EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025613 (Gene tree)
Gene ID: 110290931
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 15742 bases
Position: chr3:120831482-120847223
Accession: 110290931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0060421	RRM_1	PF00076.22	2.1e-18	1	1
MGP_CAROLIEiJ_P0060421	RRM_3	PF08777.11	2.2e-29	1	1
MGP_CAROLIEiJ_P0060423	La	PF05383.17	9.7e-23	1	1
MGP_CAROLIEiJ_P0060421	La	PF05383.17	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0060423	-	559	-	MGP_CAROLIEiJ_P0060423	110 (aa)	-	-
MGP_CAROLIEiJ_T0060421	-	2118	XM_021157843	MGP_CAROLIEiJ_P0060421	570 (aa)	XP_021013502	UPI000A316C12

Gene Model

Click here to download MGP_CAROLIEiJ_G0025613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025613	-	68	42.500	MGP_CAROLIEiJ_G0023629	-	84	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025613	-	96	81.900	ENSG00000174720	LARP7	95	81.982	Homo_sapiens
MGP_CAROLIEiJ_G0025613	-	100	79.623	ENSAMEG00000015642	LARP7	95	81.227	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025613	-	98	56.719	ENSATEG00000016238	larp7	95	55.856	Anabas_testudineus
MGP_CAROLIEiJ_G0025613	-	88	82.178	ENSAPLG00000012887	LARP7	94	67.133	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025613	-	88	79.208	ENSACAG00000010662	LARP7	91	66.726	Anolis_carolinensis
MGP_CAROLIEiJ_G0025613	-	96	81.216	ENSANAG00000031139	-	95	81.295	Aotus_nancymaae
MGP_CAROLIEiJ_G0025613	-	96	65.709	ENSANAG00000022318	-	94	66.065	Aotus_nancymaae
MGP_CAROLIEiJ_G0025613	-	98	51.777	ENSACLG00000023184	larp7	95	53.136	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025613	-	83	74.725	ENSAMXG00000002549	larp7	94	50.980	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025613	-	100	80.069	ENSBTAG00000009632	LARP7	93	81.047	Bos_taurus
MGP_CAROLIEiJ_G0025613	-	96	82.585	ENSCJAG00000003711	LARP7	95	82.671	Callithrix_jacchus
MGP_CAROLIEiJ_G0025613	-	96	79.643	ENSCAFG00000011715	LARP7	95	80.108	Canis_familiaris
MGP_CAROLIEiJ_G0025613	-	96	80.610	ENSCAFG00020017225	LARP7	95	80.686	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025613	-	96	81.475	ENSCHIG00000014163	-	95	81.555	Capra_hircus
MGP_CAROLIEiJ_G0025613	-	100	68.412	ENSCHIG00000013971	-	86	84.163	Capra_hircus
MGP_CAROLIEiJ_G0025613	-	90	81.731	ENSTSYG00000006769	-	95	81.818	Carlito_syrichta
MGP_CAROLIEiJ_G0025613	-	96	74.040	ENSTSYG00000035188	-	97	73.761	Carlito_syrichta
MGP_CAROLIEiJ_G0025613	-	100	72.775	ENSCAPG00000009328	LARP7	95	72.761	Cavia_aperea
MGP_CAROLIEiJ_G0025613	-	100	80.977	ENSCPOG00000011830	LARP7	95	81.536	Cavia_porcellus
MGP_CAROLIEiJ_G0025613	-	96	75.137	ENSCCAG00000023563	-	100	75.137	Cebus_capucinus
MGP_CAROLIEiJ_G0025613	-	96	82.648	ENSCCAG00000026787	-	95	82.734	Cebus_capucinus
MGP_CAROLIEiJ_G0025613	-	96	81.867	ENSCATG00000043535	LARP7	95	81.949	Cercocebus_atys
MGP_CAROLIEiJ_G0025613	-	100	82.373	ENSCLAG00000005894	LARP7	95	83.364	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025613	-	96	82.047	ENSCSAG00000003810	LARP7	95	82.130	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025613	-	100	79.138	ENSCHOG00000002379	-	95	80.254	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025613	-	93	71.271	ENSCHOG00000008967	-	100	71.087	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025613	-	80	88.764	ENSCPBG00000004919	LARP7	96	70.018	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025613	-	80	37.576	ENSCING00000021685	-	74	37.107	Ciona_intestinalis
