EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0025568 (Gene tree)
Gene ID
110291171
Gene Symbol
Trmt13
Alias
4631408H19Rik|A930028L21Rik|Ccdc76
Full Name
tRNA methyltransferase 13 homolog
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
33002 bases
Position
chr3:110299756-110332757
Accession
110291171
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0060132TRM13PF05206.141e-9311
MGP_CAROLIEiJ_P0060137TRM13PF05206.145e-1811
MGP_CAROLIEiJ_P0060132zf-U11-48KPF05253.124.6e-0911
MGP_CAROLIEiJ_P0060140zf-TRM13_CCCHPF11722.85.2e-1411
MGP_CAROLIEiJ_P0060132zf-TRM13_CCCHPF11722.84.6e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0060140-810-MGP_CAROLIEiJ_P0060140146 (aa)--
MGP_CAROLIEiJ_T0060146-290--- (aa)--
MGP_CAROLIEiJ_T0060148-856--- (aa)--
MGP_CAROLIEiJ_T0060138-457-MGP_CAROLIEiJ_P006013863 (aa)--
MGP_CAROLIEiJ_T0060139-661--- (aa)--
MGP_CAROLIEiJ_T0060132-3388-MGP_CAROLIEiJ_P0060132481 (aa)XP_021013813UPI000A316FDF
MGP_CAROLIEiJ_T0060133-1615-MGP_CAROLIEiJ_P0060133292 (aa)--
MGP_CAROLIEiJ_T0060134-1722-MGP_CAROLIEiJ_P0060134176 (aa)--
MGP_CAROLIEiJ_T0060135-865--- (aa)--
MGP_CAROLIEiJ_T0060136-2012--- (aa)--
MGP_CAROLIEiJ_T0060137-538-MGP_CAROLIEiJ_P0060137179 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0025568's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025568's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0025568Trmt139986.164ENSG00000122435TRMT139987.037Homo_sapiens
MGP_CAROLIEiJ_G0025568Trmt137871.429ENSAPOG00000015131trmt139948.297Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSAMEG00000008917TRMT139983.857Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025568Trmt139855.495ENSACIG00000005804trmt1310046.853Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025568Trmt137871.429ENSAOCG00000023585trmt139948.497Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025568Trmt137871.429ENSAPEG00000004025trmt139948.810Amphiprion_percula
MGP_CAROLIEiJ_G0025568Trmt137875.510ENSATEG00000006597trmt139851.139Anabas_testudineus
MGP_CAROLIEiJ_G0025568Trmt139471.429ENSAPLG00000014924TRMT1310065.429Anas_platyrhynchos
MGP_CAROLIEiJ_G0025568Trmt138182.692ENSACAG00000003498TRMT139962.845Anolis_carolinensis
MGP_CAROLIEiJ_G0025568Trmt139986.373ENSANAG00000019525TRMT139988.889Aotus_nancymaae
MGP_CAROLIEiJ_G0025568Trmt139857.143ENSACLG00000020018trmt139953.291Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025568Trmt139461.905ENSAMXG00000017963trmt139954.603Astyanax_mexicanus
MGP_CAROLIEiJ_G0025568Trmt139490.476ENSBTAG00000015781TRMT139983.891Bos_taurus
MGP_CAROLIEiJ_G0025568Trmt1310039.683WBGene00013026Y49A3A.36430.566Caenorhabditis_elegans
MGP_CAROLIEiJ_G0025568Trmt139985.325ENSCJAG00000000200TRMT139888.889Callithrix_jacchus
MGP_CAROLIEiJ_G0025568Trmt136485.668ENSCAFG00000020021TRMT139785.668Canis_familiaris
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSCAFG00020011572TRMT139987.108Canis_lupus_dingo
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSCHIG00000015395TRMT139984.421Capra_hircus
MGP_CAROLIEiJ_G0025568Trmt139491.667ENSTSYG00000010811TRMT139887.879Carlito_syrichta
MGP_CAROLIEiJ_G0025568Trmt1352100.000ENSCAPG00000009085TRMT1310066.667Cavia_aperea
MGP_CAROLIEiJ_G0025568Trmt139985.774ENSCPOG00000000694TRMT139985.774Cavia_porcellus
MGP_CAROLIEiJ_G0025568Trmt139985.954ENSCCAG00000023772TRMT139987.963Cebus_capucinus
MGP_CAROLIEiJ_G0025568Trmt1310088.268ENSCATG00000033556TRMT139987.037Cercocebus_atys
MGP_CAROLIEiJ_G0025568Trmt139490.476ENSCLAG00000008220TRMT139983.019Chinchilla_lanigera
