EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0025555 (Gene tree)
Gene ID
110290915
Gene Symbol
Rnpc3
Alias
2810441O16Rik|C030014B17Rik
Full Name
RNA binding region (RNP1%2C RRM) containing 3
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
21806 bases
Position
chr3:107492812-107514617
Accession
110290915
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0060078RRM_1PF00076.223.9e-1812
MGP_CAROLIEiJ_P0060078RRM_1PF00076.223.9e-1822
MGP_CAROLIEiJ_P0060077RRM_1PF00076.224.1e-1812
MGP_CAROLIEiJ_P0060077RRM_1PF00076.224.1e-1822
MGP_CAROLIEiJ_P0060075RRM_1PF00076.224.1e-1812
MGP_CAROLIEiJ_P0060075RRM_1PF00076.224.1e-1822
MGP_CAROLIEiJ_P0060076RRM_1PF00076.224.1e-1812
MGP_CAROLIEiJ_P0060076RRM_1PF00076.224.1e-1822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0060075-3871-MGP_CAROLIEiJ_P0060075512 (aa)XP_021013475UPI000A314E74
MGP_CAROLIEiJ_T0060077-2604-MGP_CAROLIEiJ_P0060077511 (aa)XP_021013477UPI000A319DFE
MGP_CAROLIEiJ_T0060076-1824-MGP_CAROLIEiJ_P0060076512 (aa)XP_021013475UPI000A314E74
MGP_CAROLIEiJ_T0060079-411--- (aa)--
MGP_CAROLIEiJ_T0060080-667--- (aa)--
MGP_CAROLIEiJ_T0060078-1518-MGP_CAROLIEiJ_P0060078505 (aa)--
MGP_CAROLIEiJ_T0060081-423--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0025555's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025555's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0025555Rnpc310088.780ENSG00000185946RNPC310092.029Homo_sapiens
MGP_CAROLIEiJ_G0025555Rnpc39656.389ENSAPOG00000017371rnpc39756.389Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025555Rnpc39988.386ENSAMEG00000001694RNPC39987.669Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025555Rnpc39653.320ENSACIG00000021043rnpc39753.320Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025555Rnpc39656.225ENSAOCG00000014052rnpc39556.225Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025555Rnpc39656.024ENSAPEG00000008739rnpc39556.024Amphiprion_percula
MGP_CAROLIEiJ_G0025555Rnpc39655.000ENSATEG00000021263rnpc39755.000Anabas_testudineus
MGP_CAROLIEiJ_G0025555Rnpc38968.433ENSAPLG00000015605RNPC39968.433Anas_platyrhynchos
MGP_CAROLIEiJ_G0025555Rnpc39668.016ENSACAG00000002029RNPC39667.800Anolis_carolinensis
MGP_CAROLIEiJ_G0025555Rnpc310087.791ENSANAG00000019950RNPC39987.791Aotus_nancymaae
MGP_CAROLIEiJ_G0025555Rnpc39654.990ENSACLG00000014702rnpc39654.990Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025555Rnpc39658.248ENSAMXG00000033372rnpc39658.248Astyanax_mexicanus
MGP_CAROLIEiJ_G0025555Rnpc310089.764ENSBTAG00000019091RNPC39989.515Bos_taurus
MGP_CAROLIEiJ_G0025555Rnpc310083.140ENSCJAG00000035686RNPC39983.527Callithrix_jacchus
MGP_CAROLIEiJ_G0025555Rnpc310087.427ENSCAFG00000019972RNPC39987.427Canis_familiaris
MGP_CAROLIEiJ_G0025555Rnpc310087.621ENSCAFG00020011300RNPC39987.621Canis_lupus_dingo
MGP_CAROLIEiJ_G0025555Rnpc310089.391ENSCHIG00000020361RNPC39989.147Capra_hircus
MGP_CAROLIEiJ_G0025555Rnpc310085.827ENSTSYG00000030256RNPC39985.825Carlito_syrichta
MGP_CAROLIEiJ_G0025555Rnpc38575.286ENSCAPG00000013600RNPC39874.478Cavia_aperea
MGP_CAROLIEiJ_G0025555Rnpc310087.426ENSCPOG00000031638RNPC39986.822Cavia_porcellus
MGP_CAROLIEiJ_G0025555Rnpc310087.984ENSCCAG00000024301RNPC39987.984Cebus_capucinus
MGP_CAROLIEiJ_G0025555Rnpc39967.723ENSCATG00000035930-9867.129Cercocebus_atys
MGP_CAROLIEiJ_G0025555Rnpc39988.189ENSCATG00000002086RNPC39987.961Cercocebus_atys
MGP_CAROLIEiJ_G0025555Rnpc310086.417ENSCLAG00000005169RNPC39986.796Chinchilla_lanigera