MGP_CAROLIEiJ_G0025613	-	96	82.079	ENSCANG00000031482	LARP7	94	82.162	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025613	-	88	92.784	ENSCGRG00001012747	-	99	81.888	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025613	-	100	91.972	ENSCGRG00001025050	-	100	92.321	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025613	-	88	96.907	ENSCGRG00000001141	-	100	84.699	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025613	-	88	92.784	ENSCGRG00000007642	-	99	82.909	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025613	-	96	52.014	ENSCVAG00000016852	larp7	78	73.333	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025613	-	98	53.571	ENSDARG00000017315	larp7	93	50.266	Danio_rerio
MGP_CAROLIEiJ_G0025613	-	100	79.010	ENSDNOG00000013761	LARP7	95	80.969	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025613	-	96	83.636	ENSDORG00000008896	-	95	82.491	Dipodomys_ordii
MGP_CAROLIEiJ_G0025613	-	100	76.289	ENSETEG00000011692	LARP7	95	77.899	Echinops_telfairi
MGP_CAROLIEiJ_G0025613	-	100	80.308	ENSEASG00005005592	LARP7	95	81.949	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025613	-	100	80.308	ENSECAG00000000834	LARP7	95	81.949	Equus_caballus
MGP_CAROLIEiJ_G0025613	-	92	79.278	ENSEEUG00000012824	LARP7	95	79.350	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025613	-	82	74.444	ENSELUG00000015341	larp7	94	52.356	Esox_lucius
MGP_CAROLIEiJ_G0025613	-	96	81.655	ENSFCAG00000031966	LARP7	95	81.736	Felis_catus
MGP_CAROLIEiJ_G0025613	-	87	84.694	ENSFALG00000000972	LARP7	92	69.821	Ficedula_albicollis
MGP_CAROLIEiJ_G0025613	-	96	82.182	ENSFDAG00000014048	-	95	82.267	Fukomys_damarensis
MGP_CAROLIEiJ_G0025613	-	100	75.130	ENSFDAG00000011855	-	100	75.130	Fukomys_damarensis
MGP_CAROLIEiJ_G0025613	-	72	70.886	ENSGMOG00000010536	larp7	94	47.314	Gadus_morhua
MGP_CAROLIEiJ_G0025613	-	88	84.158	ENSGALG00000012048	LARP7	94	66.726	Gallus_gallus
MGP_CAROLIEiJ_G0025613	-	88	65.306	ENSGACG00000019618	larp7	79	70.556	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025613	-	99	67.112	ENSGAGG00000024520	LARP7	95	69.284	Gopherus_agassizii
MGP_CAROLIEiJ_G0025613	-	87	78.543	ENSGGOG00000006438	-	97	78.740	Gorilla_gorilla
MGP_CAROLIEiJ_G0025613	-	96	81.900	ENSGGOG00000023567	-	95	81.982	Gorilla_gorilla
MGP_CAROLIEiJ_G0025613	-	98	51.946	ENSHBUG00000019223	larp7	95	52.613	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025613	-	96	80.610	ENSHGLG00000002716	LARP7	95	80.505	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025613	-	96	80.610	ENSHGLG00100000332	LARP7	95	80.505	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025613	-	97	53.952	ENSIPUG00000019886	larp7	94	52.364	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025613	-	100	81.583	ENSSTOG00000011789	LARP7	100	82.788	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025613	-	100	83.709	ENSJJAG00000000257	-	100	84.229	Jaculus_jaculus
MGP_CAROLIEiJ_G0025613	-	76	72.941	ENSKMAG00000005057	larp7	95	50.355	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025613	-	82	66.667	ENSLBEG00000018789	-	78	70.391	Labrus_bergylta
MGP_CAROLIEiJ_G0025613	-	98	51.986	ENSLBEG00000020062	larp7	95	51.596	Labrus_bergylta
MGP_CAROLIEiJ_G0025613	-	99	57.763	ENSLACG00000013744	LARP7	95	57.958	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025613	-	68	78.667	ENSLOCG00000011608	larp7	95	47.059	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025613	-	100	81.411	ENSLAFG00000015769	LARP7	95	83.122	Loxodonta_africana
MGP_CAROLIEiJ_G0025613	-	96	81.867	ENSMFAG00000036506	LARP7	95	81.949	Macaca_fascicularis
