EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0026453 (Gene tree)
Gene ID
-
Gene Symbol
Yrdc
Alias
IRIP
Full Name
yrdC domain containing (E.coli)
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
4936 bases
Position
chr4:114622764-114627699
Accession
2387201
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0064320Sua5_yciO_yrdCPF01300.181.6e-4311
MGP_CAROLIEiJ_P0064321Sua5_yciO_yrdCPF01300.185.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0064321-730-MGP_CAROLIEiJ_P0064321105 (aa)--
MGP_CAROLIEiJ_T0064320-1635-MGP_CAROLIEiJ_P0064320280 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0026453's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026453's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSG00000196449YRDC9186.328Homo_sapiens
MGP_CAROLIEiJ_G0026453Yrdc9769.608ENSAPOG00000024293yrdc7063.830Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSAMEG00000001173YRDC8988.623Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026453Yrdc9869.903ENSACIG00000017330yrdc6965.426Amphilophus_citrinellus
MGP_CAROLIEiJ_G0026453Yrdc9769.608ENSAOCG00000021647yrdc7064.362Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026453Yrdc9769.608ENSAPEG00000006164yrdc7064.362Amphiprion_percula
MGP_CAROLIEiJ_G0026453Yrdc9768.627ENSATEG00000010086yrdc6964.894Anabas_testudineus
MGP_CAROLIEiJ_G0026453Yrdc9871.845ENSACAG00000017203YRDC9264.467Anolis_carolinensis
MGP_CAROLIEiJ_G0026453Yrdc9888.350ENSANAG00000031052-8978.175Aotus_nancymaae
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSANAG00000028788-8387.437Aotus_nancymaae
MGP_CAROLIEiJ_G0026453Yrdc9770.588ENSACLG00000027775yrdc7860.094Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026453Yrdc9867.961ENSAMXG00000037791yrdc8559.524Astyanax_mexicanus
MGP_CAROLIEiJ_G0026453Yrdc9895.146ENSBTAG00000006510YRDC9979.570Bos_taurus
MGP_CAROLIEiJ_G0026453Yrdc9838.462WBGene00012997Y48C3A.189037.089Caenorhabditis_elegans
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSCJAG00000002078YRDC7086.328Callithrix_jacchus
MGP_CAROLIEiJ_G0026453Yrdc9887.379ENSCAFG00000003253YRDC9973.214Canis_familiaris
MGP_CAROLIEiJ_G0026453Yrdc9887.379ENSCAFG00020007843YRDC9975.357Canis_lupus_dingo
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSCHIG00000007882YRDC9979.570Capra_hircus
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSTSYG00000005555YRDC6281.609Carlito_syrichta
MGP_CAROLIEiJ_G0026453Yrdc9890.291ENSCPOG00000036144YRDC10080.000Cavia_porcellus
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSCCAG00000028891YRDC9186.328Cebus_capucinus
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSCATG00000036928YRDC9185.156Cercocebus_atys
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSCLAG00000015012YRDC10082.857Chinchilla_lanigera
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSCSAG00000001116YRDC9185.156Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026453Yrdc7582.297ENSCHOG00000005500YRDC10082.297Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026453Yrdc9873.786ENSCPBG00000018446YRDC8268.750Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026453Yrdc9749.533ENSCING00000007564-9047.716Ciona_intestinalis
MGP_CAROLIEiJ_G0026453Yrdc9749.533ENSCSAVG00000009982-9047.179Ciona_savignyi
