EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025643 (Gene tree)
Gene ID: 110291674
Gene Symbol: Gimd1
Alias: Gm5549
Full Name: GIMAP family P-loop NTPase domain containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 15170 bases
Position: chr3:126073376-126088545
Accession: 110291674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0060558	MMR_HSR1	PF01926.23	2.1e-05	1	1
MGP_CAROLIEiJ_P0060559	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0060558	-	1410	XM_021158918	MGP_CAROLIEiJ_P0060558	217 (aa)	XP_021014577	UPI000A315E3C
MGP_CAROLIEiJ_T0060559	-	654	-	MGP_CAROLIEiJ_P0060559	217 (aa)	-	UPI000A315E3C

Gene Model

Click here to download MGP_CAROLIEiJ_G0025643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025643	Gimd1	99	74.537	ENSAMEG00000017505	GIMD1	99	74.537	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025643	Gimd1	99	54.206	ENSAPLG00000006141	GIMD1	97	54.206	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.296	ENSANAG00000034671	GIMD1	90	71.296	Aotus_nancymaae
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.370	ENSBTAG00000047891	GIMD1	99	70.370	Bos_taurus
MGP_CAROLIEiJ_G0025643	Gimd1	99	73.611	ENSCAFG00000030716	GIMD1	99	73.611	Canis_familiaris
MGP_CAROLIEiJ_G0025643	Gimd1	99	73.611	ENSCAFG00020009998	GIMD1	99	73.611	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025643	Gimd1	99	68.981	ENSCHIG00000021709	-	99	68.981	Capra_hircus
MGP_CAROLIEiJ_G0025643	Gimd1	99	68.981	ENSTSYG00000036691	GIMD1	90	68.981	Carlito_syrichta
MGP_CAROLIEiJ_G0025643	Gimd1	99	69.907	ENSCCAG00000008247	GIMD1	99	69.907	Cebus_capucinus
MGP_CAROLIEiJ_G0025643	Gimd1	99	73.148	ENSCLAG00000003485	GIMD1	99	73.148	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.759	ENSCSAG00000003981	GIMD1	99	71.759	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025643	Gimd1	99	57.009	ENSCPBG00000004061	GIMD1	99	57.009	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.296	ENSCANG00000033706	GIMD1	90	71.296	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025643	Gimd1	100	84.332	ENSCGRG00001011642	Gimd1	100	84.332	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025643	Gimd1	100	84.332	ENSCGRG00000008011	Gimd1	100	84.332	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.833	ENSDNOG00000037621	GIMD1	100	70.833	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025643	Gimd1	99	74.537	ENSDORG00000026034	Gimd1	99	74.537	Dipodomys_ordii
MGP_CAROLIEiJ_G0025643	Gimd1	99	75.926	ENSFCAG00000036567	GIMD1	99	75.926	Felis_catus
MGP_CAROLIEiJ_G0025643	Gimd1	60	58.779	ENSGAGG00000023885	-	64	58.779	Gopherus_agassizii
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.370	ENSHGLG00000003404	GIMD1	99	70.370	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.370	ENSHGLG00100013599	GIMD1	99	70.370	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025643	Gimd1	99	75.000	ENSSTOG00000026704	GIMD1	99	75.000	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025643	Gimd1	99	75.000	ENSJJAG00000017692	Gimd1	99	75.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0025643	Gimd1	99	48.131	ENSLACG00000011319	GIMD1	99	48.131	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025643	Gimd1	99	68.056	ENSLAFG00000027733	GIMD1	99	68.056	Loxodonta_africana
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.833	ENSMFAG00000007005	GIMD1	90	70.833	Macaca_fascicularis
MGP_CAROLIEiJ_G0025643	Gimd1	99	63.889	ENSMMUG00000047132	GIMD1	99	63.889	Macaca_mulatta
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.296	ENSMNEG00000032315	GIMD1	99	71.296	Macaca_nemestrina
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.296	ENSMLEG00000035992	GIMD1	90	71.296	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025643	Gimd1	100	84.793	ENSMAUG00000019274	Gimd1	100	84.793	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025643	Gimd1	99	68.056	ENSMICG00000045116	GIMD1	90	68.056	Microcebus_murinus
MGP_CAROLIEiJ_G0025643	Gimd1	100	81.106	ENSMOCG00000017308	Gimd1	100	81.106	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025643	Gimd1	99	64.486	ENSMODG00000029257	GIMD1	99	64.486	Monodelphis_domestica
MGP_CAROLIEiJ_G0025643	Gimd1	100	96.774	ENSMUSG00000091721	Gimd1	100	96.774	Mus_musculus
MGP_CAROLIEiJ_G0025643	Gimd1	100	92.166	MGP_PahariEiJ_G0027092	Gimd1	100	92.166	Mus_pahari
MGP_CAROLIEiJ_G0025643	Gimd1	100	97.696	MGP_SPRETEiJ_G0026596	Gimd1	100	97.696	Mus_spretus
MGP_CAROLIEiJ_G0025643	Gimd1	99	75.926	ENSMPUG00000008944	GIMD1	99	75.926	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025643	Gimd1	99	76.389	ENSMLUG00000029629	GIMD1	99	76.389	Myotis_lucifugus
MGP_CAROLIEiJ_G0025643	Gimd1	99	72.222	ENSODEG00000011081	GIMD1	99	72.222	Octodon_degus
MGP_CAROLIEiJ_G0025643	Gimd1	99	68.519	ENSOCUG00000026543	GIMD1	99	68.519	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025643	Gimd1	99	74.074	ENSOGAG00000026809	GIMD1	99	74.074	Otolemur_garnettii
MGP_CAROLIEiJ_G0025643	Gimd1	99	69.444	ENSOARG00000009048	GIMD1	99	69.444	Ovis_aries
MGP_CAROLIEiJ_G0025643	Gimd1	99	76.389	ENSPPRG00000002041	GIMD1	99	76.389	Panthera_pardus
MGP_CAROLIEiJ_G0025643	Gimd1	99	75.926	ENSPTIG00000007315	GIMD1	99	75.926	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025643	Gimd1	99	71.759	ENSPANG00000024995	GIMD1	90	71.759	Papio_anubis
MGP_CAROLIEiJ_G0025643	Gimd1	100	83.871	ENSPEMG00000010104	Gimd1	100	83.871	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025643	Gimd1	99	70.370	ENSPCOG00000012757	GIMD1	90	70.370	Propithecus_coquereli
MGP_CAROLIEiJ_G0025643	Gimd1	99	86.512	ENSRNOG00000042721	Gimd1	99	86.512	Rattus_norvegicus
MGP_CAROLIEiJ_G0025643	Gimd1	99	72.222	ENSRBIG00000028531	GIMD1	90	72.222	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025643	Gimd1	99	72.222	ENSRROG00000040910	GIMD1	90	72.222	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025643	Gimd1	99	69.444	ENSSBOG00000033555	GIMD1	90	69.444	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025643	Gimd1	99	54.206	ENSSPUG00000006363	GIMD1	99	54.206	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025643	Gimd1	99	74.074	ENSSSCG00000039563	GIMD1	87	74.074	Sus_scrofa
MGP_CAROLIEiJ_G0025643	Gimd1	99	76.852	ENSUAMG00000024677	GIMD1	99	76.852	Ursus_americanus
MGP_CAROLIEiJ_G0025643	Gimd1	99	76.852	ENSUMAG00000000374	GIMD1	99	76.852	Ursus_maritimus
MGP_CAROLIEiJ_G0025643	Gimd1	99	72.685	ENSVVUG00000017326	GIMD1	99	72.685	Vulpes_vulpes