MGP_CAROLIEiJ_G0025568Trmt139491.667ENSCSAG00000001506TRMT139986.373Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025568Trmt139473.214ENSCPBG00000026671TRMT139967.017Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSCANG00000034659TRMT139987.963Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025568Trmt139989.004ENSCGRG00001021601Trmt1310089.004Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025568Trmt135386.822ENSCGRG00000000093-9986.822Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025568Trmt139849.724ENSCSEG00000000591trmt139948.326Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025568Trmt139851.042ENSCVAG00000017342trmt139450.314Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025568Trmt139857.203ENSDARG00000102846trmt139857.203Danio_rerio
MGP_CAROLIEiJ_G0025568Trmt139488.690ENSDNOG00000001710TRMT138983.849Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025568Trmt139488.690ENSDORG00000015808Trmt139884.534Dipodomys_ordii
MGP_CAROLIEiJ_G0025568Trmt139632.158FBgn0037435CG180489632.298Drosophila_melanogaster
MGP_CAROLIEiJ_G0025568Trmt139773.563ENSETEG00000005819TRMT139971.190Echinops_telfairi
MGP_CAROLIEiJ_G0025568Trmt139446.429ENSEBUG00000014444trmt139645.356Eptatretus_burgeri
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSEASG00005015918TRMT139986.820Equus_asinus_asinus
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSECAG00000022626TRMT139986.402Equus_caballus
MGP_CAROLIEiJ_G0025568Trmt139486.905ENSEEUG00000000294TRMT137876.358Erinaceus_europaeus
MGP_CAROLIEiJ_G0025568Trmt139464.286ENSELUG00000003803trmt139956.000Esox_lucius
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSFCAG00000030618TRMT1310087.156Felis_catus
MGP_CAROLIEiJ_G0025568Trmt139472.024ENSFALG00000002424TRMT139565.577Ficedula_albicollis
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSFDAG00000006342TRMT139986.013Fukomys_damarensis
MGP_CAROLIEiJ_G0025568Trmt1310052.778ENSFHEG00000022954trmt139852.605Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025568Trmt139455.952ENSGMOG00000013223trmt1310050.220Gadus_morhua
MGP_CAROLIEiJ_G0025568Trmt139171.779ENSGALG00000005290TRMT139863.539Gallus_gallus
MGP_CAROLIEiJ_G0025568Trmt139751.178ENSGAFG00000001577trmt138251.451Gambusia_affinis
MGP_CAROLIEiJ_G0025568Trmt1310050.685ENSGACG00000013428trmt139951.050Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025568Trmt139473.964ENSGAGG00000023303TRMT139972.527Gopherus_agassizii
MGP_CAROLIEiJ_G0025568Trmt139985.954ENSGGOG00000005616TRMT139986.111Gorilla_gorilla
MGP_CAROLIEiJ_G0025568Trmt139857.143ENSHBUG00000007754trmt139953.390Haplochromis_burtoni
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSHGLG00000002164TRMT139987.683Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSHGLG00100001618TRMT139987.683Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025568Trmt139646.552ENSHCOG00000020553trmt139747.403Hippocampus_comes
MGP_CAROLIEiJ_G0025568Trmt139464.286ENSIPUG00000024787trmt139957.021Ictalurus_punctatus
MGP_CAROLIEiJ_G0025568Trmt139986.737ENSSTOG00000013483TRMT139986.737Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025568Trmt139490.476ENSJJAG00000018012Trmt139984.355Jaculus_jaculus
MGP_CAROLIEiJ_G0025568Trmt136551.411ENSKMAG00000007639trmt139451.411Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025568Trmt137970.000ENSLBEG00000020238trmt139950.840Labrus_bergylta
MGP_CAROLIEiJ_G0025568Trmt139465.476ENSLACG00000013153TRMT1310060.349Latimeria_chalumnae
MGP_CAROLIEiJ_G0025568Trmt139863.068ENSLOCG00000000418trmt139859.091Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025568Trmt137782.973ENSLAFG00000002383TRMT1310082.973Loxodonta_africana