MGP_CAROLIEiJ_G0025555Rnpc39987.992ENSCSAG00000001519RNPC39987.767Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025555Rnpc39969.034ENSCPBG00000028311RNPC39967.437Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025555Rnpc39637.747ENSCING00000021276-10038.048Ciona_intestinalis
MGP_CAROLIEiJ_G0025555Rnpc39987.992ENSCANG00000031444RNPC39987.767Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025555Rnpc310093.504ENSCGRG00001019276Rnpc310093.204Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025555Rnpc38993.348ENSCGRG00000000053Rnpc310093.348Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025555Rnpc39655.102ENSCSEG00000013475rnpc39655.102Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025555Rnpc39655.090ENSCVAG00000002645rnpc39754.762Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025555Rnpc39657.258ENSDARG00000011247rnpc39363.006Danio_rerio
MGP_CAROLIEiJ_G0025555Rnpc310086.220ENSDNOG00000047498-9985.825Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025555Rnpc310086.220ENSDNOG00000044555-9985.825Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025555Rnpc310087.033ENSDORG00000027343Rnpc39987.016Dipodomys_ordii
MGP_CAROLIEiJ_G0025555Rnpc39647.826ENSEBUG00000002068rnpc39748.509Eptatretus_burgeri
MGP_CAROLIEiJ_G0025555Rnpc310087.403ENSEASG00005015957RNPC39987.403Equus_asinus_asinus
MGP_CAROLIEiJ_G0025555Rnpc310087.403ENSECAG00000021148RNPC39987.403Equus_caballus
MGP_CAROLIEiJ_G0025555Rnpc39754.492ENSELUG00000002264rnpc39753.065Esox_lucius
MGP_CAROLIEiJ_G0025555Rnpc310087.791ENSFCAG00000024312RNPC39987.791Felis_catus
MGP_CAROLIEiJ_G0025555Rnpc38970.861ENSFALG00000002580RNPC39970.673Ficedula_albicollis
MGP_CAROLIEiJ_G0025555Rnpc310088.016ENSFDAG00000019948RNPC310087.791Fukomys_damarensis
MGP_CAROLIEiJ_G0025555Rnpc39750.707ENSFHEG00000020647rnpc39850.000Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025555Rnpc39654.970ENSGMOG00000019213rnpc39553.893Gadus_morhua
MGP_CAROLIEiJ_G0025555Rnpc39968.911ENSGALG00000005162RNPC38969.231Gallus_gallus
MGP_CAROLIEiJ_G0025555Rnpc39654.032ENSGAFG00000017236rnpc39654.200Gambusia_affinis
MGP_CAROLIEiJ_G0025555Rnpc39655.397ENSGACG00000002048rnpc39655.289Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025555Rnpc39770.161ENSGAGG00000008438RNPC39668.442Gopherus_agassizii
MGP_CAROLIEiJ_G0025555Rnpc39974.155ENSGGOG00000026201-9973.477Gorilla_gorilla
MGP_CAROLIEiJ_G0025555Rnpc38078.947ENSHBUG00000015966rnpc38278.947Haplochromis_burtoni
MGP_CAROLIEiJ_G0025555Rnpc310087.230ENSHGLG00000001708RNPC39987.016Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025555Rnpc310087.230ENSHGLG00100003005RNPC39987.016Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025555Rnpc39755.040ENSHCOG00000017135rnpc39755.332Hippocampus_comes
MGP_CAROLIEiJ_G0025555Rnpc39656.389ENSIPUG00000002916rnpc39756.389Ictalurus_punctatus
MGP_CAROLIEiJ_G0025555Rnpc310087.623ENSSTOG00000025020RNPC39987.209Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025555Rnpc310085.078ENSJJAG00000010203Rnpc310086.240Jaculus_jaculus
MGP_CAROLIEiJ_G0025555Rnpc39654.970ENSKMAG00000017358rnpc39752.789Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025555Rnpc39655.758ENSLBEG00000024901rnpc39555.758Labrus_bergylta
MGP_CAROLIEiJ_G0025555Rnpc39662.525ENSLACG00000005720RNPC39062.272Latimeria_chalumnae