MGP_CAROLIEiJ_G0025613	-	96	81.867	ENSMMUG00000017911	LARP7	95	81.949	Macaca_mulatta
MGP_CAROLIEiJ_G0025613	-	96	82.047	ENSMNEG00000034758	LARP7	100	80.594	Macaca_nemestrina
MGP_CAROLIEiJ_G0025613	-	96	82.047	ENSMLEG00000026154	LARP7	95	82.130	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025613	-	98	51.777	ENSMZEG00005002084	larp7	95	53.136	Maylandia_zebra
MGP_CAROLIEiJ_G0025613	-	88	84.158	ENSMGAG00000010947	LARP7	95	69.565	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025613	-	88	95.876	ENSMAUG00000005625	-	100	75.475	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025613	-	96	82.406	ENSMICG00000031035	LARP7	95	82.671	Microcebus_murinus
MGP_CAROLIEiJ_G0025613	-	89	89.258	ENSMOCG00000015761	-	100	89.258	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025613	-	100	91.812	ENSMOCG00000012519	-	100	92.160	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025613	-	68	72.000	ENSMMOG00000011816	larp7	73	69.832	Mola_mola
MGP_CAROLIEiJ_G0025613	-	88	84.314	ENSMODG00000005669	LARP7	95	72.598	Monodelphis_domestica
MGP_CAROLIEiJ_G0025613	-	75	75.610	ENSMALG00000009893	larp7	78	75.000	Monopterus_albus
MGP_CAROLIEiJ_G0025613	-	100	98.601	ENSMUSG00000027968	Larp7	100	98.765	Mus_musculus
MGP_CAROLIEiJ_G0025613	-	100	97.378	MGP_PahariEiJ_G0027060	-	100	97.378	Mus_pahari
MGP_CAROLIEiJ_G0025613	-	100	98.255	MGP_SPRETEiJ_G0026566	Larp7	100	98.255	Mus_spretus
MGP_CAROLIEiJ_G0025613	-	96	81.149	ENSMPUG00000008331	-	95	81.227	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025613	-	95	77.982	ENSMPUG00000018052	-	100	78.716	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025613	-	86	74.455	ENSMLUG00000027214	LARP7	100	74.653	Myotis_lucifugus
MGP_CAROLIEiJ_G0025613	-	100	82.616	ENSNGAG00000007368	-	100	83.305	Nannospalax_galili
MGP_CAROLIEiJ_G0025613	-	68	69.333	ENSNBRG00000007968	larp7	72	73.743	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025613	-	96	82.226	ENSNLEG00000016354	LARP7	94	81.949	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025613	-	88	71.094	ENSMEUG00000004739	LARP7	100	71.289	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025613	-	85	86.466	ENSOPRG00000009594	-	83	86.466	Ochotona_princeps
MGP_CAROLIEiJ_G0025613	-	88	88.776	ENSODEG00000011121	LARP7	98	78.261	Octodon_degus
MGP_CAROLIEiJ_G0025613	-	96	53.541	ENSONIG00000008763	larp7	95	52.787	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025613	-	99	72.222	ENSOANG00000009298	LARP7	94	72.872	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025613	-	100	78.082	ENSOCUG00000007073	LARP7	95	79.099	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025613	-	96	52.899	ENSORLG00000004978	larp7	94	49.367	Oryzias_latipes
MGP_CAROLIEiJ_G0025613	-	96	53.080	ENSORLG00020013825	larp7	94	49.548	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025613	-	68	73.333	ENSORLG00015011435	larp7	75	71.667	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025613	-	72	75.949	ENSOMEG00000006920	larp7	94	50.000	Oryzias_melastigma
MGP_CAROLIEiJ_G0025613	-	96	83.005	ENSOGAG00000001643	LARP7	95	83.094	Otolemur_garnettii
MGP_CAROLIEiJ_G0025613	-	96	81.038	ENSOARG00000001809	LARP7	95	81.115	Ovis_aries
MGP_CAROLIEiJ_G0025613	-	96	81.541	ENSPPAG00000038420	LARP7	94	81.622	Pan_paniscus
MGP_CAROLIEiJ_G0025613	-	96	81.508	ENSPPRG00000023256	LARP7	95	81.588	Panthera_pardus
MGP_CAROLIEiJ_G0025613	-	92	80.675	ENSPTIG00000021146	LARP7	92	80.755	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025613	-	96	81.900	ENSPTRG00000016380	LARP7	95	81.982	Pan_troglodytes
