EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025779 (Gene tree)
Gene ID: 110292531
Gene Symbol: -
Alias: -
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 41639 bases
Position: chr4:33494-75132
Accession: 110292531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0061295	Methyltransf_15	PF09445.10	1.7e-40	1	1
MGP_CAROLIEiJ_P0061295	UPF0020	PF01170.18	3.4e-05	1	1
MGP_CAROLIEiJ_P0061295	Met_10	PF02475.16	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0061300	-	685	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061298	-	550	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061299	-	519	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061297	-	646	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061295	-	4304	-	MGP_CAROLIEiJ_P0061295	852 (aa)	XP_021015532	UPI000A318FD7

Gene Model

Click here to download MGP_CAROLIEiJ_G0025779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0025779	-	99	92.121	MGP_CAROLIEiJ_G0025780	-	99	92.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025779	-	99	73.536	ENSG00000137574	TGS1	99	73.536	Homo_sapiens
MGP_CAROLIEiJ_G0025779	-	65	36.913	ENSAPOG00000004321	-	99	36.425	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025779	-	99	71.948	ENSAMEG00000001781	TGS1	99	71.963	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025779	-	96	37.266	ENSAOCG00000022799	lyn	96	36.860	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025779	-	76	40.816	ENSAPEG00000019723	TGS1	96	40.902	Amphiprion_percula
MGP_CAROLIEiJ_G0025779	-	91	33.902	ENSATEG00000005927	lyn	91	34.096	Anabas_testudineus
MGP_CAROLIEiJ_G0025779	-	77	48.515	ENSAPLG00000006073	-	100	48.656	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025779	-	98	47.841	ENSACAG00000017988	TGS1	92	48.451	Anolis_carolinensis
MGP_CAROLIEiJ_G0025779	-	99	67.651	ENSANAG00000035525	TGS1	99	68.123	Aotus_nancymaae
MGP_CAROLIEiJ_G0025779	-	97	39.064	ENSACLG00000000261	lyn	98	39.085	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025779	-	97	39.298	ENSAMXG00000014086	lyn	97	39.977	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025779	-	99	66.901	ENSBTAG00000005898	TGS1	99	67.606	Bos_taurus
MGP_CAROLIEiJ_G0025779	-	99	71.663	ENSCJAG00000016657	TGS1	98	71.897	Callithrix_jacchus
MGP_CAROLIEiJ_G0025779	-	99	70.540	ENSCAFG00000007011	TGS1	99	70.911	Canis_familiaris
MGP_CAROLIEiJ_G0025779	-	99	69.565	ENSCAFG00020015485	TGS1	99	69.942	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025779	-	99	65.618	ENSCHIG00000013976	TGS1	99	66.900	Capra_hircus
MGP_CAROLIEiJ_G0025779	-	99	72.216	ENSTSYG00000000171	TGS1	99	72.216	Carlito_syrichta
MGP_CAROLIEiJ_G0025779	-	95	66.215	ENSCAPG00000013732	TGS1	99	66.091	Cavia_aperea
MGP_CAROLIEiJ_G0025779	-	99	69.565	ENSCPOG00000009713	TGS1	99	69.565	Cavia_porcellus
MGP_CAROLIEiJ_G0025779	-	99	72.547	ENSCCAG00000030476	TGS1	98	72.547	Cebus_capucinus
MGP_CAROLIEiJ_G0025779	-	99	72.951	ENSCATG00000035375	TGS1	99	72.951	Cercocebus_atys
MGP_CAROLIEiJ_G0025779	-	99	70.623	ENSCLAG00000009468	TGS1	99	70.740	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025779	-	92	70.338	ENSCSAG00000014611	TGS1	99	70.338	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025779	-	99	67.719	ENSCHOG00000001462	TGS1	99	67.836	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0025779	-	98	51.635	ENSCPBG00000004958	TGS1	99	53.802	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025779	-	99	72.717	ENSCANG00000041389	TGS1	99	72.717	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025779	-	100	83.061	ENSCGRG00001019470	Tgs1	100	82.710	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025779	-	100	82.367	ENSCGRG00000008981	Tgs1	100	82.599	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025779	-	97	37.340	ENSDARG00000107511	lyn	99	72.778	Danio_rerio
MGP_CAROLIEiJ_G0025779	-	99	68.925	ENSDNOG00000008353	TGS1	99	68.808	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025779	-	99	72.931	ENSDORG00000012484	Tgs1	99	72.931	Dipodomys_ordii