MGP_CAROLIEiJ_G0025555Rnpc39661.100ENSLOCG00000007986rnpc39660.692Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025555Rnpc310086.628ENSLAFG00000032342RNPC310086.628Loxodonta_africana
MGP_CAROLIEiJ_G0025555Rnpc39987.992ENSMFAG00000002004RNPC39987.767Macaca_fascicularis
MGP_CAROLIEiJ_G0025555Rnpc39965.209ENSMFAG00000002917-9965.887Macaca_fascicularis
MGP_CAROLIEiJ_G0025555Rnpc39987.992ENSMMUG00000018039RNPC39987.767Macaca_mulatta
MGP_CAROLIEiJ_G0025555Rnpc38580.282ENSMMUG00000002098-9477.928Macaca_mulatta
MGP_CAROLIEiJ_G0025555Rnpc39983.071ENSMNEG00000033950RNPC39982.913Macaca_nemestrina
MGP_CAROLIEiJ_G0025555Rnpc37868.861ENSMNEG00000029209-9863.960Macaca_nemestrina
MGP_CAROLIEiJ_G0025555Rnpc39988.189ENSMLEG00000033628RNPC39987.961Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025555Rnpc39966.667ENSMLEG00000034644-9866.275Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025555Rnpc39651.297ENSMAMG00000007496rnpc39748.544Mastacembelus_armatus
MGP_CAROLIEiJ_G0025555Rnpc39654.382ENSMZEG00005020233rnpc39754.382Maylandia_zebra
MGP_CAROLIEiJ_G0025555Rnpc38967.826ENSMGAG00000006381RNPC39967.679Meleagris_gallopavo
MGP_CAROLIEiJ_G0025555Rnpc39894.578ENSMAUG00000001358Rnpc310093.981Mesocricetus_auratus
MGP_CAROLIEiJ_G0025555Rnpc310088.998ENSMICG00000029591RNPC39988.760Microcebus_murinus
MGP_CAROLIEiJ_G0025555Rnpc39892.786ENSMOCG00000013423Rnpc310092.263Microtus_ochrogaster
MGP_CAROLIEiJ_G0025555Rnpc39652.245ENSMMOG00000005309rnpc39751.000Mola_mola
MGP_CAROLIEiJ_G0025555Rnpc310076.969ENSMODG00000002946RNPC39976.969Monodelphis_domestica
MGP_CAROLIEiJ_G0025555Rnpc39653.119ENSMALG00000015471rnpc39752.918Monopterus_albus
MGP_CAROLIEiJ_G0025555Rnpc310098.833ENSMUSG00000027981Rnpc310098.833Mus_musculus
MGP_CAROLIEiJ_G0025555Rnpc310097.860MGP_PahariEiJ_G0027001Rnpc310097.860Mus_pahari
MGP_CAROLIEiJ_G0025555Rnpc310098.638MGP_SPRETEiJ_G0026505Rnpc310098.638Mus_spretus
MGP_CAROLIEiJ_G0025555Rnpc310087.403ENSMPUG00000007349RNPC39987.403Mustela_putorius_furo
MGP_CAROLIEiJ_G0025555Rnpc310085.658ENSMLUG00000028743RNPC39985.465Myotis_lucifugus
MGP_CAROLIEiJ_G0025555Rnpc310090.373ENSNGAG00000010939Rnpc39990.430Nannospalax_galili
MGP_CAROLIEiJ_G0025555Rnpc39654.786ENSNBRG00000012196rnpc39354.786Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025555Rnpc310088.583ENSNLEG00000012013RNPC39988.350Nomascus_leucogenys
MGP_CAROLIEiJ_G0025555Rnpc310084.466ENSODEG00000007612RNPC39984.466Octodon_degus
MGP_CAROLIEiJ_G0025555Rnpc39655.397ENSONIG00000004770rnpc39955.601Oreochromis_niloticus
MGP_CAROLIEiJ_G0025555Rnpc39174.624ENSOANG00000008220RNPC39974.839Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025555Rnpc310087.403ENSOCUG00000004016RNPC39987.403Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025555Rnpc39752.929ENSORLG00000005694rnpc39754.234Oryzias_latipes
MGP_CAROLIEiJ_G0025555Rnpc39753.521ENSORLG00020005513rnpc39754.819Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025555Rnpc39753.119ENSORLG00015002179rnpc39754.839Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025555Rnpc39753.955ENSOMEG00000017737rnpc39755.466Oryzias_melastigma
MGP_CAROLIEiJ_G0025555Rnpc310087.791ENSOGAG00000026182RNPC39987.791Otolemur_garnettii
MGP_CAROLIEiJ_G0025555Rnpc310089.194ENSOARG00000018719RNPC39988.953Ovis_aries
MGP_CAROLIEiJ_G0025555Rnpc310088.235ENSPPAG00000037459RNPC39988.008Pan_paniscus
MGP_CAROLIEiJ_G0025555Rnpc39974.354ENSPPAG00000030278-9974.755Pan_paniscus
MGP_CAROLIEiJ_G0025555Rnpc310087.403ENSPPRG00000020246RNPC39987.403Panthera_pardus