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSCANG00000031111YRDC9185.992Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSCGRG00001000829-7780.576Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026453Yrdc9895.146ENSCGRG00001014496-10087.143Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026453Yrdc9895.146ENSCGRG00000001307-10081.890Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026453Yrdc9769.608ENSCSEG00000019075yrdc6963.212Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026453Yrdc9865.049ENSCVAG00000017355yrdc8056.744Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026453Yrdc9863.107ENSDARG00000041428yrdc8857.746Danio_rerio
MGP_CAROLIEiJ_G0026453Yrdc9867.619ENSDNOG00000036198-8860.440Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSDNOG00000038789-10084.766Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSDORG00000008788Yrdc8783.249Dipodomys_ordii
MGP_CAROLIEiJ_G0026453Yrdc9853.333FBgn0061361CG337867649.474Drosophila_melanogaster
MGP_CAROLIEiJ_G0026453Yrdc8389.655ENSETEG00000003442YRDC10067.143Echinops_telfairi
MGP_CAROLIEiJ_G0026453Yrdc9756.863ENSEBUG00000014080yrdc7855.556Eptatretus_burgeri
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSEASG00005012253YRDC9980.645Equus_asinus_asinus
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSECAG00000022522YRDC9981.004Equus_caballus
MGP_CAROLIEiJ_G0026453Yrdc9871.845ENSELUG00000018071yrdc6861.905Esox_lucius
MGP_CAROLIEiJ_G0026453Yrdc9889.320ENSFCAG00000011018YRDC10080.714Felis_catus
MGP_CAROLIEiJ_G0026453Yrdc6931.429ENSFALG00000011333-5331.429Ficedula_albicollis
MGP_CAROLIEiJ_G0026453Yrdc9881.553ENSFALG00000000964YRDC8175.141Ficedula_albicollis
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSFDAG00000016507-9894.175Fukomys_damarensis
MGP_CAROLIEiJ_G0026453Yrdc9866.990ENSFHEG00000001029yrdc9654.694Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026453Yrdc9869.903ENSGMOG00000015635yrdc8965.426Gadus_morhua
MGP_CAROLIEiJ_G0026453Yrdc9878.641ENSGALG00000029001YRDC8069.378Gallus_gallus
MGP_CAROLIEiJ_G0026453Yrdc6831.863ENSGALG00000025899-6531.863Gallus_gallus
MGP_CAROLIEiJ_G0026453Yrdc9864.078ENSGAFG00000008396yrdc7956.279Gambusia_affinis
MGP_CAROLIEiJ_G0026453Yrdc9766.667ENSGACG00000013878yrdc7861.053Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026453Yrdc9875.728ENSGAGG00000014968YRDC8669.192Gopherus_agassizii
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSGGOG00000007619YRDC9186.328Gorilla_gorilla
MGP_CAROLIEiJ_G0026453Yrdc9771.569ENSHBUG00000009298yrdc7860.563Haplochromis_burtoni
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSHGLG00000014075YRDC10082.857Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSHGLG00100002734YRDC10073.214Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026453Yrdc9863.107ENSHCOG00000006598yrdc8258.571Hippocampus_comes
MGP_CAROLIEiJ_G0026453Yrdc9866.990ENSIPUG00000014985yrdc8558.852Ictalurus_punctatus
MGP_CAROLIEiJ_G0026453Yrdc9896.117ENSSTOG00000001643YRDC9981.362Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026453Yrdc9896.117ENSJJAG00000023117-9896.117Jaculus_jaculus
MGP_CAROLIEiJ_G0026453Yrdc9770.588ENSKMAG00000013468yrdc7860.094Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026453Yrdc9870.874ENSLBEG00000027501yrdc7859.624Labrus_bergylta
MGP_CAROLIEiJ_G0026453Yrdc7330.837ENSLACG00000017624si:ch211-153b23.36630.837Latimeria_chalumnae
MGP_CAROLIEiJ_G0026453Yrdc9873.786ENSLACG00000010689YRDC8866.316Latimeria_chalumnae
MGP_CAROLIEiJ_G0026453Yrdc9871.845ENSLOCG00000003321yrdc7964.767Lepisosteus_oculatus
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSLAFG00000017556YRDC10078.929Loxodonta_africana
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSMFAG00000003487YRDC9982.381Macaca_fascicularis