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSMFAG00000034681TRMT139987.963Macaca_fascicularis
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSMMUG00000004243TRMT139987.963Macaca_mulatta
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSMNEG00000036102TRMT139987.963Macaca_nemestrina
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSMLEG00000034258TRMT139987.963Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025568Trmt1310056.944ENSMAMG00000016597trmt139552.061Mastacembelus_armatus
MGP_CAROLIEiJ_G0025568Trmt139856.593ENSMZEG00005020959trmt139953.079Maylandia_zebra
MGP_CAROLIEiJ_G0025568Trmt139472.024ENSMGAG00000006970TRMT139965.877Meleagris_gallopavo
MGP_CAROLIEiJ_G0025568Trmt139494.048ENSMAUG00000010448Trmt1310087.967Mesocricetus_auratus
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSMICG00000005283TRMT1310088.073Microcebus_murinus
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSMOCG00000019914Trmt139986.611Microtus_ochrogaster
MGP_CAROLIEiJ_G0025568Trmt139150.549ENSMMOG00000007762trmt139250.549Mola_mola
MGP_CAROLIEiJ_G0025568Trmt139482.143ENSMODG00000003646TRMT139973.278Monodelphis_domestica
MGP_CAROLIEiJ_G0025568Trmt139851.705ENSMALG00000020965trmt139850.314Monopterus_albus
MGP_CAROLIEiJ_G0025568Trmt1310098.864ENSMUSG00000033439Trmt1310098.864Mus_musculus
MGP_CAROLIEiJ_G0025568Trmt1310097.159MGP_PahariEiJ_G0027014Trmt1310097.159Mus_pahari
MGP_CAROLIEiJ_G0025568Trmt1310099.432MGP_SPRETEiJ_G0026518Trmt1310099.432Mus_spretus
MGP_CAROLIEiJ_G0025568Trmt137693.750ENSMPUG00000012169-9785.606Mustela_putorius_furo
MGP_CAROLIEiJ_G0025568Trmt137291.406ENSMPUG00000002078-9882.133Mustela_putorius_furo
MGP_CAROLIEiJ_G0025568Trmt139490.476ENSMLUG00000002124TRMT139877.801Myotis_lucifugus
MGP_CAROLIEiJ_G0025568Trmt1310055.556ENSNBRG00000006783trmt139749.372Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025568Trmt139986.164ENSNLEG00000035917TRMT139987.963Nomascus_leucogenys
MGP_CAROLIEiJ_G0025568Trmt139566.071ENSMEUG00000013346-10070.161Notamacropus_eugenii
MGP_CAROLIEiJ_G0025568Trmt139489.881ENSOPRG00000012048TRMT136690.074Ochotona_princeps
MGP_CAROLIEiJ_G0025568Trmt139988.000ENSODEG00000006075-10088.000Octodon_degus
MGP_CAROLIEiJ_G0025568Trmt139856.831ENSONIG00000004574trmt139953.191Oreochromis_niloticus
MGP_CAROLIEiJ_G0025568Trmt139477.976ENSOANG00000012057TRMT139970.998Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025568Trmt139986.526ENSOCUG00000023095TRMT139986.526Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025568Trmt139747.269ENSORLG00000003320trmt139947.689Oryzias_latipes
MGP_CAROLIEiJ_G0025568Trmt139650.000ENSORLG00020005972trmt139748.211Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025568Trmt137675.000ENSORLG00015002270trmt139951.483Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025568Trmt137873.469ENSOMEG00000006724trmt139451.709Oryzias_melastigma
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSOGAG00000005618TRMT139685.565Otolemur_garnettii
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSOARG00000017983TRMT139984.421Ovis_aries
MGP_CAROLIEiJ_G0025568Trmt139985.954ENSPPAG00000043736TRMT139987.037Pan_paniscus
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSPPRG00000003424TRMT1310087.156Panthera_pardus
MGP_CAROLIEiJ_G0025568Trmt139492.857ENSPTIG00000018598TRMT1310087.156Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025568Trmt139985.954ENSPTRG00000001001TRMT139987.037Pan_troglodytes
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSPANG00000007598TRMT139987.963Papio_anubis
