EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025474 (Gene tree)
Gene ID: 110291617
Gene Symbol: Ddx20
Alias: GEMIN3|dp103
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 8908 bases
Position: chr3:99705883-99714790
Accession: 110291617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0059739	ResIII	PF04851.15	3.2e-06	1	1
MGP_CAROLIEiJ_P0059739	DEAD	PF00270.29	5.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0059741	-	2009	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0059740	-	1264	-	MGP_CAROLIEiJ_P0059740	139 (aa)	-	-
MGP_CAROLIEiJ_T0059739	-	2905	XM_021158845	MGP_CAROLIEiJ_P0059739	825 (aa)	XP_021014504	UPI000A31A99C

Gene Model

Click here to download MGP_CAROLIEiJ_G0025474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025474	Ddx20	50	31.894	MGP_CAROLIEiJ_G0032122	Ddx6	79	32.487
MGP_CAROLIEiJ_G0025474	Ddx20	50	34.140	MGP_CAROLIEiJ_G0031277	Ddx39	89	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.495	ENSG00000064703	DDX20	99	83.558	Homo_sapiens
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.656	ENSAPOG00000017383	DDX20	71	61.248	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025474	Ddx20	98	83.395	ENSAMEG00000005344	DDX20	99	83.313	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025474	Ddx20	72	62.144	ENSACIG00000013095	ddx20	71	62.144	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.713	ENSAOCG00000013474	DDX20	71	61.248	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.536	ENSAPEG00000006690	ddx20	71	61.248	Amphiprion_percula
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.477	ENSATEG00000002941	ddx20	72	61.779	Anabas_testudineus
MGP_CAROLIEiJ_G0025474	Ddx20	89	49.799	ENSAPLG00000013826	DDX20	99	49.531	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025474	Ddx20	93	59.132	ENSACAG00000006235	DDX20	98	58.876	Anolis_carolinensis
MGP_CAROLIEiJ_G0025474	Ddx20	98	83.395	ENSANAG00000037881	DDX20	99	83.313	Aotus_nancymaae
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.660	ENSACLG00000009485	ddx20	99	50.662	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025474	Ddx20	77	58.399	ENSAMXG00000040738	ddx20	81	60.099	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.476	ENSBTAG00000018717	DDX20	99	83.476	Bos_taurus
MGP_CAROLIEiJ_G0025474	Ddx20	98	82.411	ENSCJAG00000013428	DDX20	95	80.736	Callithrix_jacchus
MGP_CAROLIEiJ_G0025474	Ddx20	98	83.002	ENSCAFG00000013674	DDX20	100	82.810	Canis_familiaris
MGP_CAROLIEiJ_G0025474	Ddx20	99	82.339	ENSCAFG00020008055	DDX20	94	92.357	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.172	ENSCHIG00000011219	DDX20	99	84.088	Capra_hircus
MGP_CAROLIEiJ_G0025474	Ddx20	97	84.720	ENSTSYG00000000153	DDX20	97	84.739	Carlito_syrichta
MGP_CAROLIEiJ_G0025474	Ddx20	84	76.912	ENSCAPG00000017427	DDX20	100	76.912	Cavia_aperea
MGP_CAROLIEiJ_G0025474	Ddx20	99	80.704	ENSCPOG00000032340	DDX20	98	81.381	Cavia_porcellus
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.617	ENSCCAG00000026759	DDX20	99	83.558	Cebus_capucinus
MGP_CAROLIEiJ_G0025474	Ddx20	99	82.909	ENSCATG00000039030	DDX20	98	83.600	Cercocebus_atys
