EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025755 (Gene tree)
Gene ID: 110291357
Gene Symbol: Tyw3
Alias: 5230400J09Rik
Full Name: tRNA-yW synthesizing protein 3 homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 19359 bases
Position: chr3:147565418-147584776
Accession: 110291357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0061159	TYW3	PF02676.14	3.3e-57	1	1
MGP_CAROLIEiJ_P0061160	TYW3	PF02676.14	3.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0061160	-	3793	-	MGP_CAROLIEiJ_P0061160	144 (aa)	-	-
MGP_CAROLIEiJ_T0061161	-	628	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061162	-	490	-	MGP_CAROLIEiJ_P0061162	160 (aa)	-	-
MGP_CAROLIEiJ_T0061159	-	4012	-	MGP_CAROLIEiJ_P0061159	257 (aa)	XP_021014129	UPI000A31B37B

Gene Model

Click here to download MGP_CAROLIEiJ_G0025755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSG00000162623	TYW3	100	91.071	Homo_sapiens
MGP_CAROLIEiJ_G0025755	Tyw3	94	65.441	ENSAPOG00000009462	tyw3	74	64.796	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSAMEG00000003461	TYW3	99	70.155	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025755	Tyw3	100	60.417	ENSACIG00000002242	tyw3	92	58.904	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025755	Tyw3	94	62.222	ENSAOCG00000002161	tyw3	73	63.077	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025755	Tyw3	77	47.748	ENSAPEG00000009395	tyw3	93	58.824	Amphiprion_percula
MGP_CAROLIEiJ_G0025755	Tyw3	94	59.559	ENSATEG00000004411	-	76	64.246	Anabas_testudineus
MGP_CAROLIEiJ_G0025755	Tyw3	94	59.559	ENSATEG00000004518	tyw3	76	64.246	Anabas_testudineus
MGP_CAROLIEiJ_G0025755	Tyw3	97	56.954	ENSACAG00000011380	TYW3	87	55.932	Anolis_carolinensis
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSANAG00000034485	TYW3	99	71.318	Aotus_nancymaae
MGP_CAROLIEiJ_G0025755	Tyw3	94	62.590	ENSACLG00000022833	tyw3	77	63.784	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025755	Tyw3	100	56.944	ENSAMXG00000039965	tyw3	99	50.196	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSBTAG00000005196	TYW3	99	68.992	Bos_taurus
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSCJAG00000006550	TYW3	99	72.374	Callithrix_jacchus
MGP_CAROLIEiJ_G0025755	Tyw3	82	68.224	ENSCAFG00000032209	TYW3	99	68.224	Canis_familiaris
MGP_CAROLIEiJ_G0025755	Tyw3	99	76.224	ENSCAFG00020017095	TYW3	92	70.428	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSCHIG00000009333	TYW3	99	70.155	Capra_hircus
MGP_CAROLIEiJ_G0025755	Tyw3	93	69.710	ENSTSYG00000006369	TYW3	97	69.710	Carlito_syrichta
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSCCAG00000034210	TYW3	99	72.481	Cebus_capucinus
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSCATG00000044397	TYW3	98	72.441	Cercocebus_atys
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSCLAG00000004370	TYW3	95	72.868	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSCSAG00000001387	TYW3	98	72.441	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025755	Tyw3	82	76.271	ENSCHOG00000005179	TYW3	68	76.271	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025755	Tyw3	97	65.035	ENSCPBG00000017047	TYW3	99	58.268	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSCANG00000036108	TYW3	98	72.047	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	87.500	ENSCGRG00001022820	Tyw3	100	87.500	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025755	Tyw3	77	79.397	ENSCGRG00000003132	Tyw3	100	87.209	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025755	Tyw3	100	60.000	ENSCSEG00000021219	tyw3	72	61.881	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025755	Tyw3	95	60.584	ENSCVAG00000003270	tyw3	80	60.606	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025755	Tyw3	96	56.522	ENSDARG00000038222	tyw3	97	48.790	Danio_rerio
