EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0025897 (Gene tree)
Gene ID: 110292499
Gene Symbol: -
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 20430 bases
Position: chr4:34779197-34799626
Accession: 110292499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0061790	DcpS_C	PF11969.8	6.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0061792	-	522	-	MGP_CAROLIEiJ_P0061792	48 (aa)	-	UPI0001DD36BC
MGP_CAROLIEiJ_T0061791	-	355	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0061790	-	4827	-	MGP_CAROLIEiJ_P0061790	249 (aa)	-	-
MGP_CAROLIEiJ_T0061789	-	6295	-	MGP_CAROLIEiJ_P0061789	240 (aa)	XP_021015468	UPI000A3150FD

Gene Model

Click here to download MGP_CAROLIEiJ_G0025897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0025897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSG00000137074	APTX	92	93.333	Homo_sapiens
MGP_CAROLIEiJ_G0025897	-	99	60.262	ENSAPOG00000008785	aptx	97	60.262	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0025897	-	99	85.641	ENSAMEG00000007648	APTX	83	85.641	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0025897	-	99	43.408	ENSACIG00000002035	aptx	99	43.408	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0025897	-	99	60.262	ENSAOCG00000000634	aptx	97	60.262	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0025897	-	99	60.262	ENSAPEG00000017253	aptx	97	60.262	Amphiprion_percula
MGP_CAROLIEiJ_G0025897	-	99	66.667	ENSATEG00000017383	aptx	84	66.667	Anabas_testudineus
MGP_CAROLIEiJ_G0025897	-	88	64.789	ENSAPLG00000015645	APTX	68	63.889	Anas_platyrhynchos
MGP_CAROLIEiJ_G0025897	-	99	63.000	ENSACAG00000003581	APTX	81	63.000	Anolis_carolinensis
MGP_CAROLIEiJ_G0025897	-	99	90.000	ENSANAG00000030160	APTX	78	89.560	Aotus_nancymaae
MGP_CAROLIEiJ_G0025897	-	99	60.909	ENSACLG00000018887	aptx	95	60.909	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0025897	-	99	70.166	ENSAMXG00000039899	aptx	71	70.166	Astyanax_mexicanus
MGP_CAROLIEiJ_G0025897	-	99	90.164	ENSBTAG00000013947	APTX	80	90.164	Bos_taurus
MGP_CAROLIEiJ_G0025897	-	99	88.344	ENSCJAG00000007940	APTX	80	87.912	Callithrix_jacchus
MGP_CAROLIEiJ_G0025897	-	99	88.462	ENSCAFG00000001812	APTX	81	88.462	Canis_familiaris
MGP_CAROLIEiJ_G0025897	-	99	88.462	ENSCAFG00020015598	APTX	81	88.462	Canis_lupus_dingo
MGP_CAROLIEiJ_G0025897	-	99	90.659	ENSCHIG00000012896	APTX	81	90.659	Capra_hircus
MGP_CAROLIEiJ_G0025897	-	94	95.349	ENSTSYG00000003041	APTX	99	72.632	Carlito_syrichta
MGP_CAROLIEiJ_G0025897	-	99	78.151	ENSCAPG00000013470	APTX	99	78.151	Cavia_aperea
MGP_CAROLIEiJ_G0025897	-	99	91.176	ENSCPOG00000005975	APTX	99	91.176	Cavia_porcellus
MGP_CAROLIEiJ_G0025897	-	99	88.462	ENSCCAG00000036783	APTX	99	71.228	Cebus_capucinus
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSCATG00000042639	APTX	99	71.930	Cercocebus_atys
MGP_CAROLIEiJ_G0025897	-	99	91.597	ENSCLAG00000012185	APTX	99	91.597	Chinchilla_lanigera
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSCSAG00000009885	APTX	78	89.560	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0025897	-	99	76.667	ENSCPBG00000023973	APTX	79	76.667	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0025897	-	96	48.214	ENSCING00000008741	-	63	48.214	Ciona_intestinalis
MGP_CAROLIEiJ_G0025897	-	95	50.867	ENSCSAVG00000008038	-	62	50.867	Ciona_savignyi