MGP_CAROLIEiJ_G0025613	-	96	82.290	ENSPANG00000006701	LARP7	94	82.374	Papio_anubis
MGP_CAROLIEiJ_G0025613	-	98	56.574	ENSPKIG00000023484	larp7	94	56.250	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025613	-	87	87.755	ENSPSIG00000014419	LARP7	93	68.280	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025613	-	65	72.222	ENSPMGG00000019887	larp7	82	72.067	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025613	-	100	89.438	ENSPEMG00000013978	-	100	89.949	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025613	-	87	85.859	ENSPCIG00000020284	LARP7	98	79.487	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025613	-	96	82.258	ENSPPYG00000015010	LARP7	95	82.342	Pongo_abelii
MGP_CAROLIEiJ_G0025613	-	59	100.000	ENSPCAG00000003373	-	67	100.000	Procavia_capensis
MGP_CAROLIEiJ_G0025613	-	77	90.000	ENSPCOG00000023946	LARP7	94	72.361	Propithecus_coquereli
MGP_CAROLIEiJ_G0025613	-	100	78.082	ENSPVAG00000000282	LARP7	100	78.253	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025613	-	79	66.667	ENSPNYG00000023801	larp7	72	73.184	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025613	-	96	53.025	ENSPNAG00000017554	larp7	94	52.688	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025613	-	100	91.972	ENSRNOG00000048989	Larp7	100	92.308	Rattus_norvegicus
MGP_CAROLIEiJ_G0025613	-	82	92.593	ENSRBIG00000031916	LARP7	93	92.593	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025613	-	96	81.688	ENSRROG00000033414	LARP7	95	81.769	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025613	-	96	61.290	ENSSBOG00000022652	-	95	60.791	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025613	-	96	83.363	ENSSBOG00000030886	-	95	83.453	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025613	-	87	85.859	ENSSHAG00000008153	LARP7	95	69.504	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025613	-	98	55.208	ENSSFOG00015019344	larp7	94	51.712	Scleropages_formosus
MGP_CAROLIEiJ_G0025613	-	96	56.989	ENSSMAG00000011296	larp7	94	55.277	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025613	-	86	68.421	ENSSLDG00000005128	larp7	81	75.000	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025613	-	52	74.419	ENSSARG00000000190	-	99	73.290	Sorex_araneus
MGP_CAROLIEiJ_G0025613	-	98	55.113	ENSSPAG00000016066	larp7	95	54.204	Stegastes_partitus
MGP_CAROLIEiJ_G0025613	-	96	80.251	ENSSSCG00000009119	LARP7	95	80.325	Sus_scrofa
MGP_CAROLIEiJ_G0025613	-	87	84.694	ENSTGUG00000001804	LARP7	95	69.134	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025613	-	72	78.481	ENSTRUG00000004996	larp7	95	50.275	Takifugu_rubripes
MGP_CAROLIEiJ_G0025613	-	98	47.332	ENSTNIG00000007183	larp7	95	47.387	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025613	-	96	79.354	ENSTBEG00000009188	LARP7	95	79.422	Tupaia_belangeri
MGP_CAROLIEiJ_G0025613	-	91	78.327	ENSTTRG00000005233	LARP7	100	78.327	Tursiops_truncatus
MGP_CAROLIEiJ_G0025613	-	96	80.610	ENSUAMG00000000836	LARP7	95	80.686	Ursus_americanus
MGP_CAROLIEiJ_G0025613	-	95	80.146	ENSUMAG00000002263	LARP7	93	80.220	Ursus_maritimus
MGP_CAROLIEiJ_G0025613	-	96	81.395	ENSVPAG00000010502	LARP7	95	81.475	Vicugna_pacos
MGP_CAROLIEiJ_G0025613	-	96	80.790	ENSVVUG00000002274	LARP7	95	80.866	Vulpes_vulpes
MGP_CAROLIEiJ_G0025613	-	80	82.022	ENSXETG00000024097	larp7	94	61.307	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025613	-	87	59.375	ENSXCOG00000004883	larp7	83	72.222	Xiphophorus_couchianus