MGP_CAROLIEiJ_G0025474	Ddx20	99	81.091	ENSCLAG00000008874	DDX20	98	81.773	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.030	ENSCSAG00000001582	DDX20	98	83.724	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025474	Ddx20	63	86.527	ENSCHOG00000002610	DDX20	77	86.527	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025474	Ddx20	94	63.232	ENSCPBG00000021256	DDX20	99	62.315	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.152	ENSCANG00000041894	DDX20	98	83.724	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025474	Ddx20	99	92.525	ENSCGRG00001014132	Ddx20	99	92.525	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025474	Ddx20	87	91.389	ENSCGRG00000002300	Ddx20	100	91.389	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025474	Ddx20	68	55.218	ENSCSEG00000018265	DDX20	69	55.218	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.183	ENSCVAG00000014821	ddx20	99	50.860	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025474	Ddx20	70	62.287	ENSDARG00000061204	ddx20	96	50.852	Danio_rerio
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.804	ENSDNOG00000030865	DDX20	99	83.804	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025474	Ddx20	98	85.468	ENSDORG00000011660	Ddx20	99	85.504	Dipodomys_ordii
MGP_CAROLIEiJ_G0025474	Ddx20	66	95.506	ENSETEG00000002726	DDX20	65	93.407	Echinops_telfairi
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.379	ENSEASG00005005454	DDX20	99	84.294	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.502	ENSECAG00000013565	DDX20	99	84.417	Equus_caballus
MGP_CAROLIEiJ_G0025474	Ddx20	95	49.031	ENSELUG00000010260	ddx20	69	59.520	Esox_lucius
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.379	ENSFCAG00000025736	DDX20	99	84.294	Felis_catus
MGP_CAROLIEiJ_G0025474	Ddx20	87	57.279	ENSFALG00000000666	DDX20	99	57.514	Ficedula_albicollis
MGP_CAROLIEiJ_G0025474	Ddx20	99	76.896	ENSFDAG00000001140	DDX20	98	77.160	Fukomys_damarensis
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.088	ENSFHEG00000019742	ddx20	99	51.429	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025474	Ddx20	93	60.976	ENSGALG00000001504	DDX20	99	60.385	Gallus_gallus
MGP_CAROLIEiJ_G0025474	Ddx20	95	53.234	ENSGAFG00000006427	ddx20	99	53.109	Gambusia_affinis
MGP_CAROLIEiJ_G0025474	Ddx20	94	64.249	ENSGAGG00000000130	DDX20	99	64.249	Gopherus_agassizii
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.495	ENSGGOG00000015576	DDX20	99	83.558	Gorilla_gorilla
MGP_CAROLIEiJ_G0025474	Ddx20	73	60.877	ENSHBUG00000007853	ddx20	73	60.778	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025474	Ddx20	99	81.432	ENSHGLG00000014848	DDX20	98	81.650	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025474	Ddx20	99	81.432	ENSHGLG00100003740	DDX20	98	81.650	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.166	ENSHCOG00000001915	ddx20	73	61.318	Hippocampus_comes
MGP_CAROLIEiJ_G0025474	Ddx20	70	61.538	ENSIPUG00000004876	ddx20	69	61.525	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.625	ENSSTOG00000029089	DDX20	99	84.417	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025474	Ddx20	99	85.437	ENSJJAG00000011198	Ddx20	99	85.399	Jaculus_jaculus
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.852	ENSKMAG00000019022	ddx20	99	50.973	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.220	ENSLBEG00000019194	ddx20	97	50.672	Labrus_bergylta
MGP_CAROLIEiJ_G0025474	Ddx20	95	55.379	ENSLACG00000018491	DDX20	99	57.019	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025474	Ddx20	95	54.412	ENSLOCG00000010372	ddx20	73	64.865	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025474	Ddx20	98	79.926	ENSLAFG00000014646	DDX20	100	79.607	Loxodonta_africana
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.273	ENSMFAG00000031755	DDX20	98	83.847	Macaca_fascicularis