MGP_CAROLIEiJ_G0025779	-	80	65.789	ENSETEG00000005126	TGS1	85	65.789	Echinops_telfairi
MGP_CAROLIEiJ_G0025779	-	92	70.729	ENSEASG00005016371	TGS1	95	70.477	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025779	-	99	72.196	ENSECAG00000019399	TGS1	99	72.079	Equus_caballus
MGP_CAROLIEiJ_G0025779	-	69	94.828	ENSEEUG00000001735	TGS1	70	94.828	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025779	-	99	71.093	ENSFCAG00000011478	TGS1	99	71.111	Felis_catus
MGP_CAROLIEiJ_G0025779	-	88	48.949	ENSFALG00000010249	TGS1	99	49.440	Ficedula_albicollis
MGP_CAROLIEiJ_G0025779	-	99	72.824	ENSFDAG00000011405	TGS1	99	72.941	Fukomys_damarensis
MGP_CAROLIEiJ_G0025779	-	98	47.938	ENSGALG00000015340	TGS1	99	48.152	Gallus_gallus
MGP_CAROLIEiJ_G0025779	-	98	51.744	ENSGAGG00000019590	TGS1	99	53.206	Gopherus_agassizii
MGP_CAROLIEiJ_G0025779	-	99	73.653	ENSGGOG00000008624	TGS1	99	73.653	Gorilla_gorilla
MGP_CAROLIEiJ_G0025779	-	69	37.418	ENSHBUG00000003518	lyn	100	37.745	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025779	-	86	81.159	ENSHGLG00000000284	TGS1	98	81.159	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025779	-	98	38.870	ENSHCOG00000014161	lyn	99	39.175	Hippocampus_comes
MGP_CAROLIEiJ_G0025779	-	98	38.546	ENSIPUG00000002294	tgs1	99	39.427	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025779	-	99	72.588	ENSSTOG00000009597	TGS1	99	72.588	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025779	-	99	72.308	ENSJJAG00000016239	Tgs1	100	71.953	Jaculus_jaculus
MGP_CAROLIEiJ_G0025779	-	96	37.879	ENSKMAG00000019371	-	97	38.435	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025779	-	98	37.500	ENSLBEG00000027341	-	98	38.355	Labrus_bergylta
MGP_CAROLIEiJ_G0025779	-	98	45.067	ENSLACG00000008074	TGS1	100	44.843	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025779	-	98	40.830	ENSLOCG00000005492	lyn	99	41.088	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025779	-	99	68.464	ENSLAFG00000015386	TGS1	99	68.464	Loxodonta_africana
MGP_CAROLIEiJ_G0025779	-	99	72.600	ENSMFAG00000029838	TGS1	99	72.834	Macaca_fascicularis
MGP_CAROLIEiJ_G0025779	-	99	72.365	ENSMMUG00000005478	TGS1	99	72.365	Macaca_mulatta
MGP_CAROLIEiJ_G0025779	-	99	72.834	ENSMNEG00000023719	TGS1	99	73.068	Macaca_nemestrina
MGP_CAROLIEiJ_G0025779	-	99	73.068	ENSMLEG00000034807	TGS1	99	73.068	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025779	-	98	38.418	ENSMAMG00000009542	TGS1	98	38.418	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025779	-	97	39.064	ENSMZEG00005015681	lyn	98	39.085	Maylandia_zebra
MGP_CAROLIEiJ_G0025779	-	84	47.005	ENSMGAG00000010966	TGS1	99	46.843	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025779	-	100	82.135	ENSMAUG00000009875	Tgs1	100	81.935	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025779	-	99	74.386	ENSMICG00000011199	TGS1	99	74.269	Microcebus_murinus
MGP_CAROLIEiJ_G0025779	-	99	78.521	ENSMOCG00000019560	Tgs1	100	78.404	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025779	-	57	46.032	ENSMMOG00000021495	lyn	70	69.406	Mola_mola
MGP_CAROLIEiJ_G0025779	-	86	61.847	ENSMODG00000009174	TGS1	98	62.013	Monodelphis_domestica
MGP_CAROLIEiJ_G0025779	-	100	97.655	ENSMUSG00000028233	Tgs1	100	97.655	Mus_musculus
MGP_CAROLIEiJ_G0025779	-	99	93.326	MGP_PahariEiJ_G0023901	-	99	92.974	Mus_pahari
MGP_CAROLIEiJ_G0025779	-	99	85.797	MGP_PahariEiJ_G0023902	-	99	85.450	Mus_pahari
MGP_CAROLIEiJ_G0025779	-	58	97.398	MGP_SPRETEiJ_G0026726	-	98	94.326	Mus_spretus
MGP_CAROLIEiJ_G0025779	-	100	97.653	MGP_SPRETEiJ_G0026727	-	100	97.653	Mus_spretus
MGP_CAROLIEiJ_G0025779	-	92	68.766	ENSMPUG00000010475	TGS1	99	69.308	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025779	-	99	69.123	ENSMLUG00000014857	TGS1	99	69.123	Myotis_lucifugus
MGP_CAROLIEiJ_G0025779	-	100	75.754	ENSNGAG00000019532	Tgs1	100	76.334	Nannospalax_galili
MGP_CAROLIEiJ_G0025779	-	99	73.068	ENSNLEG00000001101	TGS1	99	73.068	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025779	-	92	58.534	ENSMEUG00000001697	TGS1	99	59.039	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025779	-	90	64.119	ENSODEG00000002948	TGS1	100	64.119	Octodon_degus
