EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026109 (Gene tree)
Gene ID: 110293042
Gene Symbol: Rasef
Alias: RAB45
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 72107 bases
Position: chr4:66973777-67045883
Accession: 110293042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0062709	MMR_HSR1	PF01926.23	6.2e-08	1	1
MGP_CAROLIEiJ_P0062708	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0062709	-	5360	-	MGP_CAROLIEiJ_P0062709	555 (aa)	XP_021016453	UPI000A31A744
MGP_CAROLIEiJ_T0062708	-	5210	-	MGP_CAROLIEiJ_P0062708	627 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0026109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026109	Rasef	100	83.303	ENSG00000165105	RASEF	83	81.566	Homo_sapiens
MGP_CAROLIEiJ_G0026109	Rasef	99	53.136	ENSAPOG00000024369	rasef	97	53.526	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026109	Rasef	99	84.353	ENSAMEG00000009467	RASEF	83	83.802	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026109	Rasef	94	52.444	ENSACIG00000005549	rasef	83	52.496	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0026109	Rasef	92	54.095	ENSAOCG00000011464	rasef	80	53.833	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026109	Rasef	99	53.072	ENSAPEG00000003461	rasef	87	52.913	Amphiprion_percula
MGP_CAROLIEiJ_G0026109	Rasef	94	54.029	ENSATEG00000015032	rasef	86	54.286	Anabas_testudineus
MGP_CAROLIEiJ_G0026109	Rasef	99	72.679	ENSAPLG00000013969	RASEF	95	72.546	Anas_platyrhynchos
MGP_CAROLIEiJ_G0026109	Rasef	99	72.222	ENSACAG00000002155	RASEF	88	70.048	Anolis_carolinensis
MGP_CAROLIEiJ_G0026109	Rasef	100	84.381	ENSANAG00000035226	RASEF	83	82.545	Aotus_nancymaae
MGP_CAROLIEiJ_G0026109	Rasef	99	54.561	ENSACLG00000017818	rasef	87	54.286	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026109	Rasef	99	55.556	ENSAMXG00000011411	rasef	85	55.040	Astyanax_mexicanus
MGP_CAROLIEiJ_G0026109	Rasef	100	84.201	ENSBTAG00000021751	RASEF	83	82.871	Bos_taurus
MGP_CAROLIEiJ_G0026109	Rasef	100	83.513	ENSCJAG00000003547	RASEF	83	81.759	Callithrix_jacchus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.813	ENSCAFG00000001453	RASEF	74	83.306	Canis_familiaris
MGP_CAROLIEiJ_G0026109	Rasef	99	83.993	ENSCAFG00020023859	RASEF	82	83.471	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026109	Rasef	100	84.740	ENSCHIG00000020336	RASEF	99	82.504	Capra_hircus
MGP_CAROLIEiJ_G0026109	Rasef	93	83.654	ENSTSYG00000006987	RASEF	99	83.654	Carlito_syrichta
MGP_CAROLIEiJ_G0026109	Rasef	80	68.018	ENSCAPG00000010585	-	100	65.253	Cavia_aperea
MGP_CAROLIEiJ_G0026109	Rasef	100	75.719	ENSCPOG00000005004	RASEF	100	76.639	Cavia_porcellus
MGP_CAROLIEiJ_G0026109	Rasef	100	84.022	ENSCCAG00000031624	RASEF	83	81.892	Cebus_capucinus
MGP_CAROLIEiJ_G0026109	Rasef	99	46.524	ENSCLAG00000004622	-	99	46.524	Chinchilla_lanigera
MGP_CAROLIEiJ_G0026109	Rasef	100	83.303	ENSCSAG00000007663	RASEF	83	81.403	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026109	Rasef	94	80.460	ENSCHOG00000001831	RASEF	95	78.984	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026109	Rasef	99	71.864	ENSCPBG00000019037	RASEF	97	70.847	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026109	Rasef	100	82.585	ENSCANG00000034081	RASEF	83	80.750	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026109	Rasef	100	92.446	ENSCGRG00001001324	Rasef	100	92.386	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026109	Rasef	100	92.446	ENSCGRG00000006455	Rasef	100	92.446	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026109	Rasef	89	49.806	ENSCSEG00000017898	rasef	81	48.382	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026109	Rasef	99	54.671	ENSCVAG00000006168	rasef	76	54.088	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026109	Rasef	100	53.726	ENSDARG00000076250	rasef	86	53.365	Danio_rerio