MGP_CAROLIEiJ_G0025755	Tyw3	100	75.694	ENSDNOG00000033863	TYW3	98	71.032	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025755	Tyw3	53	64.748	ENSDORG00000002718	-	99	64.748	Dipodomys_ordii
MGP_CAROLIEiJ_G0025755	Tyw3	75	68.657	ENSETEG00000012572	TYW3	98	68.657	Echinops_telfairi
MGP_CAROLIEiJ_G0025755	Tyw3	58	51.807	ENSEBUG00000014020	tyw3	54	51.471	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025755	Tyw3	100	82.639	ENSEASG00005007776	TYW3	99	72.692	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025755	Tyw3	100	82.639	ENSECAG00000007888	TYW3	99	72.692	Equus_caballus
MGP_CAROLIEiJ_G0025755	Tyw3	100	62.500	ENSEEUG00000009289	TYW3	98	59.843	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025755	Tyw3	97	56.835	ENSELUG00000023000	tyw3	95	54.202	Esox_lucius
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSFCAG00000035340	TYW3	99	72.031	Felis_catus
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSFDAG00000003816	TYW3	99	71.318	Fukomys_damarensis
MGP_CAROLIEiJ_G0025755	Tyw3	94	62.222	ENSFHEG00000001347	tyw3	79	62.051	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0025755	Tyw3	97	61.379	ENSGALG00000032549	TYW3	98	55.939	Gallus_gallus
MGP_CAROLIEiJ_G0025755	Tyw3	94	63.704	ENSGAFG00000012457	tyw3	98	53.077	Gambusia_affinis
MGP_CAROLIEiJ_G0025755	Tyw3	94	61.481	ENSGACG00000014630	tyw3	86	62.564	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSGGOG00000013676	TYW3	99	69.767	Gorilla_gorilla
MGP_CAROLIEiJ_G0025755	Tyw3	72	60.577	ENSHBUG00000007007	-	100	60.577	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSHGLG00000004440	TYW3	99	71.705	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025755	Tyw3	100	70.833	ENSHGLG00100018315	TYW3	99	68.217	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025755	Tyw3	94	54.412	ENSHCOG00000016590	TYW3	98	53.960	Hippocampus_comes
MGP_CAROLIEiJ_G0025755	Tyw3	100	58.333	ENSIPUG00000012907	tyw3	67	59.799	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025755	Tyw3	99	67.133	ENSSTOG00000028816	TYW3	94	64.729	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	80.556	ENSJJAG00000005103	-	100	80.556	Jaculus_jaculus
MGP_CAROLIEiJ_G0025755	Tyw3	94	65.926	ENSKMAG00000020761	tyw3	70	65.803	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025755	Tyw3	92	60.150	ENSLBEG00000021318	tyw3	74	62.570	Labrus_bergylta
MGP_CAROLIEiJ_G0025755	Tyw3	100	58.333	ENSLACG00000012636	TYW3	99	50.391	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025755	Tyw3	100	56.250	ENSLOCG00000003437	tyw3	100	50.980	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	74.306	ENSLAFG00000011373	TYW3	98	70.472	Loxodonta_africana
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSMFAG00000003496	TYW3	98	71.654	Macaca_fascicularis
MGP_CAROLIEiJ_G0025755	Tyw3	100	61.111	ENSMMUG00000014595	TYW3	98	62.992	Macaca_mulatta
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSMNEG00000028346	TYW3	98	71.654	Macaca_nemestrina
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSMLEG00000041647	TYW3	98	72.047	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025755	Tyw3	100	59.028	ENSMAMG00000010987	tyw3	76	62.687	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.830	ENSMZEG00005023808	tyw3	75	62.687	Maylandia_zebra