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.273	ENSMNEG00000005757	DDX20	98	83.847	Macaca_nemestrina
MGP_CAROLIEiJ_G0025474	Ddx20	99	82.909	ENSMLEG00000005722	DDX20	98	83.600	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.662	ENSMAMG00000009654	ddx20	73	60.784	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.481	ENSMZEG00005027081	ddx20	99	50.662	Maylandia_zebra
MGP_CAROLIEiJ_G0025474	Ddx20	92	60.286	ENSMGAG00000004624	DDX20	99	60.026	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025474	Ddx20	99	91.054	ENSMAUG00000010659	Ddx20	99	91.054	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025474	Ddx20	99	84.830	ENSMICG00000011509	DDX20	99	84.785	Microcebus_murinus
MGP_CAROLIEiJ_G0025474	Ddx20	99	89.461	ENSMOCG00000012954	Ddx20	99	89.461	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.125	ENSMMOG00000013103	ddx20	99	50.993	Mola_mola
MGP_CAROLIEiJ_G0025474	Ddx20	95	74.936	ENSMODG00000001311	DDX20	94	74.968	Monodelphis_domestica
MGP_CAROLIEiJ_G0025474	Ddx20	100	97.939	ENSMUSG00000027905	Ddx20	100	97.939	Mus_musculus
MGP_CAROLIEiJ_G0025474	Ddx20	99	96.723	MGP_PahariEiJ_G0026919	Ddx20	99	96.723	Mus_pahari
MGP_CAROLIEiJ_G0025474	Ddx20	100	98.061	MGP_SPRETEiJ_G0026423	Ddx20	100	98.061	Mus_spretus
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.010	ENSMPUG00000004921	DDX20	99	83.926	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025474	Ddx20	84	80.231	ENSMLUG00000009676	DDX20	100	80.231	Myotis_lucifugus
MGP_CAROLIEiJ_G0025474	Ddx20	99	86.165	ENSNGAG00000022953	Ddx20	99	86.135	Nannospalax_galili
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.338	ENSNBRG00000020244	ddx20	70	62.098	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025474	Ddx20	99	84.223	ENSNLEG00000004040	DDX20	99	84.172	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025474	Ddx20	62	76.289	ENSMEUG00000013459	-	63	76.289	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025474	Ddx20	67	90.698	ENSOPRG00000004035	DDX20	84	90.057	Ochotona_princeps
MGP_CAROLIEiJ_G0025474	Ddx20	72	61.564	ENSONIG00000012436	ddx20	99	53.540	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025474	Ddx20	71	74.194	ENSOANG00000003318	DDX20	91	74.030	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025474	Ddx20	99	82.382	ENSOCUG00000025939	DDX20	99	83.436	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.125	ENSORLG00000008949	ddx20	99	50.873	Oryzias_latipes
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.741	ENSORLG00020003852	ddx20	99	51.759	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.250	ENSORLG00015020167	ddx20	99	52.010	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.496	ENSOMEG00000013657	ddx20	99	51.935	Oryzias_melastigma
MGP_CAROLIEiJ_G0025474	Ddx20	99	84.867	ENSOGAG00000010503	DDX20	99	85.067	Otolemur_garnettii
MGP_CAROLIEiJ_G0025474	Ddx20	98	84.211	ENSOARG00000019651	DDX20	99	84.127	Ovis_aries
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.252	ENSPPAG00000031680	DDX20	99	83.313	Pan_paniscus
MGP_CAROLIEiJ_G0025474	Ddx20	99	84.417	ENSPPRG00000022979	DDX20	99	84.417	Panthera_pardus
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.252	ENSPTRG00000001105	DDX20	99	83.313	Pan_troglodytes
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.030	ENSPANG00000017985	DDX20	98	83.724	Papio_anubis