MGP_CAROLIEiJ_G0026109	Rasef	100	83.483	ENSDNOG00000006002	RASEF	74	83.003	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026109	Rasef	98	84.672	ENSDORG00000015570	Rasef	100	84.644	Dipodomys_ordii
MGP_CAROLIEiJ_G0026109	Rasef	99	49.556	ENSEBUG00000012629	rasef	84	48.534	Eptatretus_burgeri
MGP_CAROLIEiJ_G0026109	Rasef	99	39.794	ENSEBUG00000012179	rasef	99	38.889	Eptatretus_burgeri
MGP_CAROLIEiJ_G0026109	Rasef	99	82.734	ENSEASG00005015967	RASEF	98	82.857	Equus_asinus_asinus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.094	ENSECAG00000000324	RASEF	98	83.054	Equus_caballus
MGP_CAROLIEiJ_G0026109	Rasef	94	67.625	ENSEEUG00000008455	RASEF	100	68.984	Erinaceus_europaeus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.273	ENSFCAG00000002416	RASEF	83	81.699	Felis_catus
MGP_CAROLIEiJ_G0026109	Rasef	99	73.477	ENSFALG00000003611	RASEF	99	73.289	Ficedula_albicollis
MGP_CAROLIEiJ_G0026109	Rasef	100	81.149	ENSFDAG00000013428	RASEF	100	81.544	Fukomys_damarensis
MGP_CAROLIEiJ_G0026109	Rasef	94	53.396	ENSFHEG00000022470	rasef	79	52.551	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026109	Rasef	94	51.724	ENSGMOG00000010090	rasef	84	53.391	Gadus_morhua
MGP_CAROLIEiJ_G0026109	Rasef	99	72.451	ENSGALG00000012576	RASEF	85	71.429	Gallus_gallus
MGP_CAROLIEiJ_G0026109	Rasef	99	53.509	ENSGAFG00000013735	rasef	86	52.707	Gambusia_affinis
MGP_CAROLIEiJ_G0026109	Rasef	99	55.477	ENSGACG00000007528	rasef	86	55.122	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026109	Rasef	99	72.352	ENSGAGG00000007338	RASEF	99	71.429	Gopherus_agassizii
MGP_CAROLIEiJ_G0026109	Rasef	100	83.124	ENSGGOG00000006651	RASEF	83	81.403	Gorilla_gorilla
MGP_CAROLIEiJ_G0026109	Rasef	99	54.389	ENSHBUG00000010345	rasef	75	54.127	Haplochromis_burtoni
MGP_CAROLIEiJ_G0026109	Rasef	100	81.867	ENSHGLG00000000399	RASEF	84	80.000	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026109	Rasef	100	81.867	ENSHGLG00100008043	RASEF	100	82.047	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026109	Rasef	99	48.387	ENSHCOG00000010976	rasef	84	48.270	Hippocampus_comes
MGP_CAROLIEiJ_G0026109	Rasef	99	53.578	ENSIPUG00000008768	rasef	85	52.932	Ictalurus_punctatus
MGP_CAROLIEiJ_G0026109	Rasef	100	83.662	ENSSTOG00000004311	RASEF	82	82.838	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026109	Rasef	100	82.648	ENSJJAG00000023215	Rasef	100	82.776	Jaculus_jaculus
MGP_CAROLIEiJ_G0026109	Rasef	99	52.261	ENSKMAG00000021106	rasef	78	51.282	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026109	Rasef	99	49.734	ENSLBEG00000021098	-	85	50.492	Labrus_bergylta
MGP_CAROLIEiJ_G0026109	Rasef	99	67.082	ENSLACG00000010849	RASEF	86	67.047	Latimeria_chalumnae
MGP_CAROLIEiJ_G0026109	Rasef	99	65.288	ENSLOCG00000002094	rasef	89	63.091	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0026109	Rasef	100	82.554	ENSLAFG00000010552	RASEF	100	82.383	Loxodonta_africana
MGP_CAROLIEiJ_G0026109	Rasef	100	82.944	ENSMFAG00000046414	RASEF	82	82.013	Macaca_fascicularis
MGP_CAROLIEiJ_G0026109	Rasef	100	83.124	ENSMNEG00000044341	RASEF	83	81.240	Macaca_nemestrina