MGP_CAROLIEiJ_G0025779	-	50	50.231	ENSONIG00000006339	lyn	97	40.165	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025779	-	88	59.062	ENSOANG00000021853	TGS1	98	59.062	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025779	-	99	72.098	ENSOCUG00000017522	TGS1	99	72.098	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025779	-	76	39.381	ENSOMEG00000020174	lyn	96	36.471	Oryzias_melastigma
MGP_CAROLIEiJ_G0025779	-	99	71.846	ENSOGAG00000012572	TGS1	99	71.846	Otolemur_garnettii
MGP_CAROLIEiJ_G0025779	-	99	66.784	ENSOARG00000014613	TGS1	99	67.368	Ovis_aries
MGP_CAROLIEiJ_G0025779	-	99	73.536	ENSPPAG00000039058	TGS1	99	73.536	Pan_paniscus
MGP_CAROLIEiJ_G0025779	-	99	70.388	ENSPPRG00000000677	TGS1	99	70.292	Panthera_pardus
MGP_CAROLIEiJ_G0025779	-	99	70.623	ENSPTIG00000005122	TGS1	99	70.526	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025779	-	99	73.419	ENSPTRG00000020262	TGS1	99	73.419	Pan_troglodytes
MGP_CAROLIEiJ_G0025779	-	99	72.951	ENSPANG00000018910	TGS1	99	72.951	Papio_anubis
MGP_CAROLIEiJ_G0025779	-	76	42.620	ENSPKIG00000005454	lyn	68	43.247	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025779	-	99	51.279	ENSPSIG00000014983	TGS1	99	52.392	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025779	-	100	82.147	ENSPEMG00000007957	Tgs1	100	82.209	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025779	-	99	61.700	ENSPCIG00000016232	TGS1	98	62.165	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025779	-	75	37.936	ENSPFOG00000001545	-	99	37.858	Poecilia_formosa
MGP_CAROLIEiJ_G0025779	-	91	34.182	ENSPREG00000012261	-	99	33.859	Poecilia_reticulata
MGP_CAROLIEiJ_G0025779	-	99	73.536	ENSPPYG00000018597	TGS1	99	73.419	Pongo_abelii
MGP_CAROLIEiJ_G0025779	-	99	66.510	ENSPCAG00000000143	TGS1	99	66.510	Procavia_capensis
MGP_CAROLIEiJ_G0025779	-	99	73.801	ENSPCOG00000013537	TGS1	99	73.684	Propithecus_coquereli
MGP_CAROLIEiJ_G0025779	-	99	66.275	ENSPVAG00000016399	TGS1	99	66.275	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025779	-	76	42.537	ENSPNYG00000023004	lyn	87	39.467	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025779	-	96	38.830	ENSPNAG00000022249	lyn	97	39.625	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025779	-	99	88.416	ENSRNOG00000008156	Tgs1	99	88.061	Rattus_norvegicus
MGP_CAROLIEiJ_G0025779	-	99	71.077	ENSRBIG00000041893	TGS1	99	71.194	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025779	-	99	72.834	ENSRROG00000035127	TGS1	99	72.834	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025779	-	95	72.039	ENSSBOG00000024469	TGS1	99	71.917	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025779	-	99	59.629	ENSSHAG00000012878	TGS1	98	60.325	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025779	-	96	38.239	ENSSFOG00015001308	tgs1	97	38.915	Scleropages_formosus
MGP_CAROLIEiJ_G0025779	-	96	35.954	ENSSMAG00000019469	lyn	96	38.219	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025779	-	89	63.777	ENSSSCG00000006251	TGS1	98	64.166	Sus_scrofa
MGP_CAROLIEiJ_G0025779	-	96	50.000	ENSTGUG00000011050	TGS1	100	50.242	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025779	-	53	67.281	ENSTRUG00000009532	lyn	66	67.907	Takifugu_rubripes
MGP_CAROLIEiJ_G0025779	-	88	37.848	ENSTNIG00000018133	lyn	99	38.868	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025779	-	84	98.276	ENSTBEG00000010953	TGS1	85	98.276	Tupaia_belangeri
MGP_CAROLIEiJ_G0025779	-	92	73.214	ENSTTRG00000017239	TGS1	99	62.837	Tursiops_truncatus
MGP_CAROLIEiJ_G0025779	-	99	71.077	ENSUAMG00000027718	TGS1	99	70.843	Ursus_americanus
MGP_CAROLIEiJ_G0025779	-	92	70.063	ENSUMAG00000009761	TGS1	99	69.811	Ursus_maritimus
MGP_CAROLIEiJ_G0025779	-	83	62.448	ENSVPAG00000001166	TGS1	87	63.282	Vicugna_pacos
MGP_CAROLIEiJ_G0025779	-	92	68.394	ENSVVUG00000017821	TGS1	99	68.302	Vulpes_vulpes
MGP_CAROLIEiJ_G0025779	-	99	44.661	ENSXETG00000005648	tgs1	99	45.069	Xenopus_tropicalis