MGP_CAROLIEiJ_G0025897	-	99	89.571	ENSCANG00000037253	APTX	99	72.632	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0025897	-	99	94.142	ENSCGRG00001000705	Aptx	99	94.142	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0025897	-	99	94.142	ENSCGRG00000014159	Aptx	99	94.142	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0025897	-	99	64.407	ENSCSEG00000009549	aptx	82	64.407	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0025897	-	99	63.682	ENSCVAG00000011942	aptx	88	63.682	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0025897	-	99	71.348	ENSDARG00000027143	aptx	74	70.556	Danio_rerio
MGP_CAROLIEiJ_G0025897	-	96	89.503	ENSDNOG00000018498	APTX	77	89.503	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0025897	-	99	91.176	ENSDORG00000002139	Aptx	99	91.176	Dipodomys_ordii
MGP_CAROLIEiJ_G0025897	-	75	40.571	FBgn0038704	CG5316	87	46.721	Drosophila_melanogaster
MGP_CAROLIEiJ_G0025897	-	75	88.889	ENSETEG00000012459	APTX	60	77.419	Echinops_telfairi
MGP_CAROLIEiJ_G0025897	-	98	58.286	ENSEBUG00000013914	aptx	75	58.286	Eptatretus_burgeri
MGP_CAROLIEiJ_G0025897	-	99	90.556	ENSEASG00005004566	APTX	81	89.560	Equus_asinus_asinus
MGP_CAROLIEiJ_G0025897	-	99	91.875	ENSECAG00000012674	APTX	75	90.659	Equus_caballus
MGP_CAROLIEiJ_G0025897	-	79	90.226	ENSEEUG00000010693	APTX	63	90.226	Erinaceus_europaeus
MGP_CAROLIEiJ_G0025897	-	99	89.375	ENSFCAG00000008728	APTX	81	88.462	Felis_catus
MGP_CAROLIEiJ_G0025897	-	99	72.928	ENSFALG00000001230	APTX	80	72.928	Ficedula_albicollis
MGP_CAROLIEiJ_G0025897	-	99	89.496	ENSFDAG00000013752	APTX	99	89.496	Fukomys_damarensis
MGP_CAROLIEiJ_G0025897	-	99	66.851	ENSGMOG00000012505	aptx	73	66.851	Gadus_morhua
MGP_CAROLIEiJ_G0025897	-	99	72.376	ENSGALG00000001954	APTX	79	72.376	Gallus_gallus
MGP_CAROLIEiJ_G0025897	-	99	69.444	ENSGAFG00000005086	aptx	82	69.444	Gambusia_affinis
MGP_CAROLIEiJ_G0025897	-	99	62.559	ENSGACG00000017887	aptx	92	62.559	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0025897	-	99	76.667	ENSGAGG00000013230	APTX	78	76.667	Gopherus_agassizii
MGP_CAROLIEiJ_G0025897	-	79	89.552	ENSGGOG00000014232	APTX	94	70.042	Gorilla_gorilla
MGP_CAROLIEiJ_G0025897	-	99	60.909	ENSHBUG00000021058	aptx	95	60.909	Haplochromis_burtoni
MGP_CAROLIEiJ_G0025897	-	99	89.076	ENSHGLG00000015093	APTX	99	89.076	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0025897	-	99	89.076	ENSHGLG00100013482	APTX	99	89.076	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0025897	-	99	65.789	ENSHCOG00000018216	aptx	75	65.789	Hippocampus_comes
MGP_CAROLIEiJ_G0025897	-	99	73.333	ENSIPUG00000017548	aptx	71	73.333	Ictalurus_punctatus
MGP_CAROLIEiJ_G0025897	-	99	90.756	ENSSTOG00000005185	APTX	99	90.756	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0025897	-	96	90.608	ENSJJAG00000015653	Aptx	71	90.608	Jaculus_jaculus
MGP_CAROLIEiJ_G0025897	-	99	57.018	ENSKMAG00000000117	aptx	96	57.018	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0025897	-	99	61.957	ENSLBEG00000021489	APTX	94	52.336	Labrus_bergylta
MGP_CAROLIEiJ_G0025897	-	99	61.215	ENSLBEG00000015353	aptx	96	60.759	Labrus_bergylta
MGP_CAROLIEiJ_G0025897	-	98	73.295	ENSLACG00000003376	APTX	66	73.295	Latimeria_chalumnae
MGP_CAROLIEiJ_G0025897	-	94	74.286	ENSLOCG00000011556	aptx	76	64.407	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0025897	-	96	91.573	ENSLAFG00000005665	APTX	79	91.573	Loxodonta_africana
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSMFAG00000043141	APTX	78	89.560	Macaca_fascicularis
MGP_CAROLIEiJ_G0025897	-	99	89.571	ENSMMUG00000007724	APTX	78	89.560	Macaca_mulatta
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSMNEG00000042341	APTX	99	71.930	Macaca_nemestrina
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSMLEG00000035137	APTX	81	89.011	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0025897	-	99	62.189	ENSMAMG00000018377	aptx	89	62.189	Mastacembelus_armatus
