EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026185 (Gene tree)
Gene ID: 110293370
Gene Symbol: L1td1
Alias: -
Full Name: LINE1 type transposase domain containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 11815 bases
Position: chr4:90847969-90859783
Accession: 110293370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0063061	Transposase_22	PF02994.14	1.1e-21	1	1
MGP_CAROLIEiJ_P0063063	Transposase_22	PF02994.14	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0063063	-	2658	XM_021161213	MGP_CAROLIEiJ_P0063063	845 (aa)	XP_021016872	A0A088QCN9
MGP_CAROLIEiJ_T0063062	-	447	-	MGP_CAROLIEiJ_P0063062	119 (aa)	-	-
MGP_CAROLIEiJ_T0063061	-	2966	-	MGP_CAROLIEiJ_P0063061	794 (aa)	-	-
MGP_CAROLIEiJ_T0063060	-	707	-	MGP_CAROLIEiJ_P0063060	151 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0026185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026185	L1td1	54	54.444	ENSG00000240563	L1TD1	60	51.064	Homo_sapiens
MGP_CAROLIEiJ_G0026185	L1td1	82	56.985	ENSCJAG00000038509	L1TD1	90	56.985	Callithrix_jacchus
MGP_CAROLIEiJ_G0026185	L1td1	83	56.919	ENSCAFG00020012951	L1TD1	91	56.919	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026185	L1td1	51	40.164	ENSCANG00000042261	L1TD1	60	51.185	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026185	L1td1	99	68.408	ENSCGRG00001024238	L1td1	97	75.650	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026185	L1td1	99	68.408	ENSCGRG00000011853	L1td1	97	75.650	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026185	L1td1	99	37.884	ENSDNOG00000040097	-	53	47.076	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026185	L1td1	99	40.771	ENSDNOG00000039645	-	91	47.332	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026185	L1td1	99	43.025	ENSEASG00005008811	L1TD1	93	52.674	Equus_asinus_asinus
MGP_CAROLIEiJ_G0026185	L1td1	99	43.771	ENSECAG00000013248	L1TD1	53	51.522	Equus_caballus
MGP_CAROLIEiJ_G0026185	L1td1	52	38.596	ENSECAG00000003335	-	96	38.596	Equus_caballus
MGP_CAROLIEiJ_G0026185	L1td1	88	51.157	ENSFCAG00000042658	L1TD1	51	52.304	Felis_catus
MGP_CAROLIEiJ_G0026185	L1td1	54	53.911	ENSGGOG00000026365	L1TD1	61	50.594	Gorilla_gorilla
MGP_CAROLIEiJ_G0026185	L1td1	99	69.678	ENSMAUG00000020769	L1td1	95	78.974	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026185	L1td1	50	77.667	ENSMOCG00000007037	L1td1	51	78.947	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026185	L1td1	100	92.616	ENSMUSG00000087166	L1td1	100	92.115	Mus_musculus
MGP_CAROLIEiJ_G0026185	L1td1	100	90.864	MGP_SPRETEiJ_G0027153	L1td1	100	90.363	Mus_spretus
MGP_CAROLIEiJ_G0026185	L1td1	99	50.545	ENSNGAG00000000776	L1td1	52	64.767	Nannospalax_galili
MGP_CAROLIEiJ_G0026185	L1td1	56	53.889	ENSPPAG00000043606	L1TD1	64	50.591	Pan_paniscus
MGP_CAROLIEiJ_G0026185	L1td1	50	50.448	ENSPPRG00000011113	L1TD1	50	52.304	Panthera_pardus
MGP_CAROLIEiJ_G0026185	L1td1	56	53.889	ENSPTRG00000034387	L1TD1	64	50.591	Pan_troglodytes
MGP_CAROLIEiJ_G0026185	L1td1	91	79.427	ENSPEMG00000008068	L1td1	95	79.427	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026185	L1td1	99	43.057	ENSPPYG00000001286	L1TD1	95	50.711	Pongo_abelii
MGP_CAROLIEiJ_G0026185	L1td1	99	43.171	ENSRBIG00000005782	L1TD1	60	50.711	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026185	L1td1	74	55.369	ENSTBEG00000015274	L1TD1	84	55.369	Tupaia_belangeri
MGP_CAROLIEiJ_G0026185	L1td1	82	57.641	ENSUMAG00000014924	L1TD1	96	57.360	Ursus_maritimus