MGP_CAROLIEiJ_G0025474	Ddx20	92	52.666	ENSPKIG00000020161	ddx20	99	52.474	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025474	Ddx20	88	60.627	ENSPSIG00000003636	DDX20	100	60.899	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.856	ENSPMGG00000005966	ddx20	99	51.485	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025474	Ddx20	99	92.270	ENSPEMG00000019595	Ddx20	99	92.270	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025474	Ddx20	99	72.068	ENSPCIG00000027721	DDX20	99	72.850	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.978	ENSPFOG00000010540	ddx20	99	52.854	Poecilia_formosa
MGP_CAROLIEiJ_G0025474	Ddx20	95	53.086	ENSPLAG00000009925	ddx20	99	52.963	Poecilia_latipinna
MGP_CAROLIEiJ_G0025474	Ddx20	95	53.425	ENSPMEG00000005998	ddx20	99	53.300	Poecilia_mexicana
MGP_CAROLIEiJ_G0025474	Ddx20	95	53.258	ENSPREG00000018837	ddx20	99	53.133	Poecilia_reticulata
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.981	ENSPPYG00000001026	DDX20	99	83.926	Pongo_abelii
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.859	ENSPCOG00000025185	DDX20	99	83.926	Propithecus_coquereli
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.495	ENSPVAG00000004664	DDX20	99	83.436	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.542	ENSPNYG00000014433	ddx20	99	50.903	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025474	Ddx20	72	59.536	ENSPNAG00000018148	ddx20	73	59.772	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025474	Ddx20	99	93.925	ENSRNOG00000015274	Ddx20	99	94.219	Rattus_norvegicus
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.030	ENSRBIG00000030629	DDX20	98	83.600	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.030	ENSRROG00000030608	DDX20	98	83.600	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025474	Ddx20	99	83.981	ENSSBOG00000024789	DDX20	99	83.926	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025474	Ddx20	84	72.270	ENSSHAG00000014518	DDX20	99	72.270	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.184	ENSSFOG00015008354	ddx20	72	63.043	Scleropages_formosus
MGP_CAROLIEiJ_G0025474	Ddx20	76	61.054	ENSSMAG00000007498	ddx20	74	61.897	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.736	ENSSDUG00000015980	ddx20	99	52.861	Seriola_dumerili
MGP_CAROLIEiJ_G0025474	Ddx20	74	60.294	ENSSLDG00000000437	ddx20	67	60.626	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025474	Ddx20	88	70.856	ENSSARG00000013569	DDX20	88	70.856	Sorex_araneus
MGP_CAROLIEiJ_G0025474	Ddx20	98	83.292	ENSSSCG00000006783	DDX20	98	83.292	Sus_scrofa
MGP_CAROLIEiJ_G0025474	Ddx20	77	66.354	ENSTGUG00000013660	DDX20	85	69.454	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025474	Ddx20	70	60.342	ENSTRUG00000023712	ddx20	71	60.342	Takifugu_rubripes
MGP_CAROLIEiJ_G0025474	Ddx20	95	50.181	ENSTNIG00000019425	ddx20	99	49.698	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025474	Ddx20	84	85.027	ENSTTRG00000005131	DDX20	83	85.955	Tursiops_truncatus
MGP_CAROLIEiJ_G0025474	Ddx20	98	80.812	ENSUAMG00000018924	DDX20	99	81.963	Ursus_americanus
MGP_CAROLIEiJ_G0025474	Ddx20	88	83.196	ENSUMAG00000013897	DDX20	92	83.196	Ursus_maritimus
MGP_CAROLIEiJ_G0025474	Ddx20	98	82.945	ENSVPAG00000010031	DDX20	99	82.864	Vicugna_pacos
MGP_CAROLIEiJ_G0025474	Ddx20	99	82.989	ENSVVUG00000016236	DDX20	99	82.924	Vulpes_vulpes
MGP_CAROLIEiJ_G0025474	Ddx20	94	56.890	ENSXETG00000013568	ddx20	100	56.527	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025474	Ddx20	95	51.985	ENSXCOG00000007952	ddx20	98	51.925	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025474	Ddx20	95	52.114	ENSXMAG00000007573	ddx20	99	52.055	Xiphophorus_maculatus