus_albus
MGP_CAROLIEiJ_G0025401	Chd1l	100	98.557	ENSMUSG00000028089	Chd1l	100	98.557	Mus_musculus
MGP_CAROLIEiJ_G0025401	Chd1l	100	96.089	MGP_PahariEiJ_G0026845	Chd1l	100	96.089	Mus_pahari
MGP_CAROLIEiJ_G0025401	Chd1l	100	98.446	MGP_SPRETEiJ_G0026347	Chd1l	100	98.446	Mus_spretus
MGP_CAROLIEiJ_G0025401	Chd1l	99	83.933	ENSMPUG00000000615	CHD1L	99	83.933	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025401	Chd1l	98	82.599	ENSMLUG00000007573	CHD1L	99	82.040	Myotis_lucifugus
MGP_CAROLIEiJ_G0025401	Chd1l	97	85.097	ENSNGAG00000000908	Chd1l	99	85.097	Nannospalax_galili
MGP_CAROLIEiJ_G0025401	Chd1l	97	62.514	ENSNBRG00000006021	chd1l	95	62.401	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.587	ENSNLEG00000000179	CHD1L	99	85.587	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025401	Chd1l	95	73.888	ENSOPRG00000006973	CHD1L	99	73.888	Ochotona_princeps
MGP_CAROLIEiJ_G0025401	Chd1l	100	80.288	ENSODEG00000002494	CHD1L	100	81.477	Octodon_degus
MGP_CAROLIEiJ_G0025401	Chd1l	98	65.143	ENSONIG00000003183	chd1l	89	65.143	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025401	Chd1l	86	71.907	ENSOANG00000003068	CHD1L	93	72.294	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025401	Chd1l	100	81.147	ENSOCUG00000009336	CHD1L	99	81.147	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025401	Chd1l	95	63.572	ENSORLG00000003673	chd1l	93	63.743	Oryzias_latipes
MGP_CAROLIEiJ_G0025401	Chd1l	97	63.006	ENSORLG00020005123	chd1l	94	64.478	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025401	Chd1l	98	62.543	ENSORLG00015001680	chd1l	99	62.783	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025401	Chd1l	85	57.143	ENSOMEG00000006109	chd1l	86	57.143	Oryzias_melastigma
MGP_CAROLIEiJ_G0025401	Chd1l	99	84.211	ENSOGAG00000008775	CHD1L	99	84.211	Otolemur_garnettii
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.410	ENSOARG00000020547	CHD1L	99	86.667	Ovis_aries
MGP_CAROLIEiJ_G0025401	Chd1l	99	84.270	ENSPPAG00000039193	CHD1L	100	87.575	Pan_paniscus
MGP_CAROLIEiJ_G0025401	Chd1l	98	85.324	ENSPPRG00000010258	CHD1L	99	84.564	Panthera_pardus
MGP_CAROLIEiJ_G0025401	Chd1l	98	86.887	ENSPTRG00000001220	CHD1L	99	86.242	Pan_troglodytes
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.571	ENSPANG00000009170	CHD1L	99	86.816	Papio_anubis
MGP_CAROLIEiJ_G0025401	Chd1l	99	64.454	ENSPKIG00000022166	chd1l	97	63.658	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025401	Chd1l	98	74.230	ENSPSIG00000012595	CHD1L	99	73.348	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025401	Chd1l	99	88.004	ENSPEMG00000013528	Chd1l	100	88.385	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025401	Chd1l	93	79.639	ENSPCIG00000030409	CHD1L	100	79.759	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.567	ENSPFOG00000015948	chd1l	86	64.567	Poecilia_formosa
MGP_CAROLIEiJ_G0025401	Chd1l	98	65.124	ENSPLAG00000015145	chd1l	96	64.409	Poecilia_latipinna
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.480	ENSPMEG00000008720	chd1l	91	64.819	Poecilia_mexicana
MGP_CAROLIEiJ_G0025401	Chd1l	96	63.406	ENSPREG00000017885	chd1l	97	63.291	Poecilia_reticulata
MGP_CAROLIEiJ_G0025401	Chd1l	98	87.130	ENSPPYG00000000946	CHD1L	99	86.465	Pongo_abelii
MGP_CAROLIEiJ_G0025401	Chd1l	99	73.430	ENSPCAG00000005959	CHD1L	99	74.103	Procavia_capensis
MGP_CAROLIEiJ_G0025401	Chd1l	95	79.505	ENSPVAG00000006084	CHD1L	100	79.505	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025401	Chd1l	98	63.914	ENSPNYG00000013001	chd1l	97	63.914	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.619	ENSPNAG00000011881	chd1l	86	65.017	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025401	Chd1l	100	93.157	ENSRNOG00000017669	Chd1l	100	93.488	Rattus_norvegicus
MGP_CAROLIEiJ_G0025401	Chd1l	99	85.251	ENSRBIG00000041272	CHD1L	99	85.251	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025401	Chd1l	97	85.649	ENSRROG00000041354	CHD1L	98	85.567	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025401	Chd1l	98	75.913	ENSSHAG00000017395	CHD1L	99	75.140	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.571	ENSSFOG00015003649	chd1l	97	64.452	Scleropages_formosus
MGP_CAROLIEiJ_G0025401	Chd1l	97	61.808	ENSSMAG00000019377	chd1l	94	61.170	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025401	Chd1l	95	64.277	ENSSDUG00000019831	chd1l	95	64.277	Seriola_dumerili
MGP_CAROLIEiJ_G0025401	Chd1l	96	63.953	ENSSLDG00000012714	chd1l	96	63.953	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025401	Chd1l	99	70.404	ENSSPUG00000016865	CHD1L	100	70.852	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.490	ENSSPAG00000017653	chd1l	92	64.908	Stegastes_partitus
MGP_CAROLIEiJ_G0025401	Chd1l	98	82.520	ENSSSCG00000006701	CHD1L	100	82.083	Sus_scrofa
MGP_CAROLIEiJ_G0025401	Chd1l	96	72.695	ENSTGUG00000013392	-	100	72.082	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025401	Chd1l	95	59.437	ENSTNIG00000004902	chd1l	99	59.203	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025401	Chd1l	96	82.771	ENSTTRG00000011711	CHD1L	100	82.771	Tursiops_truncatus
MGP_CAROLIEiJ_G0025401	Chd1l	99	84.193	ENSUAMG00000021991	CHD1L	99	84.305	Ursus_americanus
MGP_CAROLIEiJ_G0025401	Chd1l	99	83.969	ENSUMAG00000009733	CHD1L	99	83.969	Ursus_maritimus
MGP_CAROLIEiJ_G0025401	Chd1l	99	83.893	ENSVVUG00000007316	CHD1L	95	83.893	Vulpes_vulpes
MGP_CAROLIEiJ_G0025401	Chd1l	97	62.132	ENSXCOG00000008336	chd1l	86	62.401	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025401	Chd1l	98	64.859	ENSXMAG00000015898	chd1l	98	59.746	Xiphophorus_maculatus