MGP_CAROLIEiJ_G0025755	Tyw3	65	54.386	ENSMGAG00000012152	TYW3	98	54.386	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025755	Tyw3	100	53.696	ENSMAUG00000000522	Tyw3	99	77.907	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025755	Tyw3	100	80.556	ENSMICG00000015883	TYW3	97	75.969	Microcebus_murinus
MGP_CAROLIEiJ_G0025755	Tyw3	72	92.593	ENSMOCG00000021348	Tyw3	97	80.741	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025755	Tyw3	92	62.406	ENSMMOG00000021442	tyw3	89	56.388	Mola_mola
MGP_CAROLIEiJ_G0025755	Tyw3	100	71.528	ENSMODG00000019082	TYW3	91	63.813	Monodelphis_domestica
MGP_CAROLIEiJ_G0025755	Tyw3	100	61.111	ENSMALG00000014442	tyw3	75	64.179	Monopterus_albus
MGP_CAROLIEiJ_G0025755	Tyw3	100	99.306	ENSMUSG00000047583	Tyw3	100	99.306	Mus_musculus
MGP_CAROLIEiJ_G0025755	Tyw3	100	96.528	MGP_PahariEiJ_G0027206	Tyw3	100	96.528	Mus_pahari
MGP_CAROLIEiJ_G0025755	Tyw3	100	98.611	MGP_SPRETEiJ_G0026708	Tyw3	100	98.611	Mus_spretus
MGP_CAROLIEiJ_G0025755	Tyw3	100	80.556	ENSMPUG00000010967	TYW3	99	71.318	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSMLUG00000005999	TYW3	99	70.270	Myotis_lucifugus
MGP_CAROLIEiJ_G0025755	Tyw3	100	81.944	ENSNGAG00000000586	-	99	81.944	Nannospalax_galili
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSNLEG00000009556	TYW3	99	72.763	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025755	Tyw3	82	74.576	ENSOPRG00000014182	TYW3	99	52.713	Ochotona_princeps
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSODEG00000005361	TYW3	99	78.472	Octodon_degus
MGP_CAROLIEiJ_G0025755	Tyw3	100	62.500	ENSONIG00000019965	tyw3	100	62.814	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025755	Tyw3	74	57.812	ENSOANG00000002172	-	95	57.812	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025755	Tyw3	100	75.000	ENSOCUG00000003043	TYW3	99	69.380	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025755	Tyw3	96	59.420	ENSORLG00000004470	tyw3	76	62.887	Oryzias_latipes
MGP_CAROLIEiJ_G0025755	Tyw3	96	58.696	ENSORLG00020003793	tyw3	76	62.371	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025755	Tyw3	96	60.145	ENSORLG00015006950	tyw3	76	62.887	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025755	Tyw3	94	62.963	ENSOMEG00000016176	tyw3	95	59.722	Oryzias_melastigma
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSOGAG00000011590	-	94	73.663	Otolemur_garnettii
MGP_CAROLIEiJ_G0025755	Tyw3	100	69.655	ENSOGAG00000025029	-	99	66.279	Otolemur_garnettii
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSOARG00000012508	TYW3	99	69.380	Ovis_aries
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSPPAG00000043438	TYW3	99	70.155	Pan_paniscus
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSPPRG00000023209	TYW3	99	72.587	Panthera_pardus
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSPTIG00000017448	TYW3	99	71.648	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSPTRG00000000867	TYW3	99	70.155	Pan_troglodytes
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSPANG00000013397	TYW3	98	72.441	Papio_anubis
MGP_CAROLIEiJ_G0025755	Tyw3	94	50.943	ENSPKIG00000009802	tyw3	99	47.059	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025755	Tyw3	65	60.355	ENSPSIG00000008432	TYW3	99	60.355	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025755	Tyw3	94	58.824	ENSPMGG00000005290	tyw3	97	50.593	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	93.056	ENSPEMG00000013100	Tyw3	100	93.056	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSPCIG00000024204	TYW3	80	68.182	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.121	ENSPFOG00000000927	tyw3	85	58.515	Poecilia_formosa
