EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025427 (Gene tree)
Gene ID: 110291558
Gene Symbol: Ttf2
Alias: 4632434F22Rik
Full Name: transcription termination factor 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 31801 bases
Position: chr3:95056033-95087833
Accession: 110291558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0059500	ResIII	PF04851.15	1e-09	1	1
MGP_CAROLIEiJ_P0059500	DEAD	PF00270.29	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0059504	-	1251	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059501	-	744	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059500	-	4560	XM_021158771	MGP_CAROLIEiJ_P0059500	1140 (aa)	XP_021014430	UPI000A31604A
MGP_CAROLIEiJ_T0059503	-	561	-	MGP_CAROLIEiJ_P0059503	186 (aa)	-	-
MGP_CAROLIEiJ_T0059502	-	4561	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0025427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.377	ENSG00000116830	TTF2	100	92.308	Homo_sapiens
MGP_CAROLIEiJ_G0025427	Ttf2	94	52.072	ENSAPLG00000010324	-	72	63.371	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.548	ENSANAG00000020654	TTF2	100	70.634	Aotus_nancymaae
MGP_CAROLIEiJ_G0025427	Ttf2	100	68.809	ENSBTAG00000015392	TTF2	100	68.638	Bos_taurus
MGP_CAROLIEiJ_G0025427	Ttf2	100	67.540	ENSCHIG00000020785	TTF2	98	67.287	Capra_hircus
MGP_CAROLIEiJ_G0025427	Ttf2	100	69.650	ENSCCAG00000032675	TTF2	100	70.120	Cebus_capucinus
MGP_CAROLIEiJ_G0025427	Ttf2	65	37.372	ENSCSAVG00000002857	-	100	37.372	Ciona_savignyi
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.830	ENSCANG00000032079	TTF2	100	70.744	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025427	Ttf2	100	64.480	ENSDORG00000013781	Ttf2	100	64.511	Dipodomys_ordii
MGP_CAROLIEiJ_G0025427	Ttf2	64	38.996	FBgn0002542	lds	70	38.867	Drosophila_melanogaster
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.060	ENSECAG00000012474	TTF2	100	77.222	Equus_caballus
MGP_CAROLIEiJ_G0025427	Ttf2	100	64.083	ENSFCAG00000001981	TTF2	100	64.696	Felis_catus
MGP_CAROLIEiJ_G0025427	Ttf2	85	46.774	ENSGALG00000015249	-	99	46.496	Gallus_gallus
MGP_CAROLIEiJ_G0025427	Ttf2	80	57.286	ENSGAFG00000004358	TTF2	72	57.500	Gambusia_affinis
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.462	ENSGGOG00000015790	TTF2	100	70.187	Gorilla_gorilla
MGP_CAROLIEiJ_G0025427	Ttf2	100	73.362	ENSJJAG00000015225	Ttf2	100	73.362	Jaculus_jaculus
MGP_CAROLIEiJ_G0025427	Ttf2	100	69.290	ENSMNEG00000042285	TTF2	100	69.119	Macaca_nemestrina
MGP_CAROLIEiJ_G0025427	Ttf2	100	71.001	ENSMLEG00000041549	TTF2	100	70.830	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025427	Ttf2	100	51.624	ENSMGAG00000014354	TTF2	100	51.374	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025427	Ttf2	99	80.637	ENSMOCG00000008415	Ttf2	99	80.725	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025427	Ttf2	100	58.568	ENSMODG00000005145	TTF2	98	57.926	Monodelphis_domestica
MGP_CAROLIEiJ_G0025427	Ttf2	78	57.992	ENSMALG00000017262	TTF2	85	58.520	Monopterus_albus
MGP_CAROLIEiJ_G0025427	Ttf2	100	97.105	ENSMUSG00000033222	Ttf2	100	97.105	Mus_musculus
MGP_CAROLIEiJ_G0025427	Ttf2	100	93.299	MGP_PahariEiJ_G0026871	Ttf2	100	93.299	Mus_pahari
MGP_CAROLIEiJ_G0025427	Ttf2	100	96.842	MGP_SPRETEiJ_G0026377	Ttf2	100	96.842	Mus_spretus
MGP_CAROLIEiJ_G0025427	Ttf2	100	69.547	ENSMLUG00000013908	TTF2	100	69.376	Myotis_lucifugus
MGP_CAROLIEiJ_G0025427	Ttf2	100	76.620	ENSNGAG00000018882	Ttf2	100	76.357	Nannospalax_galili
MGP_CAROLIEiJ_G0025427	Ttf2	62	56.923	ENSNBRG00000011914	TTF2	63	57.483	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025427	Ttf2	100	71.147	ENSNLEG00000005209	TTF2	100	71.098	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.103	ENSOCUG00000000613	TTF2	100	70.103	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025427	Ttf2	100	68.664	ENSOGAG00000009039	TTF2	100	68.782	Otolemur_garnettii
MGP_CAROLIEiJ_G0025427	Ttf2	100	67.434	ENSOARG00000020266	TTF2	100	67.178	Ovis_aries
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.351	ENSPPAG00000027542	TTF2	100	70.077	Pan_paniscus
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.437	ENSPTRG00000001162	TTF2	100	70.162	Pan_troglodytes
MGP_CAROLIEiJ_G0025427	Ttf2	66	64.368	ENSPSIG00000005266	TTF2	98	64.368	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025427	Ttf2	85	55.224	ENSPCIG00000003483	TTF2	90	55.124	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025427	Ttf2	100	68.065	ENSPPYG00000000976	TTF2	100	67.802	Pongo_abelii
MGP_CAROLIEiJ_G0025427	Ttf2	100	69.666	ENSPCOG00000000551	TTF2	100	69.666	Propithecus_coquereli
MGP_CAROLIEiJ_G0025427	Ttf2	100	67.329	ENSPVAG00000014881	TTF2	100	67.329	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.468	ENSRBIG00000042651	TTF2	100	70.298	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.805	ENSRROG00000013287	TTF2	100	70.634	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025427	Ttf2	100	70.094	ENSSBOG00000022555	TTF2	100	69.923	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025427	Ttf2	100	59.161	ENSSHAG00000018195	TTF2	100	59.060	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025427	Ttf2	67	58.816	ENSSMAG00000007532	TTF2	100	49.284	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025427	Ttf2	80	56.980	ENSSDUG00000013617	TTF2	69	58.110	Seriola_dumerili
MGP_CAROLIEiJ_G0025427	Ttf2	100	59.534	ENSSARG00000007562	TTF2	100	59.501	Sorex_araneus
MGP_CAROLIEiJ_G0025427	Ttf2	100	69.001	ENSSSCG00000006733	TTF2	100	69.001	Sus_scrofa
MGP_CAROLIEiJ_G0025427	Ttf2	72	53.934	ENSTRUG00000015592	-	77	53.934	Takifugu_rubripes
MGP_CAROLIEiJ_G0025427	Ttf2	67	57.269	ENSTNIG00000015679	-	70	57.755	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025427	Ttf2	100	65.638	ENSTTRG00000012884	TTF2	100	65.467	Tursiops_truncatus
MGP_CAROLIEiJ_G0025427	Ttf2	91	59.756	ENSVPAG00000008276	TTF2	97	59.944	Vicugna_pacos
MGP_CAROLIEiJ_G0025427	Ttf2	74	44.469	ENSXETG00000022003	-	100	44.295	Xenopus_tropicalis