MGP_CAROLIEiJ_G0025897	-	99	60.909	ENSMZEG00005022621	aptx	95	60.909	Maylandia_zebra
MGP_CAROLIEiJ_G0025897	-	75	72.067	ENSMGAG00000005736	APTX	99	72.067	Meleagris_gallopavo
MGP_CAROLIEiJ_G0025897	-	99	93.724	ENSMAUG00000006039	Aptx	99	93.724	Mesocricetus_auratus
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSMICG00000006603	APTX	79	89.560	Microcebus_murinus
MGP_CAROLIEiJ_G0025897	-	100	93.750	ENSMOCG00000000869	Aptx	100	93.750	Microtus_ochrogaster
MGP_CAROLIEiJ_G0025897	-	100	71.823	ENSMMOG00000007028	aptx	82	71.823	Mola_mola
MGP_CAROLIEiJ_G0025897	-	98	63.889	ENSMODG00000003365	APTX	78	63.889	Monodelphis_domestica
MGP_CAROLIEiJ_G0025897	-	99	67.797	ENSMALG00000003828	aptx	75	67.797	Monopterus_albus
MGP_CAROLIEiJ_G0025897	-	100	98.750	ENSMUSG00000028411	Aptx	100	98.750	Mus_musculus
MGP_CAROLIEiJ_G0025897	-	100	95.109	MGP_PahariEiJ_G0024020	Aptx	83	95.109	Mus_pahari
MGP_CAROLIEiJ_G0025897	-	100	96.739	MGP_SPRETEiJ_G0026846	Aptx	81	96.739	Mus_spretus
MGP_CAROLIEiJ_G0025897	-	99	89.674	ENSMPUG00000004290	APTX	81	89.674	Mustela_putorius_furo
MGP_CAROLIEiJ_G0025897	-	99	88.889	ENSMLUG00000016081	APTX	81	88.889	Myotis_lucifugus
MGP_CAROLIEiJ_G0025897	-	99	91.213	ENSNGAG00000016314	Aptx	99	91.213	Nannospalax_galili
MGP_CAROLIEiJ_G0025897	-	99	60.455	ENSNBRG00000014199	aptx	95	60.455	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSNLEG00000032184	APTX	99	72.281	Nomascus_leucogenys
MGP_CAROLIEiJ_G0025897	-	98	74.011	ENSMEUG00000004153	APTX	78	74.011	Notamacropus_eugenii
MGP_CAROLIEiJ_G0025897	-	78	94.545	ENSOPRG00000012403	APTX	62	94.545	Ochotona_princeps
MGP_CAROLIEiJ_G0025897	-	99	74.729	ENSODEG00000000097	-	99	74.729	Octodon_degus
MGP_CAROLIEiJ_G0025897	-	99	90.756	ENSODEG00000015832	-	99	90.756	Octodon_degus
MGP_CAROLIEiJ_G0025897	-	99	59.174	ENSONIG00000014541	aptx	78	59.174	Oreochromis_niloticus
MGP_CAROLIEiJ_G0025897	-	79	81.356	ENSOANG00000009878	APTX	64	81.356	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSOCUG00000000738	-	80	89.560	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025897	-	100	90.833	ENSOCUG00000025059	-	93	90.833	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0025897	-	99	70.857	ENSORLG00000006237	aptx	81	70.857	Oryzias_latipes
MGP_CAROLIEiJ_G0025897	-	99	70.857	ENSORLG00020021478	aptx	81	70.857	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0025897	-	99	71.591	ENSORLG00015021873	aptx	90	67.526	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0025897	-	99	88.462	ENSOGAG00000005388	APTX	78	88.462	Otolemur_garnettii
MGP_CAROLIEiJ_G0025897	-	99	90.659	ENSOARG00000009598	APTX	79	90.659	Ovis_aries
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSPPAG00000030295	APTX	78	89.560	Pan_paniscus
MGP_CAROLIEiJ_G0025897	-	99	89.375	ENSPPRG00000017524	APTX	81	88.462	Panthera_pardus
MGP_CAROLIEiJ_G0025897	-	99	89.375	ENSPTIG00000020000	APTX	81	88.462	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSPTRG00000020850	APTX	99	72.632	Pan_troglodytes
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSPANG00000025301	APTX	78	89.011	Papio_anubis
MGP_CAROLIEiJ_G0025897	-	99	70.166	ENSPKIG00000013601	aptx	99	45.367	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0025897	-	99	77.473	ENSPSIG00000010521	APTX	78	77.473	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0025897	-	98	69.492	ENSPMGG00000018649	aptx	69	69.492	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0025897	-	100	93.750	ENSPEMG00000007747	Aptx	100	93.750	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0025897	-	98	57.542	ENSPMAG00000008417	aptx	68	57.542	Petromyzon_marinus