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSMMUG00000005372YRDC6885.156Macaca_mulatta
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSMNEG00000029348YRDC9185.156Macaca_nemestrina
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSMLEG00000041122YRDC8488.976Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026453Yrdc9866.990ENSMAMG00000007315yrdc7461.692Mastacembelus_armatus
MGP_CAROLIEiJ_G0026453Yrdc9770.588ENSMZEG00005006948yrdc7860.094Maylandia_zebra
MGP_CAROLIEiJ_G0026453Yrdc6932.227ENSMGAG00000005489-5332.227Meleagris_gallopavo
MGP_CAROLIEiJ_G0026453Yrdc9878.641ENSMGAG00000002833YRDC9071.739Meleagris_gallopavo
MGP_CAROLIEiJ_G0026453Yrdc9896.117ENSMAUG00000003715-9896.117Mesocricetus_auratus
MGP_CAROLIEiJ_G0026453Yrdc9895.146ENSMICG00000031688YRDC10081.004Microcebus_murinus
MGP_CAROLIEiJ_G0026453Yrdc7591.388ENSMOCG00000000164-8191.388Microtus_ochrogaster
MGP_CAROLIEiJ_G0026453Yrdc9768.627ENSMMOG00000002119yrdc7859.434Mola_mola
MGP_CAROLIEiJ_G0026453Yrdc9887.379ENSMODG00000017750YRDC9866.904Monodelphis_domestica
MGP_CAROLIEiJ_G0026453Yrdc9870.874ENSMALG00000012471yrdc7860.190Monopterus_albus
MGP_CAROLIEiJ_G0026453Yrdc9899.029ENSMUSG00000028889Yrdc9899.029Mus_musculus
MGP_CAROLIEiJ_G0026453Yrdc9898.058MGP_PahariEiJ_G0028784Yrdc9898.058Mus_pahari
MGP_CAROLIEiJ_G0026453Yrdc9899.029MGP_SPRETEiJ_G0027432Yrdc9997.630Mus_spretus
MGP_CAROLIEiJ_G0026453Yrdc9890.291ENSMPUG00000014542YRDC7987.374Mustela_putorius_furo
MGP_CAROLIEiJ_G0026453Yrdc9876.699ENSMLUG00000028796-9163.019Myotis_lucifugus
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSMLUG00000000955-9184.766Myotis_lucifugus
MGP_CAROLIEiJ_G0026453Yrdc9887.379ENSMLUG00000024310-8781.461Myotis_lucifugus
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSNGAG00000019099Yrdc10078.214Nannospalax_galili
MGP_CAROLIEiJ_G0026453Yrdc9771.569ENSNBRG00000009475yrdc7860.094Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSNLEG00000011665YRDC9980.216Nomascus_leucogenys
MGP_CAROLIEiJ_G0026453Yrdc9889.320ENSMEUG00000005068YRDC10077.674Notamacropus_eugenii
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSODEG00000007401YRDC9893.204Octodon_degus
MGP_CAROLIEiJ_G0026453Yrdc9870.874ENSONIG00000016213yrdc8860.563Oreochromis_niloticus
MGP_CAROLIEiJ_G0026453Yrdc8381.609ENSOANG00000002048-6881.609Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSOCUG00000005384YRDC9681.786Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026453Yrdc9764.706ENSORLG00000014393yrdc6960.106Oryzias_latipes
MGP_CAROLIEiJ_G0026453Yrdc9764.706ENSORLG00020019663yrdc8055.607Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026453Yrdc9764.706ENSORLG00015004625yrdc8055.140Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026453Yrdc9764.706ENSOMEG00000018550yrdc8653.947Oryzias_melastigma
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSOGAG00000030474YRDC9385.547Otolemur_garnettii
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSOARG00000019873YRDC9577.612Ovis_aries
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSPPAG00000039722-8490.400Pan_paniscus
MGP_CAROLIEiJ_G0026453Yrdc9890.291ENSPPRG00000007752YRDC10081.071Panthera_pardus
MGP_CAROLIEiJ_G0026453Yrdc9890.291ENSPTIG00000019821YRDC6874.684Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSPTRG00000000557YRDC9186.719Pan_troglodytes
MGP_CAROLIEiJ_G0026453Yrdc9892.233ENSPANG00000006487YRDC6985.156Papio_anubis