MGP_CAROLIEiJ_G0025568Trmt139661.047ENSPKIG00000001514trmt139755.435Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025568Trmt139471.006ENSPSIG00000012703TRMT139966.667Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025568Trmt137675.000ENSPMGG00000013298trmt139351.183Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025568Trmt139988.285ENSPEMG00000000275Trmt139988.285Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025568Trmt139152.695ENSPMAG00000000823trmt1310045.547Petromyzon_marinus
MGP_CAROLIEiJ_G0025568Trmt139481.548ENSPCIG00000007699TRMT139974.526Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025568Trmt139652.326ENSPFOG00000008675trmt139649.784Poecilia_formosa
MGP_CAROLIEiJ_G0025568Trmt139650.820ENSPLAG00000009709trmt139949.153Poecilia_latipinna
MGP_CAROLIEiJ_G0025568Trmt139649.180ENSPMEG00000022954trmt139948.093Poecilia_mexicana
MGP_CAROLIEiJ_G0025568Trmt139849.733ENSPREG00000005645trmt139450.877Poecilia_reticulata
MGP_CAROLIEiJ_G0025568Trmt139985.565ENSPPYG00000001120TRMT139985.565Pongo_abelii
MGP_CAROLIEiJ_G0025568Trmt139984.310ENSPCAG00000002340TRMT139984.310Procavia_capensis
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSPCOG00000017984TRMT139988.889Propithecus_coquereli
MGP_CAROLIEiJ_G0025568Trmt139985.774ENSPVAG00000017430TRMT139985.774Pteropus_vampyrus
MGP_CAROLIEiJ_G0025568Trmt1310055.556ENSPNYG00000013690trmt139951.483Pundamilia_nyererei
MGP_CAROLIEiJ_G0025568Trmt137679.167ENSPNAG00000022130trmt139955.675Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025568Trmt139994.375ENSRNOG00000015140Trmt139794.375Rattus_norvegicus
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSRBIG00000037686TRMT139987.963Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025568Trmt139492.262ENSRROG00000044057TRMT139987.963Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025568Trmt139491.667ENSSBOG00000026541TRMT139988.889Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025568Trmt139482.143ENSSHAG00000005213TRMT139575.701Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025568Trmt1310060.335ENSSFOG00015017560trmt139754.468Scleropages_formosus
MGP_CAROLIEiJ_G0025568Trmt139951.913ENSSMAG00000014592trmt139750.314Scophthalmus_maximus
MGP_CAROLIEiJ_G0025568Trmt139952.174ENSSDUG00000015508trmt139849.388Seriola_dumerili
MGP_CAROLIEiJ_G0025568Trmt139952.174ENSSLDG00000019060trmt139849.797Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025568Trmt138686.093ENSSARG00000010344TRMT139973.093Sorex_araneus
MGP_CAROLIEiJ_G0025568Trmt139470.238ENSSPUG00000016339TRMT139968.053Sphenodon_punctatus
MGP_CAROLIEiJ_G0025568Trmt139854.396ENSSPAG00000011922trmt139852.155Stegastes_partitus
MGP_CAROLIEiJ_G0025568Trmt139491.667ENSSSCG00000006869TRMT139984.310Sus_scrofa
MGP_CAROLIEiJ_G0025568Trmt139472.619ENSTGUG00000005253TRMT139965.086Taeniopygia_guttata
MGP_CAROLIEiJ_G0025568Trmt139651.685ENSTRUG00000008400trmt139949.580Takifugu_rubripes
MGP_CAROLIEiJ_G0025568Trmt138886.076ENSTBEG00000008911TRMT139969.007Tupaia_belangeri
MGP_CAROLIEiJ_G0025568Trmt137695.833ENSTTRG00000015302-6092.105Tursiops_truncatus
MGP_CAROLIEiJ_G0025568Trmt139879.707ENSUAMG00000017251TRMT139979.707Ursus_americanus
MGP_CAROLIEiJ_G0025568Trmt139491.071ENSUMAG00000007901TRMT139985.082Ursus_maritimus
MGP_CAROLIEiJ_G0025568Trmt138869.484ENSVPAG00000001034TRMT139969.484Vicugna_pacos
MGP_CAROLIEiJ_G0025568Trmt139690.116ENSVVUG00000021996TRMT139885.624Vulpes_vulpes
MGP_CAROLIEiJ_G0025568Trmt137980.000ENSXETG00000013204trmt139955.626Xenopus_tropicalis
MGP_CAROLIEiJ_G0025568Trmt137666.667ENSXCOG00000008120-9154.545Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025568Trmt139849.198ENSXMAG00000010765trmt139948.941Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us