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.121	ENSPLAG00000009891	tyw3	74	63.819	Poecilia_latipinna
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.121	ENSPMEG00000002006	tyw3	81	65.000	Poecilia_mexicana
MGP_CAROLIEiJ_G0025755	Tyw3	98	60.993	ENSPREG00000012341	tyw3	74	61.809	Poecilia_reticulata
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.778	ENSPPYG00000001234	TYW3	99	72.093	Pongo_abelii
MGP_CAROLIEiJ_G0025755	Tyw3	100	74.306	ENSPCAG00000000524	TYW3	99	70.039	Procavia_capensis
MGP_CAROLIEiJ_G0025755	Tyw3	100	81.250	ENSPCOG00000023207	TYW3	97	76.357	Propithecus_coquereli
MGP_CAROLIEiJ_G0025755	Tyw3	100	76.389	ENSPVAG00000002356	TYW3	99	68.359	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025755	Tyw3	98	62.069	ENSPNYG00000017982	tyw3	63	62.069	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025755	Tyw3	100	56.944	ENSPNAG00000028431	tyw3	99	50.988	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025755	Tyw3	100	93.056	ENSRNOG00000028328	Tyw3	88	89.147	Rattus_norvegicus
MGP_CAROLIEiJ_G0025755	Tyw3	52	70.149	ENSRBIG00000040137	-	97	70.149	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025755	Tyw3	100	75.000	ENSRROG00000034171	TYW3	98	71.260	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025755	Tyw3	81	33.562	YGL050W	-	75	31.455	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0025755	Tyw3	100	77.083	ENSSBOG00000022917	TYW3	99	71.595	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025755	Tyw3	99	58.451	ENSSFOG00015021842	tyw3	99	50.588	Scleropages_formosus
MGP_CAROLIEiJ_G0025755	Tyw3	98	60.284	ENSSMAG00000019609	tyw3	86	57.391	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025755	Tyw3	96	62.319	ENSSDUG00000003674	tyw3	85	58.222	Seriola_dumerili
MGP_CAROLIEiJ_G0025755	Tyw3	96	62.319	ENSSLDG00000010425	tyw3	85	58.667	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025755	Tyw3	76	64.796	ENSSARG00000001097	TYW3	98	64.796	Sorex_araneus
MGP_CAROLIEiJ_G0025755	Tyw3	97	62.937	ENSSPUG00000007880	TYW3	98	57.312	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025755	Tyw3	94	62.500	ENSSPAG00000013786	tyw3	71	63.776	Stegastes_partitus
MGP_CAROLIEiJ_G0025755	Tyw3	100	75.000	ENSSSCG00000003779	TYW3	99	68.966	Sus_scrofa
MGP_CAROLIEiJ_G0025755	Tyw3	97	61.151	ENSTRUG00000023563	tyw3	89	55.649	Takifugu_rubripes
MGP_CAROLIEiJ_G0025755	Tyw3	97	59.712	ENSTNIG00000003368	tyw3	96	62.105	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSTBEG00000017002	TYW3	99	71.705	Tupaia_belangeri
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSTTRG00000010464	TYW3	99	72.797	Tursiops_truncatus
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSUAMG00000010803	TYW3	99	71.429	Ursus_americanus
MGP_CAROLIEiJ_G0025755	Tyw3	100	78.472	ENSUMAG00000006460	TYW3	98	71.713	Ursus_maritimus
MGP_CAROLIEiJ_G0025755	Tyw3	100	79.167	ENSVPAG00000006900	TYW3	99	82.703	Vicugna_pacos
MGP_CAROLIEiJ_G0025755	Tyw3	99	76.224	ENSVVUG00000006902	TYW3	92	69.650	Vulpes_vulpes
MGP_CAROLIEiJ_G0025755	Tyw3	100	59.722	ENSXETG00000002996	tyw3	94	54.622	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.380	ENSXCOG00000000715	tyw3	73	65.079	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025755	Tyw3	98	63.380	ENSXMAG00000006464	tyw3	76	65.079	Xiphophorus_maculatus