MGP_CAROLIEiJ_G0026453Yrdc9867.961ENSPKIG00000004574yrdc7261.500Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026453Yrdc9874.757ENSPSIG00000006483YRDC8360.759Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026453Yrdc9867.961ENSPMGG00000004184yrdc7262.766Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026453Yrdc9895.146ENSPEMG00000016985Yrdc9074.324Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026453Yrdc9855.769ENSPMAG00000002905yrdc9657.303Petromyzon_marinus
MGP_CAROLIEiJ_G0026453Yrdc9889.320ENSPCIG00000025731YRDC9573.930Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026453Yrdc9866.019ENSPFOG00000023097yrdc7956.744Poecilia_formosa
MGP_CAROLIEiJ_G0026453Yrdc9865.049ENSPLAG00000020882yrdc7956.279Poecilia_latipinna
MGP_CAROLIEiJ_G0026453Yrdc9866.019ENSPMEG00000013237yrdc8056.744Poecilia_mexicana
MGP_CAROLIEiJ_G0026453Yrdc9866.019ENSPREG00000005285yrdc7956.744Poecilia_reticulata
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSPPYG00000001523-8886.977Pongo_abelii
MGP_CAROLIEiJ_G0026453Yrdc9887.379ENSPCAG00000016850YRDC9182.422Procavia_capensis
MGP_CAROLIEiJ_G0026453Yrdc9896.117ENSPCOG00000013214YRDC9980.645Propithecus_coquereli
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSPVAG00000010147YRDC9285.938Pteropus_vampyrus
MGP_CAROLIEiJ_G0026453Yrdc9771.569ENSPNYG00000013956yrdc7860.563Pundamilia_nyererei
MGP_CAROLIEiJ_G0026453Yrdc9868.932ENSPNAG00000015625yrdc7962.371Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026453Yrdc9898.058ENSRNOG00000025424Yrdc10091.071Rattus_norvegicus
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSRBIG00000032289YRDC9185.603Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSRROG00000039370YRDC6490.909Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026453Yrdc9894.175ENSSBOG00000018937YRDC8682.587Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026453Yrdc9886.408ENSSHAG00000013957-8685.156Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026453Yrdc9869.903ENSSFOG00015006128yrdc8164.550Scleropages_formosus
MGP_CAROLIEiJ_G0026453Yrdc9870.874ENSSMAG00000005195yrdc7363.265Scophthalmus_maximus
MGP_CAROLIEiJ_G0026453Yrdc6731.884ENSSDUG00000006736-9031.818Seriola_dumerili
MGP_CAROLIEiJ_G0026453Yrdc5730.409ENSSDUG00000006631-6730.409Seriola_dumerili
MGP_CAROLIEiJ_G0026453Yrdc9768.627ENSSDUG00000009775yrdc7959.624Seriola_dumerili
MGP_CAROLIEiJ_G0026453Yrdc9768.627ENSSLDG00000003196yrdc7959.624Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026453Yrdc9874.757ENSSPUG00000003946YRDC9158.848Sphenodon_punctatus
MGP_CAROLIEiJ_G0026453Yrdc9866.019ENSSPAG00000012559yrdc7857.277Stegastes_partitus
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSSSCG00000040425YRDC9286.328Sus_scrofa
MGP_CAROLIEiJ_G0026453Yrdc9881.553ENSTGUG00000001507YRDC8680.159Taeniopygia_guttata
MGP_CAROLIEiJ_G0026453Yrdc9860.194ENSTRUG00000005923yrdc6759.474Takifugu_rubripes
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSTBEG00000008863YRDC9690.000Tupaia_belangeri
MGP_CAROLIEiJ_G0026453Yrdc9893.204ENSTTRG00000013538-8489.600Tursiops_truncatus
MGP_CAROLIEiJ_G0026453Yrdc9891.262ENSUAMG00000006150YRDC9089.071Ursus_americanus
MGP_CAROLIEiJ_G0026453Yrdc8394.253ENSVPAG00000006642YRDC9473.394Vicugna_pacos
MGP_CAROLIEiJ_G0026453Yrdc9888.350ENSVVUG00000023132-5075.658Vulpes_vulpes
MGP_CAROLIEiJ_G0026453Yrdc9874.757ENSXETG00000014420yrdc9063.084Xenopus_tropicalis
MGP_CAROLIEiJ_G0026453Yrdc9864.078ENSXCOG00000000829yrdc8955.814Xiphophorus_couchianus
MGP_CAROLIEiJ_G0026453Yrdc9862.136ENSXMAG00000014606yrdc7554.884Xiphophorus_maculatus

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