MGP_CAROLIEiJ_G0026109	Rasef	100	82.765	ENSMLEG00000034579	RASEF	83	80.914	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026109	Rasef	82	53.862	ENSMAMG00000001536	rasef	82	53.977	Mastacembelus_armatus
MGP_CAROLIEiJ_G0026109	Rasef	94	51.692	ENSMZEG00005004819	rasef	82	52.098	Maylandia_zebra
MGP_CAROLIEiJ_G0026109	Rasef	100	93.525	ENSMAUG00000010820	Rasef	100	93.445	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026109	Rasef	100	82.975	ENSMICG00000011836	RASEF	82	82.537	Microcebus_murinus
MGP_CAROLIEiJ_G0026109	Rasef	100	92.986	ENSMOCG00000000943	Rasef	100	92.986	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026109	Rasef	97	51.351	ENSMMOG00000000102	rasef	85	49.918	Mola_mola
MGP_CAROLIEiJ_G0026109	Rasef	100	77.419	ENSMODG00000009037	RASEF	82	76.936	Monodelphis_domestica
MGP_CAROLIEiJ_G0026109	Rasef	99	53.765	ENSMALG00000009830	rasef	87	53.710	Monopterus_albus
MGP_CAROLIEiJ_G0026109	Rasef	100	99.099	ENSMUSG00000043003	Rasef	100	99.099	Mus_musculus
MGP_CAROLIEiJ_G0026109	Rasef	100	97.477	MGP_PahariEiJ_G0028447	Rasef	100	97.477	Mus_pahari
MGP_CAROLIEiJ_G0026109	Rasef	100	98.919	MGP_SPRETEiJ_G0027075	Rasef	100	98.919	Mus_spretus
MGP_CAROLIEiJ_G0026109	Rasef	99	81.227	ENSMPUG00000013070	RASEF	99	81.227	Mustela_putorius_furo
MGP_CAROLIEiJ_G0026109	Rasef	100	81.115	ENSMLUG00000013108	RASEF	82	80.496	Myotis_lucifugus
MGP_CAROLIEiJ_G0026109	Rasef	100	85.458	ENSNGAG00000014878	Rasef	100	85.458	Nannospalax_galili
MGP_CAROLIEiJ_G0026109	Rasef	94	50.652	ENSNBRG00000012335	rasef	83	51.127	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026109	Rasef	100	83.124	ENSNLEG00000003245	RASEF	83	81.403	Nomascus_leucogenys
MGP_CAROLIEiJ_G0026109	Rasef	100	74.552	ENSMEUG00000016412	RASEF	82	73.641	Notamacropus_eugenii
MGP_CAROLIEiJ_G0026109	Rasef	100	67.145	ENSOPRG00000002742	-	81	68.289	Ochotona_princeps
MGP_CAROLIEiJ_G0026109	Rasef	50	61.786	ENSODEG00000002594	-	99	61.786	Octodon_degus
MGP_CAROLIEiJ_G0026109	Rasef	99	54.152	ENSONIG00000015021	rasef	81	56.649	Oreochromis_niloticus
MGP_CAROLIEiJ_G0026109	Rasef	100	71.804	ENSOANG00000010379	RASEF	81	72.504	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0026109	Rasef	100	81.688	ENSOCUG00000001548	RASEF	82	80.693	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026109	Rasef	99	54.059	ENSORLG00000005076	rasef	75	54.299	Oryzias_latipes
MGP_CAROLIEiJ_G0026109	Rasef	99	53.276	ENSORLG00020020049	rasef	75	53.577	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026109	Rasef	99	53.886	ENSORLG00015008479	rasef	75	53.822	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026109	Rasef	99	53.726	ENSOMEG00000023457	rasef	85	55.387	Oryzias_melastigma
MGP_CAROLIEiJ_G0026109	Rasef	99	83.633	ENSOGAG00000012724	RASEF	99	83.725	Otolemur_garnettii
MGP_CAROLIEiJ_G0026109	Rasef	100	84.201	ENSOARG00000009073	RASEF	78	82.871	Ovis_aries
MGP_CAROLIEiJ_G0026109	Rasef	100	83.483	ENSPPAG00000042152	RASEF	86	81.566	Pan_paniscus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.453	ENSPPRG00000008487	RASEF	83	81.863	Panthera_pardus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.453	ENSPTIG00000006676	RASEF	98	81.214	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026109	Rasef	100	83.303	ENSPTRG00000021052	RASEF	86	81.403	Pan_troglodytes
MGP_CAROLIEiJ_G0026109	Rasef	100	82.765	ENSPANG00000024899	RASEF	82	81.848	Papio_anubis