MGP_CAROLIEiJ_G0025555Rnpc39987.945ENSPTIG00000009887RNPC39987.945Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025555Rnpc310088.409ENSPTRG00000033902RNPC39988.178Pan_troglodytes
MGP_CAROLIEiJ_G0025555Rnpc39974.008ENSPTRG00000044227-9874.008Pan_troglodytes
MGP_CAROLIEiJ_G0025555Rnpc39969.822ENSPANG00000029957-9969.428Papio_anubis
MGP_CAROLIEiJ_G0025555Rnpc39988.363ENSPANG00000012137RNPC39988.132Papio_anubis
MGP_CAROLIEiJ_G0025555Rnpc39652.590ENSPKIG00000008828rnpc39550.394Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025555Rnpc36467.879ENSPSIG00000007396RNPC39966.364Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025555Rnpc39552.156ENSPMGG00000011742rnpc39551.646Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025555Rnpc39092.105ENSPEMG00000020112Rnpc310092.905Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025555Rnpc39844.925ENSPMAG00000003778rnpc39844.569Petromyzon_marinus
MGP_CAROLIEiJ_G0025555Rnpc310077.756ENSPCIG00000004415-9977.756Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025555Rnpc39654.032ENSPFOG00000009895rnpc39754.032Poecilia_formosa
MGP_CAROLIEiJ_G0025555Rnpc39654.032ENSPLAG00000012023rnpc39754.032Poecilia_latipinna
MGP_CAROLIEiJ_G0025555Rnpc39654.234ENSPMEG00000003663rnpc39754.234Poecilia_mexicana
MGP_CAROLIEiJ_G0025555Rnpc39753.175ENSPREG00000010206rnpc39753.924Poecilia_reticulata
MGP_CAROLIEiJ_G0025555Rnpc38484.309ENSPPYG00000001102RNPC39984.101Pongo_abelii
MGP_CAROLIEiJ_G0025555Rnpc39654.786ENSPNYG00000020603rnpc39654.786Pundamilia_nyererei
MGP_CAROLIEiJ_G0025555Rnpc310094.685ENSRNOG00000017310Rnpc310094.369Rattus_norvegicus
MGP_CAROLIEiJ_G0025555Rnpc39982.908ENSRBIG00000043897RNPC39982.752Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025555Rnpc39988.583ENSRROG00000032334RNPC39988.350Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025555Rnpc310088.155ENSSBOG00000024473RNPC39889.928Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025555Rnpc310076.969ENSSHAG00000011859RNPC39976.969Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025555Rnpc39759.073ENSSFOG00015013055rnpc39955.490Scleropages_formosus
MGP_CAROLIEiJ_G0025555Rnpc39652.390ENSSMAG00000020346rnpc39751.644Scophthalmus_maximus
MGP_CAROLIEiJ_G0025555Rnpc39654.509ENSSDUG00000006600rnpc39654.509Seriola_dumerili
MGP_CAROLIEiJ_G0025555Rnpc39654.509ENSSLDG00000007979rnpc39654.509Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025555Rnpc39864.329ENSSPUG00000003872-9364.529Sphenodon_punctatus
MGP_CAROLIEiJ_G0025555Rnpc39669.168ENSSPUG00000008539-9867.568Sphenodon_punctatus
MGP_CAROLIEiJ_G0025555Rnpc39655.984ENSSPAG00000005633rnpc39756.592Stegastes_partitus
MGP_CAROLIEiJ_G0025555Rnpc310088.583ENSSSCG00000037254RNPC39988.932Sus_scrofa
MGP_CAROLIEiJ_G0025555Rnpc38970.705ENSTGUG00000004795-9970.705Taeniopygia_guttata
MGP_CAROLIEiJ_G0025555Rnpc39654.691ENSTNIG00000018963rnpc39754.691Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025555Rnpc39988.955ENSUMAG00000007775RNPC39988.955Ursus_maritimus
MGP_CAROLIEiJ_G0025555Rnpc310087.621ENSVVUG00000000331RNPC39987.621Vulpes_vulpes
MGP_CAROLIEiJ_G0025555Rnpc310048.479ENSXETG00000025027rnpc39948.633Xenopus_tropicalis
MGP_CAROLIEiJ_G0025555Rnpc39653.614ENSXCOG00000005013rnpc39750.586Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025555Rnpc39653.507ENSXMAG00000006495rnpc39753.785Xiphophorus_maculatus

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