MGP_CAROLIEiJ_G0025897	-	99	73.889	ENSPCIG00000029852	APTX	78	73.889	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0025897	-	99	60.633	ENSPFOG00000005131	-	95	60.633	Poecilia_formosa
MGP_CAROLIEiJ_G0025897	-	99	60.181	ENSPFOG00000004992	aptx	95	60.181	Poecilia_formosa
MGP_CAROLIEiJ_G0025897	-	99	60.633	ENSPLAG00000007906	aptx	95	60.633	Poecilia_latipinna
MGP_CAROLIEiJ_G0025897	-	99	60.633	ENSPLAG00000007960	APTX	95	60.633	Poecilia_latipinna
MGP_CAROLIEiJ_G0025897	-	99	61.086	ENSPMEG00000018504	aptx	95	61.086	Poecilia_mexicana
MGP_CAROLIEiJ_G0025897	-	99	60.633	ENSPMEG00000019789	APTX	95	60.633	Poecilia_mexicana
MGP_CAROLIEiJ_G0025897	-	99	48.505	ENSPREG00000004375	aptx	99	48.505	Poecilia_reticulata
MGP_CAROLIEiJ_G0025897	-	99	89.560	ENSPPYG00000019142	APTX	78	89.560	Pongo_abelii
MGP_CAROLIEiJ_G0025897	-	97	96.610	ENSPCAG00000010014	APTX	68	96.610	Procavia_capensis
MGP_CAROLIEiJ_G0025897	-	99	90.659	ENSPCOG00000016780	APTX	81	90.659	Propithecus_coquereli
MGP_CAROLIEiJ_G0025897	-	99	86.243	ENSPVAG00000011468	APTX	80	86.243	Pteropus_vampyrus
MGP_CAROLIEiJ_G0025897	-	99	60.909	ENSPNYG00000007675	aptx	95	60.909	Pundamilia_nyererei
MGP_CAROLIEiJ_G0025897	-	95	67.416	ENSPNAG00000015984	aptx	78	59.330	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0025897	-	100	95.652	ENSRNOG00000006582	Aptx	84	95.652	Rattus_norvegicus
MGP_CAROLIEiJ_G0025897	-	99	94.915	ENSRBIG00000042913	APTX	73	94.915	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0025897	-	99	94.915	ENSRROG00000035395	APTX	73	94.915	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSSBOG00000025215	APTX	81	89.011	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0025897	-	98	72.778	ENSSHAG00000012205	APTX	78	72.778	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0025897	-	99	75.978	ENSSFOG00015009267	aptx	67	75.978	Scleropages_formosus
MGP_CAROLIEiJ_G0025897	-	99	59.447	ENSSMAG00000008839	aptx	93	59.447	Scophthalmus_maximus
MGP_CAROLIEiJ_G0025897	-	99	62.326	ENSSDUG00000001989	aptx	94	62.326	Seriola_dumerili
MGP_CAROLIEiJ_G0025897	-	99	59.908	ENSSLDG00000004915	aptx	93	59.908	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0025897	-	99	72.928	ENSSPUG00000008994	APTX	68	72.928	Sphenodon_punctatus
MGP_CAROLIEiJ_G0025897	-	99	66.667	ENSSPAG00000020373	aptx	89	66.667	Stegastes_partitus
MGP_CAROLIEiJ_G0025897	-	99	90.110	ENSSSCG00000011001	APTX	80	90.110	Sus_scrofa
MGP_CAROLIEiJ_G0025897	-	99	71.429	ENSTGUG00000001441	APTX	81	71.429	Taeniopygia_guttata
MGP_CAROLIEiJ_G0025897	-	99	68.539	ENSTRUG00000009794	aptx	83	68.539	Takifugu_rubripes
MGP_CAROLIEiJ_G0025897	-	99	68.539	ENSTNIG00000010570	aptx	83	68.539	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0025897	-	99	93.082	ENSTBEG00000008504	APTX	71	93.082	Tupaia_belangeri
MGP_CAROLIEiJ_G0025897	-	90	93.220	ENSTTRG00000007384	APTX	66	93.220	Tursiops_truncatus
MGP_CAROLIEiJ_G0025897	-	99	90.000	ENSUAMG00000003700	APTX	79	90.000	Ursus_americanus
MGP_CAROLIEiJ_G0025897	-	99	89.011	ENSUMAG00000005837	APTX	81	89.011	Ursus_maritimus
MGP_CAROLIEiJ_G0025897	-	94	90.698	ENSVPAG00000001297	APTX	66	90.698	Vicugna_pacos
MGP_CAROLIEiJ_G0025897	-	99	88.462	ENSVVUG00000021130	APTX	81	88.462	Vulpes_vulpes
MGP_CAROLIEiJ_G0025897	-	99	72.881	ENSXETG00000024143	aptx	70	72.881	Xenopus_tropicalis
MGP_CAROLIEiJ_G0025897	-	99	69.832	ENSXCOG00000005020	aptx	83	65.152	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0025897	-	99	70.000	ENSXMAG00000022086	aptx	81	70.000	Xiphophorus_maculatus