MGP_CAROLIEiJ_G0026109	Rasef	99	70.430	ENSPSIG00000017699	RASEF	99	69.329	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026109	Rasef	99	44.563	ENSPMGG00000015499	rasef	90	83.019	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026109	Rasef	100	93.705	ENSPEMG00000002797	Rasef	100	93.705	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026109	Rasef	94	48.364	ENSPMAG00000001634	rasef	84	46.870	Petromyzon_marinus
MGP_CAROLIEiJ_G0026109	Rasef	100	78.136	ENSPCIG00000027655	RASEF	82	77.100	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026109	Rasef	99	53.136	ENSPFOG00000018924	rasef	82	53.420	Poecilia_formosa
MGP_CAROLIEiJ_G0026109	Rasef	99	51.504	ENSPLAG00000022907	RASEF	97	52.080	Poecilia_latipinna
MGP_CAROLIEiJ_G0026109	Rasef	99	53.684	ENSPMEG00000006546	rasef	88	52.716	Poecilia_mexicana
MGP_CAROLIEiJ_G0026109	Rasef	99	53.509	ENSPREG00000018728	rasef	75	52.707	Poecilia_reticulata
MGP_CAROLIEiJ_G0026109	Rasef	100	83.303	ENSPPYG00000019320	RASEF	83	81.566	Pongo_abelii
MGP_CAROLIEiJ_G0026109	Rasef	100	83.513	ENSPCOG00000022979	RASEF	82	83.196	Propithecus_coquereli
MGP_CAROLIEiJ_G0026109	Rasef	100	82.585	ENSPVAG00000003682	RASEF	82	82.013	Pteropus_vampyrus
MGP_CAROLIEiJ_G0026109	Rasef	98	50.360	ENSPNYG00000010579	rasef	83	50.413	Pundamilia_nyererei
MGP_CAROLIEiJ_G0026109	Rasef	99	53.114	ENSPNAG00000016447	rasef	88	52.462	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026109	Rasef	100	89.748	ENSRNOG00000024190	Rasef	86	88.177	Rattus_norvegicus
MGP_CAROLIEiJ_G0026109	Rasef	100	82.765	ENSRBIG00000039516	RASEF	82	81.848	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026109	Rasef	94	83.365	ENSRROG00000044397	RASEF	81	82.343	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026109	Rasef	100	83.842	ENSSBOG00000029298	RASEF	83	82.055	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026109	Rasef	100	65.295	ENSSFOG00015009014	rasef	86	63.902	Scleropages_formosus
MGP_CAROLIEiJ_G0026109	Rasef	99	50.594	ENSSMAG00000000942	rasef	88	50.698	Scophthalmus_maximus
MGP_CAROLIEiJ_G0026109	Rasef	82	52.071	ENSSDUG00000022228	rasef	78	52.367	Seriola_dumerili
MGP_CAROLIEiJ_G0026109	Rasef	99	51.384	ENSSLDG00000001784	rasef	68	51.104	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026109	Rasef	99	67.742	ENSSPUG00000002899	RASEF	86	68.534	Sphenodon_punctatus
MGP_CAROLIEiJ_G0026109	Rasef	99	52.349	ENSSPAG00000002442	rasef	76	52.403	Stegastes_partitus
MGP_CAROLIEiJ_G0026109	Rasef	100	83.842	ENSSSCG00000040707	-	92	83.333	Sus_scrofa
MGP_CAROLIEiJ_G0026109	Rasef	99	73.477	ENSTGUG00000003216	RASEF	88	70.886	Taeniopygia_guttata
MGP_CAROLIEiJ_G0026109	Rasef	99	53.265	ENSTRUG00000011541	rasef	88	51.777	Takifugu_rubripes
MGP_CAROLIEiJ_G0026109	Rasef	99	54.466	ENSTNIG00000006010	rasef	82	53.710	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026109	Rasef	100	74.552	ENSTTRG00000002061	RASEF	82	74.959	Tursiops_truncatus
MGP_CAROLIEiJ_G0026109	Rasef	99	84.353	ENSUAMG00000021591	RASEF	97	84.396	Ursus_americanus
MGP_CAROLIEiJ_G0026109	Rasef	99	84.532	ENSUMAG00000004670	RASEF	98	82.714	Ursus_maritimus
MGP_CAROLIEiJ_G0026109	Rasef	99	83.453	ENSVVUG00000029736	RASEF	97	83.697	Vulpes_vulpes
MGP_CAROLIEiJ_G0026109	Rasef	99	69.875	ENSXETG00000016758	mgc147600	84	69.344	Xenopus_tropicalis
MGP_CAROLIEiJ_G0026109	Rasef	100	47.711	ENSXCOG00000005178	rasef	87	48.259	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0026109	Rasef	99	52.982	ENSXMAG00000015129	rasef	87	52.989	Xiphophorus_maculatus